RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 DCXO43602 365 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 SLC37A4O43826 429 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 TBX10O75333 385 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 CSPG5O95196 566 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 ALDH7A1P49419 539 aaKnown RBP16.27■□□□□ 0.2
MCF2L-210ENST00000409954 ERVFC1P60507 584 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 DRP2Q13474 957 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.2
MCF2L-210ENST00000409954 CLUL1Q15846 466 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 LRRC55Q6ZSA7 311 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 PIK3AP1Q6ZUJ8 805 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 ADGRD2Q7Z7M1 963 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 ZNF598Q86UK7 904 aaKnown RBP16.27■□□□□ 0.2
MCF2L-210ENST00000409954 RHPN2Q8IUC4 686 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 C4orf19Q8IY42 314 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 SLC7A3Q8WY07 619 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 FDXACB1Q9BRP7 624 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-210ENST00000409954 MRPL9Q9BYD2 267 aaKnown RBP16.27■□□□□ 0.2
MCF2L-210ENST00000409954 CLEC1BQ9P126 229 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 HCN4Q9Y3Q4 1203 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 REV3LO60673 3130 aa16.27■□□□□ 0.19
MCF2L-210ENST00000409954 EML1O00423 815 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 FSCN2O14926 492 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 ZNF623O75123 536 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 SRGAP2BP0DMP2 458 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 AK2P54819 239 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 DUSP6Q16828 381 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 TMEM184AQ6ZMB5 413 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 RNF169Q8NCN4 708 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 SMRP1Q8NCR6 262 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 HAS1Q92839 578 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 CEP170P1Q96L14 293 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 C11orf16Q9NQ32 467 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 RNF19AQ9NV58 838 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 VAV3Q9UKW4 847 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 EVPLQ92817 2033 aa16.26■□□□□ 0.19
MCF2L-210ENST00000409954 MYH9P35579 1960 aaKnown RBP16.26■□□□□ 0.19
MCF2L-210ENST00000409954 PER2O15055 1255 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 GAS2O43903 313 aaKnown RBP16.25■□□□□ 0.19
MCF2L-210ENST00000409954 CSDE1O75534 798 aaKnown RBP16.25■□□□□ 0.19
MCF2L-210ENST00000409954 CTDNEP1O95476 244 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 FGFR4P22455 802 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 KRT2P35908 639 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 RFC5P40937 340 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 PHKA2P46019 1235 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 TMC7Q7Z402 723 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 SRGAP1Q7Z6B7 1085 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 OXER1Q8TDS5 423 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 TCP11Q8WWU5 503 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 FAM122AQ96E09 287 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 SH2D3AQ9BRG2 576 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 ZSWIM4Q9H7M6 989 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 RAPGEFL1Q9UHV5 662 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 PCDHA12Q9UN75 941 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 NLRC5Q86WI3 1866 aa16.25■□□□□ 0.19
MCF2L-210ENST00000409954 TMEM150BA6NC51 233 aa16.24■□□□□ 0.19
MCF2L-210ENST00000409954 FDPSP14324 419 aaKnown RBP16.24■□□□□ 0.19
MCF2L-210ENST00000409954 RAB27AP51159 221 aa16.24■□□□□ 0.19
MCF2L-210ENST00000409954 POLGP54098 1239 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-210ENST00000409954 NPEPPSP55786 919 aa16.24■□□□□ 0.19
MCF2L-210ENST00000409954 CLLU1OSQ5K130 101 aa16.24■□□□□ 0.19
MCF2L-210ENST00000409954 TWF2Q6IBS0 349 aaKnown RBP16.24■□□□□ 0.19
MCF2L-210ENST00000409954 CATSPER4Q7RTX7 472 aa16.24■□□□□ 0.19
MCF2L-210ENST00000409954 PRPF31Q8WWY3 499 aaKnown RBP16.24■□□□□ 0.19
MCF2L-210ENST00000409954 PSPC1Q8WXF1 523 aaKnown RBP16.24■□□□□ 0.19
MCF2L-210ENST00000409954 PGBD4Q96DM1 585 aa16.24■□□□□ 0.19
MCF2L-210ENST00000409954 TCF25Q9BQ70 676 aa16.24■□□□□ 0.19
MCF2L-210ENST00000409954 DHX33Q9H6R0 707 aaKnown RBP16.24■□□□□ 0.19
MCF2L-210ENST00000409954 GJB4Q9NTQ9 266 aa16.24■□□□□ 0.19
MCF2L-210ENST00000409954 GLP2RO95838 553 aa16.23■□□□□ 0.19
MCF2L-210ENST00000409954 HOXB8P17481 243 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-210ENST00000409954 ATF7P17544 494 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-210ENST00000409954 YWHABP31946 246 aaKnown RBP16.23■□□□□ 0.19
MCF2L-210ENST00000409954 NEK4P51957 841 aa16.23■□□□□ 0.19
MCF2L-210ENST00000409954 PCBP1Q15365 356 aaKnown RBP eCLIP16.23■□□□□ 0.19
MCF2L-210ENST00000409954 ME3Q16798 604 aa16.23■□□□□ 0.19
MCF2L-210ENST00000409954 HERC4Q5GLZ8 1057 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-210ENST00000409954 GLB1LQ6UWU2 654 aa16.23■□□□□ 0.19
MCF2L-210ENST00000409954 SLC39A11Q8N1S5 342 aa16.23■□□□□ 0.19
MCF2L-210ENST00000409954 MRPL43Q8N983 215 aaKnown RBP16.23■□□□□ 0.19
MCF2L-210ENST00000409954 HELQQ8TDG4 1101 aa16.23■□□□□ 0.19
MCF2L-210ENST00000409954 NLRP4Q96MN2 994 aa16.23■□□□□ 0.19
MCF2L-210ENST00000409954 PHF7Q9BWX1 381 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-210ENST00000409954 IFT122Q9HBG6 1241 aa16.23■□□□□ 0.19
MCF2L-210ENST00000409954 ENTPD7Q9NQZ7 604 aa16.23■□□□□ 0.19
MCF2L-210ENST00000409954 HCSTQ9UBK5 93 aa16.23■□□□□ 0.19
MCF2L-210ENST00000409954 PIN4Q9Y237 131 aaKnown RBP16.23■□□□□ 0.19
MCF2L-210ENST00000409954 COL4A3BPQ9Y5P4 624 aa16.23■□□□□ 0.19
MCF2L-210ENST00000409954 FAM86C2PA6NEL3 165 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 SLITRK3O94933 977 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 PLA2G5P39877 138 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 BCAR1P56945 870 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 POU5F1BQ06416 359 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 NCBP1Q09161 790 aaKnown RBP16.22■□□□□ 0.19
MCF2L-210ENST00000409954 KCNC3Q14003 757 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 TRIM29Q14134 588 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 XKR9Q5GH70 373 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 PLA2G4FQ68DD2 849 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 RNF135Q8IUD6 432 aa16.22■□□□□ 0.19
MCF2L-210ENST00000409954 KSR1Q8IVT5 923 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms