RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 ZNF410Q86VK4 478 aa12.78□□□□□ -0.36
SYNC-203ENST00000417633 SFR1Q86XK3 245 aa12.78□□□□□ -0.36
SYNC-203ENST00000417633 IFNLR1Q8IU57 520 aaPredicted RBP12.78□□□□□ -0.36
SYNC-203ENST00000417633 RHPN2Q8IUC4 686 aa12.78□□□□□ -0.36
SYNC-203ENST00000417633 DNAJB3Q8WWF6 145 aa12.78□□□□□ -0.36
SYNC-203ENST00000417633 BSNDQ8WZ55 320 aa12.78□□□□□ -0.36
SYNC-203ENST00000417633 NFKBIZQ9BYH8 718 aa12.78□□□□□ -0.36
SYNC-203ENST00000417633 TRPV6Q9H1D0 765 aa12.78□□□□□ -0.36
SYNC-203ENST00000417633 ST6GALNAC4Q9H4F1 302 aa12.78□□□□□ -0.36
SYNC-203ENST00000417633 ZHX3Q9H4I2 956 aa12.78□□□□□ -0.36
SYNC-203ENST00000417633 EXOC1Q9NV70 894 aa12.78□□□□□ -0.36
SYNC-203ENST00000417633 AKT3Q9Y243 479 aa12.78□□□□□ -0.36
SYNC-203ENST00000417633 DCDC2CA8MYV0 355 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 TLR3O15455 904 aaKnown RBP12.77□□□□□ -0.37
SYNC-203ENST00000417633 VTNP04004 478 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 GPC3P51654 580 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 SMTNP53814 917 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 NCKAP1LP55160 1127 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 PEX3P56589 373 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 RBL2Q08999 1139 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 CAPSQ13938 189 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 TFDP1Q14186 410 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 TRIM71Q2Q1W2 868 aaKnown RBP12.77□□□□□ -0.37
SYNC-203ENST00000417633 COBLL1Q53SF7 1204 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 RSPH3Q86UC2 560 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 DHX38Q92620 1227 aaKnown RBP12.77□□□□□ -0.37
SYNC-203ENST00000417633 STRA6Q9BX79 667 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 FAM49AQ9H0Q0 323 aaPredicted RBP12.77□□□□□ -0.37
SYNC-203ENST00000417633 ADAMTS10Q9H324 1103 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 ARHGAP28Q9P2N2 729 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 NOD1Q9Y239 953 aa12.77□□□□□ -0.37
SYNC-203ENST00000417633 H0YCG3 227 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 SRGAP2CP0DJJ0 459 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 BMP6P22004 513 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 ABCD1P33897 745 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 NLRP11P59045 1033 aaKnown RBP12.76□□□□□ -0.37
SYNC-203ENST00000417633 PTENP60484 403 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 GTF2BQ00403 316 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 TLE2Q04725 743 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 STK4Q13043 487 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 ALCAMQ13740 583 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 LRRC26Q2I0M4 334 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 ZSCAN23Q3MJ62 389 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 FAM26DQ5JW98 314 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 ZNF658Q5TYW1 1059 aaPredicted RBP12.76□□□□□ -0.37
SYNC-203ENST00000417633 CDCA2Q69YH5 1023 aaPredicted RBP12.76□□□□□ -0.37
SYNC-203ENST00000417633 EPM2AIP1Q7L775 607 aaPredicted RBP12.76□□□□□ -0.37
SYNC-203ENST00000417633 KSR1Q8IVT5 923 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 FAM178BQ8IXR5 827 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 RNF149Q8NC42 400 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 TMEM161BQ8NDZ6 487 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 CAGE1Q8TC20 777 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 WNT8BQ93098 351 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 C2orf40Q9H1Z8 148 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 TMEM134Q9H6X4 195 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 MRPL44Q9H9J2 332 aaKnown RBP12.76□□□□□ -0.37
SYNC-203ENST00000417633 IFT122Q9HBG6 1241 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 KMT5AQ9NQR1 393 aa12.76□□□□□ -0.37
SYNC-203ENST00000417633 LRRIQ4A6NIV6 560 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 CCDC169A6NNP5 214 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 SLC16A4O15374 487 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 PQBP1O60828 265 aaKnown RBP12.75□□□□□ -0.37
SYNC-203ENST00000417633 PPP1R37O75864 691 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 NMT1P30419 496 aaKnown RBP12.75□□□□□ -0.37
SYNC-203ENST00000417633 EFNA5P52803 228 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 CRYBB1P53674 252 aaPredicted RBP12.75□□□□□ -0.37
SYNC-203ENST00000417633 NLRP12P59046 1061 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 MRPS6P82932 125 aaKnown RBP12.75□□□□□ -0.37
SYNC-203ENST00000417633 MGAT3Q09327 533 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 FAAP100Q0VG06 881 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 BFSP2Q13515 415 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 TRIM60Q495X7 471 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 SASS6Q6UVJ0 657 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 PHLPP2Q6ZVD8 1323 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 HAUS6Q7Z4H7 955 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 SRGAP1Q7Z6B7 1085 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 ADGRA3Q8IWK6 1321 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 KIAA0895Q8NCT3 520 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 DEPTORQ8TB45 409 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 ZNF507Q8TCN5 953 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 HPS3Q969F9 1004 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 HVCN1Q96D96 273 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 FGFBP2Q9BYJ0 223 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 CELF4Q9BZC1 486 aaKnown RBP12.75□□□□□ -0.37
SYNC-203ENST00000417633 SLC39A2Q9NP94 309 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 TBC1D7Q9P0N9 293 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 PCDHB13Q9Y5F0 798 aa12.75□□□□□ -0.37
SYNC-203ENST00000417633 A0A087WZ62 844 aa12.74□□□□□ -0.37
SYNC-203ENST00000417633 SYCE3A1L190 88 aa12.74□□□□□ -0.37
SYNC-203ENST00000417633 K7ENM7 598 aa12.74□□□□□ -0.37
SYNC-203ENST00000417633 M0QZ92 97 aa12.74□□□□□ -0.37
SYNC-203ENST00000417633 BIN1O00499 593 aa12.74□□□□□ -0.37
SYNC-203ENST00000417633 PITPNM1O00562 1244 aa12.74□□□□□ -0.37
SYNC-203ENST00000417633 EIF3DO15371 548 aaKnown RBP eCLIP12.74□□□□□ -0.37
SYNC-203ENST00000417633 GCNT3O95395 438 aa12.74□□□□□ -0.37
SYNC-203ENST00000417633 CHRNA1P02708 482 aa12.74□□□□□ -0.37
SYNC-203ENST00000417633 CKBP12277 381 aa12.74□□□□□ -0.37
SYNC-203ENST00000417633 THPOP40225 353 aa12.74□□□□□ -0.37
SYNC-203ENST00000417633 PPP1R2P41236 205 aa12.74□□□□□ -0.37
SYNC-203ENST00000417633 PHKA2P46019 1235 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms