RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 ASAP2O43150 1006 aa29.38■■■□□ 2.29
CDK9-202ENST00000421939 GTPBP6O43824 516 aaPredicted RBP29.38■■■□□ 2.29
CDK9-202ENST00000421939 SYT1P21579 422 aa29.38■■■□□ 2.29
CDK9-202ENST00000421939 CMTR2Q8IYT2 770 aaKnown RBP29.38■■■□□ 2.29
CDK9-202ENST00000421939 FBXO22Q8NEZ5 403 aa29.38■■■□□ 2.29
CDK9-202ENST00000421939 PP2D1A8MPX8 630 aa29.37■■■□□ 2.29
CDK9-202ENST00000421939 LPXNO60711 386 aa29.37■■■□□ 2.29
CDK9-202ENST00000421939 SRGAP2CP0DJJ0 459 aa29.37■■■□□ 2.29
CDK9-202ENST00000421939 FAM189BP81408 668 aa29.37■■■□□ 2.29
CDK9-202ENST00000421939 MXD4Q14582 209 aaPredicted RBP29.37■■■□□ 2.29
CDK9-202ENST00000421939 EPC2Q52LR7 807 aa29.37■■■□□ 2.29
CDK9-202ENST00000421939 RNF149Q8NC42 400 aa29.37■■■□□ 2.29
CDK9-202ENST00000421939 TMEM161AQ9NX61 479 aa29.37■■■□□ 2.29
CDK9-202ENST00000421939 RALGAPA2Q2PPJ7 1873 aa29.37■■■□□ 2.29
CDK9-202ENST00000421939 NLRC5Q86WI3 1866 aa29.37■■■□□ 2.29
CDK9-202ENST00000421939 ARHGEF35A5YM69 484 aa29.36■■■□□ 2.29
CDK9-202ENST00000421939 POU3F3P20264 500 aaPredicted RBP29.36■■■□□ 2.29
CDK9-202ENST00000421939 ECM1Q16610 540 aa29.36■■■□□ 2.29
CDK9-202ENST00000421939 KRT79Q5XKE5 535 aa29.36■■■□□ 2.29
CDK9-202ENST00000421939 CATSPER4Q7RTX7 472 aa29.36■■■□□ 2.29
CDK9-202ENST00000421939 SRGAP1Q7Z6B7 1085 aa29.36■■■□□ 2.29
CDK9-202ENST00000421939 TMEM192Q8IY95 271 aa29.36■■■□□ 2.29
CDK9-202ENST00000421939 ELAC1Q9H777 363 aaKnown RBP29.36■■■□□ 2.29
CDK9-202ENST00000421939 DACT1Q9NYF0 836 aa29.36■■■□□ 2.29
CDK9-202ENST00000421939 MTCH2Q9Y6C9 303 aa29.36■■■□□ 2.29
CDK9-202ENST00000421939 BMP15O95972 392 aa29.35■■■□□ 2.29
CDK9-202ENST00000421939 LINC00271P0C7V0 271 aa29.35■■■□□ 2.29
CDK9-202ENST00000421939 ARL2P36404 184 aa29.35■■■□□ 2.29
CDK9-202ENST00000421939 PHKA2P46019 1235 aa29.35■■■□□ 2.29
CDK9-202ENST00000421939 GATMP50440 423 aa29.35■■■□□ 2.29
CDK9-202ENST00000421939 PAN2Q504Q3 1202 aaKnown RBP29.35■■■□□ 2.29
CDK9-202ENST00000421939 ARL6IP4Q66PJ3 421 aaKnown RBP29.35■■■□□ 2.29
CDK9-202ENST00000421939 MCPH1Q8NEM0 835 aa29.35■■■□□ 2.29
CDK9-202ENST00000421939 ASAP3Q8TDY4 903 aa29.35■■■□□ 2.29
CDK9-202ENST00000421939 POLR3FQ9H1D9 316 aaPredicted RBP29.35■■■□□ 2.29
CDK9-202ENST00000421939 CHST12Q9NRB3 414 aa29.35■■■□□ 2.29
CDK9-202ENST00000421939 PIN4Q9Y237 131 aaKnown RBP29.35■■■□□ 2.29
CDK9-202ENST00000421939 RWDD3Q9Y3V2 267 aa29.35■■■□□ 2.29
CDK9-202ENST00000421939 UNC80Q8N2C7 3258 aa29.34■■■□□ 2.29
CDK9-202ENST00000421939 CTNNB1P35222 781 aa29.34■■■□□ 2.29
CDK9-202ENST00000421939 TFDP1Q14186 410 aa29.34■■■□□ 2.29
CDK9-202ENST00000421939 MICALL1Q8N3F8 863 aa29.34■■■□□ 2.29
CDK9-202ENST00000421939 CLP1Q92989 425 aaKnown RBP29.34■■■□□ 2.29
CDK9-202ENST00000421939 MINDY3Q9H8M7 445 aa29.34■■■□□ 2.29
CDK9-202ENST00000421939 DDX19AQ9NUU7 478 aaKnown RBP29.34■■■□□ 2.29
CDK9-202ENST00000421939 KIAA1024Q9UPX6 916 aa29.34■■■□□ 2.29
CDK9-202ENST00000421939 MRPL42Q9Y6G3 142 aaKnown RBP29.34■■■□□ 2.29
CDK9-202ENST00000421939 PRRC2BQ5JSZ5 2229 aaKnown RBP29.34■■■□□ 2.29
CDK9-202ENST00000421939 VWA3AA6NCI4 1184 aa29.33■■■□□ 2.29
CDK9-202ENST00000421939 RESTQ13127 1097 aa29.33■■■□□ 2.29
CDK9-202ENST00000421939 CAPSQ13938 189 aa29.33■■■□□ 2.29
CDK9-202ENST00000421939 PADI6Q6TGC4 694 aa29.33■■■□□ 2.29
CDK9-202ENST00000421939 ECHDC2Q86YB7 292 aa29.33■■■□□ 2.29
CDK9-202ENST00000421939 PPM1EQ8WY54 764 aa29.33■■■□□ 2.29
CDK9-202ENST00000421939 AGPAT5Q9NUQ2 364 aa29.33■■■□□ 2.29
CDK9-202ENST00000421939 GLRA2P23416 452 aa29.32■■■□□ 2.28
CDK9-202ENST00000421939 CDC25AP30304 524 aa29.32■■■□□ 2.28
CDK9-202ENST00000421939 PTENP60484 403 aa29.32■■■□□ 2.28
CDK9-202ENST00000421939 FAM102BQ5T8I3 360 aa29.32■■■□□ 2.28
CDK9-202ENST00000421939 TWF2Q6IBS0 349 aaKnown RBP29.32■■■□□ 2.28
CDK9-202ENST00000421939 MAEAQ7L5Y9 396 aa29.32■■■□□ 2.28
CDK9-202ENST00000421939 MMTAG2Q9BU76 263 aaKnown RBP29.32■■■□□ 2.28
CDK9-202ENST00000421939 BHMT2Q9H2M3 363 aa29.32■■■□□ 2.28
CDK9-202ENST00000421939 GPRC5CQ9NQ84 441 aa29.32■■■□□ 2.28
CDK9-202ENST00000421939 MTMR6Q9Y217 621 aa29.32■■■□□ 2.28
CDK9-202ENST00000421939 REV3LO60673 3130 aa29.32■■■□□ 2.28
CDK9-202ENST00000421939 A0A0U1RQF3 1178 aa29.31■■■□□ 2.28
CDK9-202ENST00000421939 HOXA2O43364 376 aa29.31■■■□□ 2.28
CDK9-202ENST00000421939 FGFR1P11362 822 aa29.31■■■□□ 2.28
CDK9-202ENST00000421939 CCDC85BQ15834 202 aaPredicted RBP29.31■■■□□ 2.28
CDK9-202ENST00000421939 IFNLR1Q8IU57 520 aaPredicted RBP29.31■■■□□ 2.28
CDK9-202ENST00000421939 LMCD1Q9NZU5 365 aa29.31■■■□□ 2.28
CDK9-202ENST00000421939 FNDC1Q4ZHG4 1894 aaPredicted RBP29.31■■■□□ 2.28
CDK9-202ENST00000421939 TBKBP1A7MCY6 615 aa29.3■■■□□ 2.28
CDK9-202ENST00000421939 C5orf67F2Z3F1 127 aa29.3■■■□□ 2.28
CDK9-202ENST00000421939 H3BNC9 293 aa29.3■■■□□ 2.28
CDK9-202ENST00000421939 CYP11B2P19099 503 aa29.3■■■□□ 2.28
CDK9-202ENST00000421939 BMPR1AP36894 532 aa29.3■■■□□ 2.28
CDK9-202ENST00000421939 POU5F1BQ06416 359 aa29.3■■■□□ 2.28
CDK9-202ENST00000421939 RNF169Q8NCN4 708 aa29.3■■■□□ 2.28
CDK9-202ENST00000421939 SLC17A8Q8NDX2 589 aa29.3■■■□□ 2.28
CDK9-202ENST00000421939 TRAIPQ9BWF2 469 aa29.3■■■□□ 2.28
CDK9-202ENST00000421939 KIAA1671Q9BY89 1806 aa29.29■■■□□ 2.28
CDK9-202ENST00000421939 STX6O43752 255 aa29.29■■■□□ 2.28
CDK9-202ENST00000421939 RB1P06400 928 aa29.29■■■□□ 2.28
CDK9-202ENST00000421939 GPM6BQ13491 265 aa29.29■■■□□ 2.28
CDK9-202ENST00000421939 PCBP1Q15365 356 aaKnown RBP eCLIP29.29■■■□□ 2.28
CDK9-202ENST00000421939 SF3A1Q15459 793 aaKnown RBP29.29■■■□□ 2.28
CDK9-202ENST00000421939 ZNF598Q86UK7 904 aaKnown RBP29.29■■■□□ 2.28
CDK9-202ENST00000421939 C11orf84Q9BUA3 381 aaPredicted RBP29.29■■■□□ 2.28
CDK9-202ENST00000421939 NFKBIZQ9BYH8 718 aa29.29■■■□□ 2.28
CDK9-202ENST00000421939 TMEM117Q9H0C3 514 aa29.29■■■□□ 2.28
CDK9-202ENST00000421939 RNF19AQ9NV58 838 aa29.29■■■□□ 2.28
CDK9-202ENST00000421939 DNM3Q9UQ16 869 aa29.29■■■□□ 2.28
CDK9-202ENST00000421939 ERLIN2O94905 339 aa29.28■■■□□ 2.28
CDK9-202ENST00000421939 EOMESO95936 686 aa29.28■■■□□ 2.28
CDK9-202ENST00000421939 HSP90AA1P07900 732 aaKnown RBP29.28■■■□□ 2.28
CDK9-202ENST00000421939 ATF7P17544 494 aaPredicted RBP29.28■■■□□ 2.28
CDK9-202ENST00000421939 PLVAPQ9BX97 442 aa29.28■■■□□ 2.28
CDK9-202ENST00000421939 A0A0C4DFX4 3053 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 280.1 ms