RNA–Protein interactions for RNA: ENST00000415948.5

CRAT-203, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-203ENST00000415948 MRPS27Q92552 414 aaKnown RBP17.12■□□□□ 0.33
CRAT-203ENST00000415948 FIZ1Q96SL8 496 aa17.12■□□□□ 0.33
CRAT-203ENST00000415948 FGFBP2Q9BYJ0 223 aa17.12■□□□□ 0.33
CRAT-203ENST00000415948 ERVK-5Q9HDB9 667 aa17.12■□□□□ 0.33
CRAT-203ENST00000415948 CCDC39Q9UFE4 941 aa17.12■□□□□ 0.33
CRAT-203ENST00000415948 USP20Q9Y2K6 914 aa17.12■□□□□ 0.33
CRAT-203ENST00000415948 LAMA2P24043 3122 aaKnown RBP17.12■□□□□ 0.33
CRAT-203ENST00000415948 SRGAP2CP0DJJ0 459 aa17.11■□□□□ 0.33
CRAT-203ENST00000415948 DARSP14868 501 aaKnown RBP17.11■□□□□ 0.33
CRAT-203ENST00000415948 GUCY2CP25092 1073 aa17.11■□□□□ 0.33
CRAT-203ENST00000415948 TXLNAP40222 546 aa17.11■□□□□ 0.33
CRAT-203ENST00000415948 CRYBB1P53674 252 aaPredicted RBP17.11■□□□□ 0.33
CRAT-203ENST00000415948 SNW1Q13573 536 aaKnown RBP17.11■□□□□ 0.33
CRAT-203ENST00000415948 SHHQ15465 462 aa17.11■□□□□ 0.33
CRAT-203ENST00000415948 CCDC73Q6ZRK6 1079 aa17.11■□□□□ 0.33
CRAT-203ENST00000415948 DYMQ7RTS9 669 aa17.11■□□□□ 0.33
CRAT-203ENST00000415948 TAS1R3Q7RTX0 852 aa17.11■□□□□ 0.33
CRAT-203ENST00000415948 TMCO2Q7Z6W1 182 aaPredicted RBP17.11■□□□□ 0.33
CRAT-203ENST00000415948 NME8Q8N427 588 aa17.11■□□□□ 0.33
CRAT-203ENST00000415948 TMEM199Q8N511 208 aa17.11■□□□□ 0.33
CRAT-203ENST00000415948 RNF149Q8NC42 400 aa17.11■□□□□ 0.33
CRAT-203ENST00000415948 KBTBD4Q9NVX7 518 aa17.11■□□□□ 0.33
CRAT-203ENST00000415948 GAS2O43903 313 aaKnown RBP17.1■□□□□ 0.33
CRAT-203ENST00000415948 TMOD1P28289 359 aa17.1■□□□□ 0.33
CRAT-203ENST00000415948 MBTD1Q05BQ5 628 aa17.1■□□□□ 0.33
CRAT-203ENST00000415948 PPIGQ13427 754 aaKnown RBP eCLIP17.1■□□□□ 0.33
CRAT-203ENST00000415948 AMHR2Q16671 573 aa17.1■□□□□ 0.33
CRAT-203ENST00000415948 RASIP1Q5U651 963 aa17.1■□□□□ 0.33
CRAT-203ENST00000415948 FAM109BQ6ICB4 259 aaPredicted RBP17.1■□□□□ 0.33
CRAT-203ENST00000415948 TSHZ1Q6ZSZ6 1077 aa17.1■□□□□ 0.33
CRAT-203ENST00000415948 RSPH3Q86UC2 560 aa17.1■□□□□ 0.33
CRAT-203ENST00000415948 RTN4RL1Q86UN2 441 aaPredicted RBP17.1■□□□□ 0.33
CRAT-203ENST00000415948 FMR1NBQ8N0W7 255 aaPredicted RBP17.1■□□□□ 0.33
CRAT-203ENST00000415948 MCPH1Q8NEM0 835 aa17.1■□□□□ 0.33
CRAT-203ENST00000415948 NLRP7Q8WX94 980 aa17.1■□□□□ 0.33
CRAT-203ENST00000415948 PADI3Q9ULW8 664 aa17.1■□□□□ 0.33
CRAT-203ENST00000415948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.09■□□□□ 0.33
CRAT-203ENST00000415948 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.09■□□□□ 0.33
CRAT-203ENST00000415948 RFC2P35250 354 aa17.09■□□□□ 0.33
CRAT-203ENST00000415948 ZNF131P52739 623 aa17.09■□□□□ 0.33
CRAT-203ENST00000415948 PTENP60484 403 aa17.09■□□□□ 0.33
CRAT-203ENST00000415948 DEFB103AP81534 67 aa17.09■□□□□ 0.33
CRAT-203ENST00000415948 CDCA2Q69YH5 1023 aaPredicted RBP17.09■□□□□ 0.33
CRAT-203ENST00000415948 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.09■□□□□ 0.33
CRAT-203ENST00000415948 OTOP2Q7RTS6 562 aa17.09■□□□□ 0.33
CRAT-203ENST00000415948 KCTD17Q8N5Z5 321 aa17.09■□□□□ 0.33
CRAT-203ENST00000415948 GLIS3Q8NEA6 775 aa17.09■□□□□ 0.33
CRAT-203ENST00000415948 TCP11Q8WWU5 503 aa17.09■□□□□ 0.33
CRAT-203ENST00000415948 DDX12PQ92771 950 aa17.09■□□□□ 0.33
CRAT-203ENST00000415948 HPS3Q969F9 1004 aa17.09■□□□□ 0.33
CRAT-203ENST00000415948 LBHD1Q9BQE6 289 aaPredicted RBP17.09■□□□□ 0.33
CRAT-203ENST00000415948 JPH2Q9BR39 696 aaPredicted RBP17.09■□□□□ 0.33
CRAT-203ENST00000415948 CCDC113Q9H0I3 377 aa17.09■□□□□ 0.33
CRAT-203ENST00000415948 BLZF1Q9H2G9 400 aa17.09■□□□□ 0.33
CRAT-203ENST00000415948 FAM13BQ9NYF5 915 aa17.09■□□□□ 0.33
CRAT-203ENST00000415948 B4GALT5O43286 388 aa17.08■□□□□ 0.32
CRAT-203ENST00000415948 NR1I2O75469 434 aa17.08■□□□□ 0.32
CRAT-203ENST00000415948 EIF4BP23588 611 aaKnown RBP17.08■□□□□ 0.32
CRAT-203ENST00000415948 NPTX2P47972 431 aa17.08■□□□□ 0.32
CRAT-203ENST00000415948 DNM2P50570 870 aa17.08■□□□□ 0.32
CRAT-203ENST00000415948 PEX3P56589 373 aa17.08■□□□□ 0.32
CRAT-203ENST00000415948 CUL4BQ13620 913 aa17.08■□□□□ 0.32
CRAT-203ENST00000415948 DSC3Q14574 896 aa17.08■□□□□ 0.32
CRAT-203ENST00000415948 ZNF410Q86VK4 478 aa17.08■□□□□ 0.32
CRAT-203ENST00000415948 IFNLR1Q8IU57 520 aaPredicted RBP17.08■□□□□ 0.32
CRAT-203ENST00000415948 IFIH1Q9BYX4 1025 aaKnown RBP17.08■□□□□ 0.32
CRAT-203ENST00000415948 TRIM9Q9C026 710 aa17.08■□□□□ 0.32
CRAT-203ENST00000415948 UBE2OQ9C0C9 1292 aaKnown RBP17.08■□□□□ 0.32
CRAT-203ENST00000415948 IKZF4Q9H2S9 585 aa17.08■□□□□ 0.32
CRAT-203ENST00000415948 LMBRD1Q9NUN5 540 aa17.08■□□□□ 0.32
CRAT-203ENST00000415948 ST3GAL5Q9UNP4 418 aa17.08■□□□□ 0.32
CRAT-203ENST00000415948 COLQQ9Y215 455 aaPredicted RBP17.08■□□□□ 0.32
CRAT-203ENST00000415948 FRMD3A2A2Y4 597 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 LRRIQ4A6NIV6 560 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 RPS6KA5O75582 802 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 SYKP43405 635 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 AFMP43652 599 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 PRPF38BQ5VTL8 546 aaKnown RBP17.07■□□□□ 0.32
CRAT-203ENST00000415948 CNKSR3Q6P9H4 555 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 SV2BQ7L1I2 683 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 SFR1Q86XK3 245 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 IQUBQ8NA54 791 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 PAGE5Q96GU1 130 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 TNMDQ9H2S6 317 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 ARHGAP28Q9P2N2 729 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 TTC3P53804 2025 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 KIAA1671Q9BY89 1806 aa17.07■□□□□ 0.32
CRAT-203ENST00000415948 TRIOBPQ9H2D6 2365 aa17.06■□□□□ 0.32
CRAT-203ENST00000415948 M0QZ92 97 aa17.06■□□□□ 0.32
CRAT-203ENST00000415948 SLC16A4O15374 487 aa17.06■□□□□ 0.32
CRAT-203ENST00000415948 KLRC4O43908 158 aa17.06■□□□□ 0.32
CRAT-203ENST00000415948 TSPAN1O60635 241 aa17.06■□□□□ 0.32
CRAT-203ENST00000415948 PRPF40AO75400 957 aaKnown RBP17.06■□□□□ 0.32
CRAT-203ENST00000415948 ZNF202O95125 648 aa17.06■□□□□ 0.32
CRAT-203ENST00000415948 SLFN14P0C7P3 912 aa17.06■□□□□ 0.32
CRAT-203ENST00000415948 HOXA11P31270 313 aaPredicted RBP17.06■□□□□ 0.32
CRAT-203ENST00000415948 BMP8BP34820 402 aa17.06■□□□□ 0.32
CRAT-203ENST00000415948 CASP5P51878 434 aa17.06■□□□□ 0.32
CRAT-203ENST00000415948 WDR5P61964 334 aaKnown RBP17.06■□□□□ 0.32
CRAT-203ENST00000415948 PAK2Q13177 524 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms