RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 HERC4Q5GLZ8 1057 aaPredicted RBP22.62■■□□□ 1.21
VSX1-203ENST00000409285 ODR4Q5SWX8 454 aa22.62■■□□□ 1.21
VSX1-203ENST00000409285 SFR1Q86XK3 245 aa22.62■■□□□ 1.21
VSX1-203ENST00000409285 MYCT1Q8N699 235 aa22.62■■□□□ 1.21
VSX1-203ENST00000409285 ASAP3Q8TDY4 903 aa22.62■■□□□ 1.21
VSX1-203ENST00000409285 BSNDQ8WZ55 320 aa22.62■■□□□ 1.21
VSX1-203ENST00000409285 NOD1Q9Y239 953 aa22.62■■□□□ 1.21
VSX1-203ENST00000409285 ABCD1P33897 745 aa22.61■■□□□ 1.21
VSX1-203ENST00000409285 NCKAP1LP55160 1127 aa22.61■■□□□ 1.21
VSX1-203ENST00000409285 CAPSQ13938 189 aa22.61■■□□□ 1.21
VSX1-203ENST00000409285 FAM26FQ5R3K3 315 aa22.61■■□□□ 1.21
VSX1-203ENST00000409285 CDCA2Q69YH5 1023 aaPredicted RBP22.61■■□□□ 1.21
VSX1-203ENST00000409285 RSPH3Q86UC2 560 aa22.61■■□□□ 1.21
VSX1-203ENST00000409285 ZNF410Q86VK4 478 aa22.61■■□□□ 1.21
VSX1-203ENST00000409285 FAM178BQ8IXR5 827 aa22.61■■□□□ 1.21
VSX1-203ENST00000409285 DNAJB3Q8WWF6 145 aa22.61■■□□□ 1.21
VSX1-203ENST00000409285 TRPV6Q9H1D0 765 aa22.61■■□□□ 1.21
VSX1-203ENST00000409285 MAN1B1Q9UKM7 699 aa22.61■■□□□ 1.21
VSX1-203ENST00000409285 AKT3Q9Y243 479 aa22.61■■□□□ 1.21
VSX1-203ENST00000409285 SFI1A8K8P3 1242 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 H0YCG3 227 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 TLR3O15455 904 aaKnown RBP22.6■■□□□ 1.21
VSX1-203ENST00000409285 NPTX2P47972 431 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 GPC3P51654 580 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 SMTNP53814 917 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 PEX3P56589 373 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 MORC3Q14149 939 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 TFDP1Q14186 410 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 TRIM71Q2Q1W2 868 aaKnown RBP22.6■■□□□ 1.21
VSX1-203ENST00000409285 COBLL1Q53SF7 1204 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 IFNLR1Q8IU57 520 aaPredicted RBP22.6■■□□□ 1.21
VSX1-203ENST00000409285 RHPN2Q8IUC4 686 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 FAM49AQ9H0Q0 323 aaPredicted RBP22.6■■□□□ 1.21
VSX1-203ENST00000409285 ZHX3Q9H4I2 956 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 POLD4Q9HCU8 107 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 ARHGAP28Q9P2N2 729 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 PPP1R37O75864 691 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 ATN1P54259 1190 aaPredicted RBP22.6■■□□□ 1.21
VSX1-203ENST00000409285 ALCAMQ13740 583 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 ZSCAN23Q3MJ62 389 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 ZNF658Q5TYW1 1059 aaPredicted RBP22.6■■□□□ 1.21
VSX1-203ENST00000409285 CAGE1Q8TC20 777 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 DHX38Q92620 1227 aaKnown RBP22.6■■□□□ 1.21
VSX1-203ENST00000409285 WNT8BQ93098 351 aa22.6■■□□□ 1.21
VSX1-203ENST00000409285 PHLPP2Q6ZVD8 1323 aa22.59■■□□□ 1.21
VSX1-203ENST00000409285 GPR32O75388 356 aa22.59■■□□□ 1.21
VSX1-203ENST00000409285 VTNP04004 478 aa22.59■■□□□ 1.21
VSX1-203ENST00000409285 TRIM60Q495X7 471 aa22.59■■□□□ 1.21
VSX1-203ENST00000409285 ZNF720Q7Z2F6 126 aa22.59■■□□□ 1.21
VSX1-203ENST00000409285 KIAA0895Q8NCT3 520 aa22.59■■□□□ 1.21
VSX1-203ENST00000409285 STRA6Q9BX79 667 aa22.59■■□□□ 1.21
VSX1-203ENST00000409285 C2orf40Q9H1Z8 148 aa22.59■■□□□ 1.21
VSX1-203ENST00000409285 ADAMTS10Q9H324 1103 aa22.59■■□□□ 1.21
VSX1-203ENST00000409285 MRPL44Q9H9J2 332 aaKnown RBP22.59■■□□□ 1.21
VSX1-203ENST00000409285 KMT5AQ9NQR1 393 aa22.59■■□□□ 1.21
VSX1-203ENST00000409285 UBE4BO95155 1302 aa22.58■■□□□ 1.21
VSX1-203ENST00000409285 ADGRA3Q8IWK6 1321 aa22.58■■□□□ 1.21
VSX1-203ENST00000409285 DCDC2CA8MYV0 355 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 PITPNM1O00562 1244 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 PQBP1O60828 265 aaKnown RBP22.58■■□□□ 1.2
VSX1-203ENST00000409285 EFNA5P52803 228 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 PTENP60484 403 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 MRPS6P82932 125 aaKnown RBP22.58■■□□□ 1.2
VSX1-203ENST00000409285 STK4Q13043 487 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 LRRC26Q2I0M4 334 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 FAM26DQ5JW98 314 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 EPM2AIP1Q7L775 607 aaPredicted RBP22.58■■□□□ 1.2
VSX1-203ENST00000409285 KSR1Q8IVT5 923 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 CCDC155Q8N6L0 562 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 RNF149Q8NC42 400 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 TMEM161BQ8NDZ6 487 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 HVCN1Q96D96 273 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 IFT122Q9HBG6 1241 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 SCN5AQ14524 2016 aa22.58■■□□□ 1.2
VSX1-203ENST00000409285 PDE4DIPQ5VU43 2346 aa22.57■■□□□ 1.2
VSX1-203ENST00000409285 EIF3DO15371 548 aaKnown RBP eCLIP22.57■■□□□ 1.2
VSX1-203ENST00000409285 BMP6P22004 513 aa22.57■■□□□ 1.2
VSX1-203ENST00000409285 PHKA2P46019 1235 aa22.57■■□□□ 1.2
VSX1-203ENST00000409285 NLRP11P59045 1033 aaKnown RBP22.57■■□□□ 1.2
VSX1-203ENST00000409285 GTF2BQ00403 316 aa22.57■■□□□ 1.2
VSX1-203ENST00000409285 MLLT1Q03111 559 aaPredicted RBP22.57■■□□□ 1.2
VSX1-203ENST00000409285 FAAP100Q0VG06 881 aa22.57■■□□□ 1.2
VSX1-203ENST00000409285 BMT2Q1RMZ1 405 aa22.57■■□□□ 1.2
VSX1-203ENST00000409285 STXBP4Q6ZWJ1 553 aa22.57■■□□□ 1.2
VSX1-203ENST00000409285 NLRP4Q96MN2 994 aa22.57■■□□□ 1.2
VSX1-203ENST00000409285 LTBP2Q14767 1821 aa22.57■■□□□ 1.2
VSX1-203ENST00000409285 LRRIQ4A6NIV6 560 aa22.56■■□□□ 1.2
VSX1-203ENST00000409285 CCDC169A6NNP5 214 aa22.56■■□□□ 1.2
VSX1-203ENST00000409285 K7ENM7 598 aa22.56■■□□□ 1.2
VSX1-203ENST00000409285 TLE2Q04725 743 aa22.56■■□□□ 1.2
VSX1-203ENST00000409285 MGAT3Q09327 533 aa22.56■■□□□ 1.2
VSX1-203ENST00000409285 PCBP1Q15365 356 aaKnown RBP eCLIP22.56■■□□□ 1.2
VSX1-203ENST00000409285 HAUS6Q7Z4H7 955 aa22.56■■□□□ 1.2
VSX1-203ENST00000409285 DEPTORQ8TB45 409 aa22.56■■□□□ 1.2
VSX1-203ENST00000409285 HPS3Q969F9 1004 aa22.56■■□□□ 1.2
VSX1-203ENST00000409285 TMEM134Q9H6X4 195 aa22.56■■□□□ 1.2
VSX1-203ENST00000409285 SYCE3A1L190 88 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 M0QZ92 97 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 SLC16A4O15374 487 aa22.55■■□□□ 1.2
VSX1-203ENST00000409285 SRGAP2CP0DJJ0 459 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms