RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 KCTD2Q14681 263 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 USH1GQ495M9 461 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 MTERF2Q49AM1 385 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 MUM1L1Q5H9M0 696 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 WIPI1Q5MNZ9 446 aaPredicted RBP5.66□□□□□ -1.5
VPS41-205ENST00000414632 PRAMEF19Q5SWL8 479 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 ANO1Q5XXA6 986 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 ZNF787Q6DD87 383 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 FAM117BQ6P1L5 589 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 NFXL1Q6ZNB6 911 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 HDXQ7Z353 690 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 FAM160B2Q86V87 743 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 DGKHQ86XP1 1220 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 CCDC144CPQ8IYA2 1237 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 ANKRD35Q8N283 1001 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 SHCBP1Q8NEM2 672 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 TRPV1Q8NER1 839 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 NUP133Q8WUM0 1156 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 PIBF1Q8WXW3 757 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 WNT8BQ93098 351 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 SHISA4Q96DD7 197 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 PLPPR2Q96GM1 343 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 DEFB118Q96PH6 123 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 TM9SF2Q99805 663 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 CORO1BQ9BR76 489 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.66□□□□□ -1.5
VPS41-205ENST00000414632 CCDC86Q9H6F5 360 aaKnown RBP5.66□□□□□ -1.5
VPS41-205ENST00000414632 KRT82Q9NSB4 513 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 RNF146Q9NTX7 359 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 CCPG1Q9ULG6 757 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 SYNPO2Q9UMS6 1093 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 CORINQ9Y5Q5 1042 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 KIAA1217Q5T5P2 1943 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 hCG_2014768A0A024R1R8 64 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 NFIBO00712 420 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 SH2B2O14492 632 aaPredicted RBP5.65□□□□□ -1.5
VPS41-205ENST00000414632 FSCN2O14926 492 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 CNGA1P29973 690 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 MCM5P33992 734 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 IGBP1P78318 339 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 CNTN2Q02246 1040 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 GRM4Q14833 912 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 SART3Q15020 963 aaKnown RBP5.65□□□□□ -1.5
VPS41-205ENST00000414632 CDC37Q16543 378 aaPredicted RBP5.65□□□□□ -1.5
VPS41-205ENST00000414632 SLC35G1Q2M3R5 365 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 CCDC178Q5BJE1 867 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 LRFN4Q6PJG9 635 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 C6orf15Q6UXA7 325 aaPredicted RBP5.65□□□□□ -1.5
VPS41-205ENST00000414632 BTNL9Q6UXG8 535 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 NSMFQ6X4W1 530 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 C20orf204Q6ZNR8 217 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 FILIP1Q7Z7B0 1213 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 HOMER1Q86YM7 354 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 FAM178BQ8IXR5 827 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 ADGRF4Q8IZF3 695 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 GPR161Q8N6U8 529 aaKnown RBP5.65□□□□□ -1.5
VPS41-205ENST00000414632 ZSCAN1Q8NBB4 408 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 IGDCC4Q8TDY8 1250 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 U2AF1L4Q8WU68 220 aaKnown RBP5.65□□□□□ -1.5
VPS41-205ENST00000414632 TMEM40Q8WWA1 233 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 ANKS1AQ92625 1134 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 LENG1Q96BZ8 264 aaPredicted RBP5.65□□□□□ -1.5
VPS41-205ENST00000414632 DDX11Q96FC9 970 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 MAML3Q96JK9 1138 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 JAKMIP1Q96N16 626 aaKnown RBP5.65□□□□□ -1.5
VPS41-205ENST00000414632 NEK1Q96PY6 1258 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 NRSN2Q9GZP1 204 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 SLKQ9H2G2 1235 aaPredicted RBP5.65□□□□□ -1.5
VPS41-205ENST00000414632 RANBP17Q9H2T7 1088 aaKnown RBP5.65□□□□□ -1.5
VPS41-205ENST00000414632 ACAD9Q9H845 621 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 JMJD4Q9H9V9 463 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 LY9Q9HBG7 655 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 JPH1Q9HDC5 661 aaPredicted RBP5.65□□□□□ -1.5
VPS41-205ENST00000414632 MAD2L2Q9UI95 211 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 NAP1L2Q9ULW6 460 aaPredicted RBP5.65□□□□□ -1.5
VPS41-205ENST00000414632 SNX14Q9Y5W7 946 aa5.65□□□□□ -1.5
VPS41-205ENST00000414632 MYH7BA7E2Y1 1941 aa5.65□□□□□ -1.51
VPS41-205ENST00000414632 hCG_1642624A0A1W2PR95 340 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 PTPDC1A2A3K4 754 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 CCDC69A6NI79 296 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 MEIS3P2A8K0S8 358 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 B2RBV5 119 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 KLRF2D3W0D1 207 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 PPP1R12AO14974 1030 aaPredicted RBP5.64□□□□□ -1.51
VPS41-205ENST00000414632 ATP2A1O14983 1001 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 STRNO43815 780 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 PLA2G6O60733 806 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 DNAJC6O75061 913 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 PLEKHA8P1O95397 391 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 TFRCP02786 760 aaKnown RBP5.64□□□□□ -1.51
VPS41-205ENST00000414632 ICAM1P05362 532 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 HOXC6P09630 235 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 PLCG1P19174 1290 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 GUCY2CP25092 1073 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 CALML3P27482 149 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 HSPA4P34932 840 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 AFF1P51825 1210 aaKnown RBP5.64□□□□□ -1.51
VPS41-205ENST00000414632 OAZ1P54368 228 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 SQSTM1Q13501 440 aa5.64□□□□□ -1.51
VPS41-205ENST00000414632 QRICH1Q2TAL8 776 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms