RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 GPR179Q6PRD1 2367 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 ZMYM6O95789 1325 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 FRMPD4Q14CM0 1322 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 S1PR4O95977 384 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 SP9P0CG40 484 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 KLRC1P26715 233 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 ANKRD45Q5TZF3 282 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 PCNX4Q63HM2 1172 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 NUDT18Q6ZVK8 323 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 CYB5R4Q7L1T6 521 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 TRMT1LQ7Z2T5 733 aaKnown RBP8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 TMEM87AQ8NBN3 555 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 GIMAP8Q8ND71 665 aaPredicted RBP8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 RILPL2Q969X0 211 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 ACSF2Q96CM8 615 aaPredicted RBP8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 SEMA4AQ9H3S1 761 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 RIOX1Q9H6W3 641 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 SENP2Q9HC62 589 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 DUSP12Q9UNI6 340 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 USTQ9Y2C2 406 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 PCDHB3Q9Y5E6 796 aa8.59□□□□□ -1.03
HLA-DQA1-204ENST00000422863 SALL3Q9BXA9 1300 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 PNMA6FA0A0J9YX94 578 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 SMIM35A0A1B0GVV1 85 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 MEIS2O14770 477 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 LRRN2O75325 713 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 ITGB5P18084 799 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 FAM189BP81408 668 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 CAMK2BQ13554 666 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 KIZQ2M2Z5 673 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 SWT1Q5T5J6 900 aaKnown RBP8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 XRRA1Q6P2D8 792 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 BLOC1S3Q6QNY0 202 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 FAM228AQ86W67 206 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 VPS52Q8N1B4 723 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 SLC39A11Q8N1S5 342 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 NME8Q8N427 588 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 SUMF1Q8NBK3 374 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 ZNF668Q96K58 619 aaPredicted RBP8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 OSMRQ99650 979 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 UBAC1Q9BSL1 405 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 TMEM117Q9H0C3 514 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 TBC1D17Q9HA65 648 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 C1orf112Q9NSG2 853 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 TMEM161AQ9NX61 479 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 PCDHB15Q9Y5E8 787 aa8.58□□□□□ -1.04
HLA-DQA1-204ENST00000422863 ASPMQ8IZT6 3477 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 KDM3AQ9Y4C1 1321 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 TDRD15B5MCY1 1934 aaKnown RBP8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 GPR182O15218 404 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 VTNP04004 478 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 SMCPP49901 116 aaPredicted RBP8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 STAT5BP51692 787 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 PDE1AP54750 535 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 DSC3Q14574 896 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 GRM4Q14833 912 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 SEC23AQ15436 765 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 LONRF3Q496Y0 759 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 CCDC149Q6ZUS6 474 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 OTOP3Q7RTS5 596 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 CABP7Q86V35 215 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 C1orf210Q8IVY1 113 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 KIAA0319LQ8IZA0 1049 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 ABI1Q8IZP0 508 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 HELQQ8TDG4 1101 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 SLC22A17Q8WUG5 538 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 CUL5Q93034 780 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 FOXQ1Q9C009 403 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 AZI2Q9H6S1 392 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 NCDNQ9UBB6 729 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 ATRXP46100 2492 aa8.57□□□□□ -1.04
HLA-DQA1-204ENST00000422863 DDX39AO00148 427 aaKnown RBP8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 N4BP1O75113 896 aaKnown RBP8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 RPLP2P05387 115 aaKnown RBP8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 SSBP05455 408 aaKnown RBP eCLIP8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 GLULP15104 373 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 FGFR4P22455 802 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 GBP2P32456 591 aaPredicted RBP8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 PPM1AP35813 382 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 BCAR1P56945 870 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 TBC1D8BQ0IIM8 1120 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 TRAF1Q13077 416 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 MTMR1Q13613 665 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 COL9A3Q14050 684 aaPredicted RBP8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 COL9A2Q14055 689 aaPredicted RBP8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 UBE2SQ16763 222 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 CLLU1OSQ5K130 101 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 PLA2G2CQ5R387 149 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 KIAA0319Q5VV43 1072 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 ZC3H14Q6PJT7 736 aaKnown RBP8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 CWC27Q6UX04 472 aaKnown RBP8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 GPR149Q86SP6 731 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 TMEM173Q86WV6 379 aaPredicted RBP8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 LRRC43Q8N309 656 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 SLC44A3Q8N4M1 653 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 GPR152Q8TDT2 470 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 GPRASP2Q96D09 838 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 PRR14Q9BWN1 585 aa8.56□□□□□ -1.04
HLA-DQA1-204ENST00000422863 KRT23Q9C075 422 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms