RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ESYT2A0FGR8 921 aa11.32□□□□□ -0.6
MDC1-202ENST00000416571 PROB1E7EW31 1015 aa11.32□□□□□ -0.6
MDC1-202ENST00000416571 ZC3H11AO75152 810 aaKnown RBP eCLIP11.32□□□□□ -0.6
MDC1-202ENST00000416571 OATP04181 439 aa11.32□□□□□ -0.6
MDC1-202ENST00000416571 ASGR2P07307 311 aa11.32□□□□□ -0.6
MDC1-202ENST00000416571 WEE2P0C1S8 567 aa11.32□□□□□ -0.6
MDC1-202ENST00000416571 DARSP14868 501 aaKnown RBP11.32□□□□□ -0.6
MDC1-202ENST00000416571 GNA11P29992 359 aa11.32□□□□□ -0.6
MDC1-202ENST00000416571 GPC3P51654 580 aa11.32□□□□□ -0.6
MDC1-202ENST00000416571 PFKFB3Q16875 520 aaPredicted RBP11.32□□□□□ -0.6
MDC1-202ENST00000416571 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
MDC1-202ENST00000416571 KIAA1841Q6NSI8 718 aa11.32□□□□□ -0.6
MDC1-202ENST00000416571 DHX32Q7L7V1 743 aaKnown RBP11.32□□□□□ -0.6
MDC1-202ENST00000416571 TMEM105Q8N8V8 129 aa11.32□□□□□ -0.6
MDC1-202ENST00000416571 CRYGNQ8WXF5 182 aa11.32□□□□□ -0.6
MDC1-202ENST00000416571 RSPH1Q8WYR4 309 aa11.32□□□□□ -0.6
MDC1-202ENST00000416571 DISC1Q9NRI5 854 aa11.32□□□□□ -0.6
MDC1-202ENST00000416571 PRR23AA6NEV1 266 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 CHMP2AO43633 222 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 SKIP12755 728 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 FGFR4P22455 802 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 SFPQP23246 707 aaKnown RBP eCLIP11.31□□□□□ -0.6
MDC1-202ENST00000416571 NBL1P41271 181 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 JAK3P52333 1124 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 RCAN1P53805 252 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 CDC42EP1Q00587 391 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 EXOSC10Q01780 885 aaKnown RBP11.31□□□□□ -0.6
MDC1-202ENST00000416571 AKAP17AQ02040 695 aaKnown RBP11.31□□□□□ -0.6
MDC1-202ENST00000416571 PRKCEQ02156 737 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 RNASELQ05823 741 aaKnown RBP11.31□□□□□ -0.6
MDC1-202ENST00000416571 KRT32Q14532 448 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 TWF2Q6IBS0 349 aaKnown RBP11.31□□□□□ -0.6
MDC1-202ENST00000416571 GLB1LQ6UWU2 654 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 ASCL5Q7RTU5 278 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 CABP7Q86V35 215 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 ZDHHC14Q8IZN3 488 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 LINC01465Q8N7H1 131 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 C12orf76Q8N812 135 aaPredicted RBP11.31□□□□□ -0.6
MDC1-202ENST00000416571 BICD2Q8TD16 824 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 ACSF2Q96CM8 615 aaPredicted RBP11.31□□□□□ -0.6
MDC1-202ENST00000416571 GCOM2Q9BZD3 368 aaPredicted RBP11.31□□□□□ -0.6
MDC1-202ENST00000416571 ZMYND12Q9H0C1 365 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 ZBP1Q9H171 429 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 CYP26B1Q9NR63 512 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 CHST12Q9NRB3 414 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 LIMD1Q9UGP4 676 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 USTQ9Y2C2 406 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 CFAP47Q6ZTR5 3102 aa11.31□□□□□ -0.6
MDC1-202ENST00000416571 PTPRZ1P23471 2315 aaPredicted RBP11.3□□□□□ -0.6
MDC1-202ENST00000416571 GAS7O60861 476 aa11.3□□□□□ -0.6
MDC1-202ENST00000416571 EPCAMP16422 314 aa11.3□□□□□ -0.6
MDC1-202ENST00000416571 CDC27P30260 824 aa11.3□□□□□ -0.6
MDC1-202ENST00000416571 SFNP31947 248 aa11.3□□□□□ -0.6
MDC1-202ENST00000416571 DNM2P50570 870 aa11.3□□□□□ -0.6
MDC1-202ENST00000416571 POLGP54098 1239 aaPredicted RBP11.3□□□□□ -0.6
MDC1-202ENST00000416571 CCDC149Q6ZUS6 474 aa11.3□□□□□ -0.6
MDC1-202ENST00000416571 OTOP3Q7RTS5 596 aa11.3□□□□□ -0.6
MDC1-202ENST00000416571 ZNF598Q86UK7 904 aaKnown RBP11.3□□□□□ -0.6
MDC1-202ENST00000416571 PPFIBP1Q86W92 1011 aa11.3□□□□□ -0.6
MDC1-202ENST00000416571 FLCNQ8NFG4 579 aa11.3□□□□□ -0.6
MDC1-202ENST00000416571 AUTS2Q8WXX7 1259 aa11.3□□□□□ -0.6
MDC1-202ENST00000416571 NKD2Q969F2 451 aaPredicted RBP11.3□□□□□ -0.6
MDC1-202ENST00000416571 TEKT3Q9BXF9 490 aa11.3□□□□□ -0.6
MDC1-202ENST00000416571 INO80BQ9C086 356 aaPredicted RBP11.3□□□□□ -0.6
MDC1-202ENST00000416571 SMOC2Q9H3U7 446 aa11.3□□□□□ -0.6
MDC1-202ENST00000416571 SEPT9Q9UHD8 586 aaPredicted RBP11.3□□□□□ -0.6
MDC1-202ENST00000416571 INPP5FQ9Y2H2 1132 aa11.3□□□□□ -0.6
MDC1-202ENST00000416571 DENND4AQ7Z401 1863 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 ZNF862O60290 1169 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 CSDE1O75534 798 aaKnown RBP11.29□□□□□ -0.6
MDC1-202ENST00000416571 HMGB1P09429 215 aaKnown RBP11.29□□□□□ -0.6
MDC1-202ENST00000416571 CTSAP10619 480 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 CIITAP33076 1130 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 ADD1P35611 737 aaKnown RBP11.29□□□□□ -0.6
MDC1-202ENST00000416571 PHKA2P46019 1235 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 RAB27AP51159 221 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 CLCN5P51795 746 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 LONRF3Q496Y0 759 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 MTERF2Q49AM1 385 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 LRCH2Q5VUJ6 765 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 TMC5Q6UXY8 1006 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 DDX53Q86TM3 631 aaKnown RBP11.29□□□□□ -0.6
MDC1-202ENST00000416571 CCDC148Q8NFR7 591 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 LPPQ93052 612 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 IGSF21Q96ID5 467 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 CCDC136Q96JN2 1154 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 RIT2Q99578 217 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 EMILIN2Q9BXX0 1053 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 GBP3Q9H0R5 595 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 SFXN1Q9H9B4 322 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 FAM217BQ9NTX9 383 aaPredicted RBP11.29□□□□□ -0.6
MDC1-202ENST00000416571 STK39Q9UEW8 545 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 FBXL21Q9UKT6 434 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 PIN4Q9Y237 131 aaKnown RBP11.29□□□□□ -0.6
MDC1-202ENST00000416571 IRAK3Q9Y616 596 aa11.29□□□□□ -0.6
MDC1-202ENST00000416571 CHD6Q8TD26 2715 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 A0A087WZ62 844 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 MSH4O15457 936 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 RFX1P22670 979 aa11.28□□□□□ -0.6
MDC1-202ENST00000416571 KLRC2P26717 231 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms