RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 CAND2O75155 1236 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 ERLIN2O94905 339 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 KIF20AO95235 890 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 RPN1P04843 607 aaKnown RBP9.35□□□□□ -0.91
TRIM48-201ENST00000417545 PLS3P13797 630 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 RAG1P15918 1043 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 CASP1P29466 404 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 NAMPTP43490 491 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 MNX1P50219 401 aaPredicted RBP9.35□□□□□ -0.91
TRIM48-201ENST00000417545 CDK7P50613 346 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 NLRP11P59045 1033 aaKnown RBP9.35□□□□□ -0.91
TRIM48-201ENST00000417545 MRPS6P82932 125 aaKnown RBP9.35□□□□□ -0.91
TRIM48-201ENST00000417545 LAMTOR4Q0VGL1 99 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 STRN3Q13033 797 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 GIT2Q14161 759 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 KLHL40Q2TBA0 621 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 MARCH8Q5T0T0 291 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 C1orf53Q5VUE5 145 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 CNNM4Q6P4Q7 775 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 UNC13DQ70J99 1090 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 C7orf61Q8IZ16 206 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 SLC17A8Q8NDX2 589 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 BICD1Q96G01 975 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 ZNF668Q96K58 619 aaPredicted RBP9.35□□□□□ -0.91
TRIM48-201ENST00000417545 GCOM2Q9BZD3 368 aaPredicted RBP9.35□□□□□ -0.91
TRIM48-201ENST00000417545 INO80BQ9C086 356 aaPredicted RBP9.35□□□□□ -0.91
TRIM48-201ENST00000417545 HIPK3Q9H422 1215 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 MRPL44Q9H9J2 332 aaKnown RBP9.35□□□□□ -0.91
TRIM48-201ENST00000417545 C17orf75Q9HAS0 396 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 POLD4Q9HCU8 107 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 XPNPEP1Q9NQW7 623 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 TBC1D7Q9P0N9 293 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 SEL1LQ9UBV2 794 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 CDY2AQ9Y6F7 541 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 PHLPP2Q6ZVD8 1323 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 PVALEFA0A1B0GWK0 134 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 RSPH10B2B2RC85 870 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 INO80B-WBP1J3KQ70 363 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 TRAK2O60296 914 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 GCNT3O95395 438 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 RSPH10BP0C881 870 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 HOXC8P31273 242 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 ABCD1P33897 745 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 NCBP1Q09161 790 aaKnown RBP9.34□□□□□ -0.91
TRIM48-201ENST00000417545 COASYQ13057 564 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 STIM1Q13586 685 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 CAPSQ13938 189 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 SNX17Q15036 470 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 KIZQ2M2Z5 673 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 ARSHQ5FYA8 562 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 FAM26FQ5R3K3 315 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 SASS6Q6UVJ0 657 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 ANKRD33Q7Z3H0 272 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 ZNF410Q86VK4 478 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 SFR1Q86XK3 245 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 RNF149Q8NC42 400 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 LRRC15Q8TF66 581 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 TOX2Q96NM4 488 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 OSMRQ99650 979 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 GTPBP4Q9BZE4 634 aaKnown RBP9.34□□□□□ -0.91
TRIM48-201ENST00000417545 TANC1Q9C0D5 1861 aa9.34□□□□□ -0.91
TRIM48-201ENST00000417545 A0A087WZ62 844 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 IGKV6-21A0A0C4DH24 114 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 SLC16A4O15374 487 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 LETM1O95202 739 aaPredicted RBP9.33□□□□□ -0.92
TRIM48-201ENST00000417545 SELPP16109 830 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 SFPQP23246 707 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRIM48-201ENST00000417545 GLRA2P23416 452 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 MATR3P43243 847 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRIM48-201ENST00000417545 GPC3P51654 580 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 ADAM17P78536 824 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 DPYDQ12882 1025 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 PSMD2Q13200 908 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 DRP2Q13474 957 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 ALCAMQ13740 583 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 HIC1Q14526 733 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 KMT5BQ4FZB7 885 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 LRRC8DQ7L1W4 858 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 CATSPER4Q7RTX7 472 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 SH3RF1Q7Z6J0 888 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 KSR1Q8IVT5 923 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 ELOA2Q8IYF1 753 aaPredicted RBP9.33□□□□□ -0.92
TRIM48-201ENST00000417545 KIAA0319LQ8IZA0 1049 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 SYCP3Q8IZU3 236 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 ASAP3Q8TDY4 903 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 ERCC4Q92889 916 aaPredicted RBP9.33□□□□□ -0.92
TRIM48-201ENST00000417545 GSDMAQ96QA5 445 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 CEP89Q96ST8 783 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 FDXACB1Q9BRP7 624 aaPredicted RBP9.33□□□□□ -0.92
TRIM48-201ENST00000417545 CELF4Q9BZC1 486 aaKnown RBP9.33□□□□□ -0.92
TRIM48-201ENST00000417545 PCDH10Q9P2E7 1040 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 EXOC7Q9UPT5 735 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 NR2E3Q9Y5X4 410 aa9.33□□□□□ -0.92
TRIM48-201ENST00000417545 K7ERI5 159 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 BIN1O00499 593 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 RPS6KA5O75582 802 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 PARNO95453 639 aaKnown RBP9.32□□□□□ -0.92
TRIM48-201ENST00000417545 CD4P01730 458 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 CKBP12277 381 aa9.32□□□□□ -0.92
TRIM48-201ENST00000417545 SCP2P22307 547 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms