RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 KCNC3Q14003 757 aa21.59■■□□□ 1.05
CPSF7-204ENST00000413232 PLPP4Q5VZY2 271 aa21.59■■□□□ 1.05
CPSF7-204ENST00000413232 FAM177A1Q8N128 213 aaPredicted RBP21.59■■□□□ 1.05
CPSF7-204ENST00000413232 HELQQ8TDG4 1101 aa21.59■■□□□ 1.05
CPSF7-204ENST00000413232 HAS1Q92839 578 aa21.59■■□□□ 1.05
CPSF7-204ENST00000413232 SLKQ9H2G2 1235 aaPredicted RBP21.59■■□□□ 1.05
CPSF7-204ENST00000413232 USP15Q9Y4E8 981 aaPredicted RBP21.59■■□□□ 1.05
CPSF7-204ENST00000413232 ARID2Q68CP9 1835 aa21.59■■□□□ 1.05
CPSF7-204ENST00000413232 FAM205CA6NFA0 338 aa21.58■■□□□ 1.05
CPSF7-204ENST00000413232 PFKFB2O60825 505 aa21.58■■□□□ 1.05
CPSF7-204ENST00000413232 NPEPPSP55786 919 aa21.58■■□□□ 1.05
CPSF7-204ENST00000413232 PSMC5P62195 406 aa21.58■■□□□ 1.05
CPSF7-204ENST00000413232 PPP2R5CQ13362 524 aa21.58■■□□□ 1.05
CPSF7-204ENST00000413232 CSPP1Q1MSJ5 1256 aa21.58■■□□□ 1.05
CPSF7-204ENST00000413232 LRRC43Q8N309 656 aa21.58■■□□□ 1.05
CPSF7-204ENST00000413232 GCOM2Q9BZD3 368 aaPredicted RBP21.58■■□□□ 1.05
CPSF7-204ENST00000413232 SUCLA2Q9P2R7 463 aaPredicted RBP21.58■■□□□ 1.05
CPSF7-204ENST00000413232 LZTS1Q9Y250 596 aa21.58■■□□□ 1.05
CPSF7-204ENST00000413232 ARIH1Q9Y4X5 557 aaPredicted RBP21.58■■□□□ 1.05
CPSF7-204ENST00000413232 MEIS3P2A8K0S8 358 aa21.57■■□□□ 1.04
CPSF7-204ENST00000413232 HOXA2O43364 376 aa21.57■■□□□ 1.04
CPSF7-204ENST00000413232 EOMESO95936 686 aa21.57■■□□□ 1.04
CPSF7-204ENST00000413232 LONRF3Q496Y0 759 aa21.57■■□□□ 1.04
CPSF7-204ENST00000413232 PIK3AP1Q6ZUJ8 805 aa21.57■■□□□ 1.04
CPSF7-204ENST00000413232 NEK8Q86SG6 692 aa21.57■■□□□ 1.04
CPSF7-204ENST00000413232 RHPN2Q8IUC4 686 aa21.57■■□□□ 1.04
CPSF7-204ENST00000413232 ABI1Q8IZP0 508 aa21.57■■□□□ 1.04
CPSF7-204ENST00000413232 LPPQ93052 612 aa21.57■■□□□ 1.04
CPSF7-204ENST00000413232 ZNF558Q96NG5 402 aa21.57■■□□□ 1.04
CPSF7-204ENST00000413232 POP1Q99575 1024 aaKnown RBP21.57■■□□□ 1.04
CPSF7-204ENST00000413232 TCF25Q9BQ70 676 aa21.57■■□□□ 1.04
CPSF7-204ENST00000413232 STK36Q9NRP7 1315 aa21.56■■□□□ 1.04
CPSF7-204ENST00000413232 CCDC194A0A1B0GVG4 234 aa21.56■■□□□ 1.04
CPSF7-204ENST00000413232 NT5C1B-RDH14C9J2C7 533 aa21.56■■□□□ 1.04
CPSF7-204ENST00000413232 FDPSP14324 419 aaKnown RBP21.56■■□□□ 1.04
CPSF7-204ENST00000413232 PHKA2P46019 1235 aa21.56■■□□□ 1.04
CPSF7-204ENST00000413232 HERC4Q5GLZ8 1057 aaPredicted RBP21.56■■□□□ 1.04
CPSF7-204ENST00000413232 PPP4R3AQ6IN85 833 aa21.56■■□□□ 1.04
CPSF7-204ENST00000413232 PDE12Q6L8Q7 609 aaKnown RBP21.56■■□□□ 1.04
CPSF7-204ENST00000413232 SLC39A11Q8N1S5 342 aa21.56■■□□□ 1.04
CPSF7-204ENST00000413232 CYP26B1Q9NR63 512 aa21.56■■□□□ 1.04
CPSF7-204ENST00000413232 LOC730098B7Z3J9 87 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 LARGE1O95461 756 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 QARSP47897 775 aaKnown RBP21.55■■□□□ 1.04
CPSF7-204ENST00000413232 DNM2P50570 870 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 AK2P54819 239 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 SYCE2Q6PIF2 218 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 TMEM184AQ6ZMB5 413 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 NECAB1Q8N987 351 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 SUSD6Q92537 303 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 FAM20AQ96MK3 541 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 NLRP4Q96MN2 994 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 CDCA3Q99618 268 aaPredicted RBP21.55■■□□□ 1.04
CPSF7-204ENST00000413232 S1PR5Q9H228 398 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 IFT122Q9HBG6 1241 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 ENTPD7Q9NQZ7 604 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 CHST12Q9NRB3 414 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 DACT1Q9NYF0 836 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 SPG21Q9NZD8 308 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 RGL1Q9NZL6 768 aa21.55■■□□□ 1.04
CPSF7-204ENST00000413232 ZBTB39O15060 712 aa21.54■■□□□ 1.04
CPSF7-204ENST00000413232 CCNT1O60563 726 aaKnown RBP21.54■■□□□ 1.04
CPSF7-204ENST00000413232 CDKL5O76039 1030 aa21.54■■□□□ 1.04
CPSF7-204ENST00000413232 CDC42EP1Q00587 391 aa21.54■■□□□ 1.04
CPSF7-204ENST00000413232 SPIRE1Q08AE8 756 aa21.54■■□□□ 1.04
CPSF7-204ENST00000413232 NR5A1Q13285 461 aa21.54■■□□□ 1.04
CPSF7-204ENST00000413232 LLGL2Q6P1M3 1020 aa21.54■■□□□ 1.04
CPSF7-204ENST00000413232 HFE2Q6ZVN8 426 aa21.54■■□□□ 1.04
CPSF7-204ENST00000413232 ZNF410Q86VK4 478 aa21.54■■□□□ 1.04
CPSF7-204ENST00000413232 TMEM173Q86WV6 379 aaPredicted RBP21.54■■□□□ 1.04
CPSF7-204ENST00000413232 POTEDQ86YR6 584 aa21.54■■□□□ 1.04
CPSF7-204ENST00000413232 TRAIPQ9BWF2 469 aa21.54■■□□□ 1.04
CPSF7-204ENST00000413232 APOL5Q9BWW9 433 aa21.54■■□□□ 1.04
CPSF7-204ENST00000413232 ORC3Q9UBD5 711 aaPredicted RBP21.54■■□□□ 1.04
CPSF7-204ENST00000413232 PUF60Q9UHX1 559 aaKnown RBP21.54■■□□□ 1.04
CPSF7-204ENST00000413232 CDH22Q9UJ99 828 aa21.54■■□□□ 1.04
CPSF7-204ENST00000413232 P4HBP07237 508 aaKnown RBP21.53■■□□□ 1.04
CPSF7-204ENST00000413232 BCAR1P56945 870 aa21.53■■□□□ 1.04
CPSF7-204ENST00000413232 CBX2Q14781 532 aaPredicted RBP21.53■■□□□ 1.04
CPSF7-204ENST00000413232 ME3Q16798 604 aa21.53■■□□□ 1.04
CPSF7-204ENST00000413232 TWF2Q6IBS0 349 aaKnown RBP21.53■■□□□ 1.04
CPSF7-204ENST00000413232 ANKRD54Q6NXT1 300 aa21.53■■□□□ 1.04
CPSF7-204ENST00000413232 TMC7Q7Z402 723 aa21.53■■□□□ 1.04
CPSF7-204ENST00000413232 TNFRSF25Q93038 417 aa21.53■■□□□ 1.04
CPSF7-204ENST00000413232 TMEM143Q96AN5 459 aa21.53■■□□□ 1.04
CPSF7-204ENST00000413232 DHX33Q9H6R0 707 aaKnown RBP21.53■■□□□ 1.04
CPSF7-204ENST00000413232 MINDY3Q9H8M7 445 aa21.53■■□□□ 1.04
CPSF7-204ENST00000413232 NGRNQ9NPE2 291 aaKnown RBP21.53■■□□□ 1.04
CPSF7-204ENST00000413232 BMP2KQ9NSY1 1161 aaPredicted RBP21.53■■□□□ 1.04
CPSF7-204ENST00000413232 PIN4Q9Y237 131 aaKnown RBP21.53■■□□□ 1.04
CPSF7-204ENST00000413232 B4GALT3O60512 393 aa21.52■■□□□ 1.04
CPSF7-204ENST00000413232 GCFC2P16383 781 aaKnown RBP21.52■■□□□ 1.04
CPSF7-204ENST00000413232 SFPQP23246 707 aaKnown RBP eCLIP21.52■■□□□ 1.04
CPSF7-204ENST00000413232 HOXD11P31277 338 aaPredicted RBP21.52■■□□□ 1.04
CPSF7-204ENST00000413232 PPM1AP35813 382 aa21.52■■□□□ 1.04
CPSF7-204ENST00000413232 TECP42680 631 aa21.52■■□□□ 1.04
CPSF7-204ENST00000413232 KRT17Q04695 432 aa21.52■■□□□ 1.04
CPSF7-204ENST00000413232 MRPL43Q8N983 215 aaKnown RBP21.52■■□□□ 1.04
CPSF7-204ENST00000413232 RPGRIP1Q96KN7 1286 aa21.52■■□□□ 1.04
CPSF7-204ENST00000413232 CEP170P1Q96L14 293 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms