RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
MDC1-205ENST00000425072 RPL13P26373 211 aaKnown RBP11.38□□□□□ -0.59
MDC1-205ENST00000425072 NPTX2P47972 431 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 EFNA5P52803 228 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 GTF2BQ00403 316 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 MAPK7Q13164 816 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 GRIK4Q16099 956 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 KCNA10Q16322 511 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 BMT2Q1RMZ1 405 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 MTHFD1LQ6UB35 978 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 EPM2AIP1Q7L775 607 aaPredicted RBP11.38□□□□□ -0.59
MDC1-205ENST00000425072 HAUS6Q7Z4H7 955 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 SMYD4Q8IYR2 804 aaPredicted RBP11.38□□□□□ -0.59
MDC1-205ENST00000425072 SYCP3Q8IZU3 236 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 DAW1Q8N136 415 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 NME8Q8N427 588 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 KIAA0895Q8NCT3 520 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 ANKRD20A12PQ8NF67 263 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 KAT2BQ92831 832 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 HPS3Q969F9 1004 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 VTI1AQ96AJ9 217 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 ACCSQ96QU6 501 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 XPNPEP1Q9NQW7 623 aa11.38□□□□□ -0.59
MDC1-205ENST00000425072 SUCLA2Q9P2R7 463 aaPredicted RBP11.38□□□□□ -0.59
MDC1-205ENST00000425072 CUL9Q8IWT3 2517 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 ZBTB42B2RXF5 422 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 K7ERI5 159 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 ASGR1P07306 291 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 SMIM10L2AP0DMW4 78 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 SMIM10L2BP0DMW5 78 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 PTGS1P23219 599 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 NMT1P30419 496 aaKnown RBP11.37□□□□□ -0.59
MDC1-205ENST00000425072 NAMPTP43490 491 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 CHMP4BP1P59074 171 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 IGBP1P78318 339 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 FKBP3Q00688 224 aaKnown RBP11.37□□□□□ -0.59
MDC1-205ENST00000425072 PTPN11Q06124 597 aaPredicted RBP11.37□□□□□ -0.59
MDC1-205ENST00000425072 SPAG1Q07617 926 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 HSP90AA2PQ14568 343 aaPredicted RBP11.37□□□□□ -0.59
MDC1-205ENST00000425072 LRRC41Q15345 812 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 LHX8Q68G74 356 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 ANKRD40Q6AI12 368 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 FBXO46Q6PJ61 603 aaPredicted RBP11.37□□□□□ -0.59
MDC1-205ENST00000425072 HS2ST1Q7LGA3 356 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 LUZP1Q86V48 1076 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 FAM114A1Q8IWE2 563 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 DHX40Q8IX18 779 aaKnown RBP11.37□□□□□ -0.59
MDC1-205ENST00000425072 AOPEPQ8N6M6 819 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 DEPTORQ8TB45 409 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 SCFD1Q8WVM8 642 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 PRPF31Q8WWY3 499 aaKnown RBP11.37□□□□□ -0.59
MDC1-205ENST00000425072 KCNN1Q92952 543 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 TMEM143Q96AN5 459 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 MAP7D2Q96T17 732 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 STRA6Q9BX79 667 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 POLR3FQ9H1D9 316 aaPredicted RBP11.37□□□□□ -0.59
MDC1-205ENST00000425072 C2orf40Q9H1Z8 148 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 TMEM134Q9H6X4 195 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 SETD4Q9NVD3 440 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 CTNND2Q9UQB3 1225 aa11.37□□□□□ -0.59
MDC1-205ENST00000425072 SMIM35A0A1B0GVV1 85 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 C17orf102A2RUQ5 167 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 K7ENM7 598 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 CETN3O15182 167 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 SLC16A4O15374 487 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 PRPF6O94906 941 aaKnown RBP11.36□□□□□ -0.59
MDC1-205ENST00000425072 C22orf31O95567 290 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 GNA14O95837 355 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
MDC1-205ENST00000425072 NCKAP1LP55160 1127 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 STX17P56962 302 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 LAMTOR4Q0VGL1 99 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 STRN3Q13033 797 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 MYBPC2Q14324 1141 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 EDRF1Q3B7T1 1238 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 CCSAPQ6IQ19 270 aaPredicted RBP11.36□□□□□ -0.59
MDC1-205ENST00000425072 NFRKBQ6P4R8 1299 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 ZBTB8OSQ8IWT0 167 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 CSGALNACT2Q8N6G5 542 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 LENG1Q96BZ8 264 aaPredicted RBP11.36□□□□□ -0.59
MDC1-205ENST00000425072 GLT1D1Q96MS3 346 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 CTAGE1Q96RT6 745 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 SRRTQ9BXP5 876 aaKnown RBP11.36□□□□□ -0.59
MDC1-205ENST00000425072 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.36□□□□□ -0.59
MDC1-205ENST00000425072 GBP3Q9H0R5 595 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 SEMA6BQ9H3T3 888 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 THAP9Q9H5L6 903 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 GPRC5CQ9NQ84 441 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 TYW1Q9NV66 732 aaKnown RBP11.36□□□□□ -0.59
MDC1-205ENST00000425072 FANCLQ9NW38 375 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 MAGEC2Q9UBF1 373 aaPredicted RBP11.36□□□□□ -0.59
MDC1-205ENST00000425072 TRAF3IP3Q9Y228 551 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 NFE2L3Q9Y4A8 694 aa11.36□□□□□ -0.59
MDC1-205ENST00000425072 DENND3A2RUS2 1198 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 MBLAC1A4D2B0 266 aaPredicted RBP11.35□□□□□ -0.59
MDC1-205ENST00000425072 LRRIQ4A6NIV6 560 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 KBTBD13C9JR72 458 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 TPM2P07951 284 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 SRGAP2CP0DJJ0 459 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 MYBP10242 640 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms