RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 GPKOWQ92917 476 aaPredicted RBP eCLIP12.91□□□□□ -0.34
SHANK2-203ENST00000409161 MAML3Q96JK9 1138 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 MRPL1Q9BYD6 325 aaKnown RBP12.91□□□□□ -0.34
SHANK2-203ENST00000409161 NSMCE4AQ9NXX6 385 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 IL1RAPL1Q9NZN1 696 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 ITGB1BP2Q9UKP3 347 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 PLEKHG3A1L390 1219 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 PJA2O43164 708 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 FBXW4P57775 412 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 FAM47AQ5JRC9 791 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 CEP78Q5JTW2 689 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 RRM2BQ7LG56 351 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 ASCC2Q9H1I8 757 aaPredicted RBP12.91□□□□□ -0.34
SHANK2-203ENST00000409161 KDM5CP41229 1560 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 ERVV-2B6SEH9 535 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 GOLGA8SH3BPF8 625 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 TOMM70O94826 608 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 EPS8L2Q9H6S3 715 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 AP4S1Q9Y587 144 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 USP14P54578 494 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 SUGT1Q9Y2Z0 365 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 E5RI56 91 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 DNAJC6O75061 913 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 GIMAP8Q8ND71 665 aaPredicted RBP12.91□□□□□ -0.34
SHANK2-203ENST00000409161 ZNF594Q96JF6 807 aaPredicted RBP12.91□□□□□ -0.34
SHANK2-203ENST00000409161 AP1M1Q9BXS5 423 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 APOA4P06727 396 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 PPP6R3Q5H9R7 873 aaPredicted RBP12.91□□□□□ -0.34
SHANK2-203ENST00000409161 SZRD1Q7Z422 152 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 KLHL8Q9P2G9 620 aaPredicted RBP12.91□□□□□ -0.34
SHANK2-203ENST00000409161 TOM1O60784 492 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 CENPPQ6IPU0 288 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 KIF20BQ96Q89 1820 aa12.91□□□□□ -0.34
SHANK2-203ENST00000409161 PALMO75781 387 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 RESP18Q5W5W9 173 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 NOP9Q86U38 636 aaKnown RBP12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ERICH1Q86X53 443 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 TAB3Q8N5C8 712 aaPredicted RBP12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ZNF280CQ8ND82 737 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 RPF1Q9H9Y2 349 aaKnown RBP12.9□□□□□ -0.34
SHANK2-203ENST00000409161 PCDHGB4Q9UN71 923 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ORC4O43929 436 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ALAS1P13196 640 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 RUBCNLQ9H714 662 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 TSPOAP1O95153 1857 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 KRT31Q15323 416 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ABCB5Q2M3G0 1257 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 C11orf57Q6ZUT1 292 aaPredicted RBP12.9□□□□□ -0.34
SHANK2-203ENST00000409161 SETD3Q86TU7 594 aaPredicted RBP12.9□□□□□ -0.34
SHANK2-203ENST00000409161 RMDN1Q96DB5 314 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 MMTAG2Q9BU76 263 aaKnown RBP12.9□□□□□ -0.34
SHANK2-203ENST00000409161 CAB39Q9Y376 341 aaPredicted RBP12.9□□□□□ -0.34
SHANK2-203ENST00000409161 PGM1P36871 562 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 GPC5P78333 572 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ARHGEF6Q15052 776 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ZBTB38Q8NAP3 1195 aaPredicted RBP12.9□□□□□ -0.34
SHANK2-203ENST00000409161 MOV10L1Q9BXT6 1211 aaKnown RBP12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ADNPQ9H2P0 1102 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 OSBPL3Q9H4L5 887 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 GPR108Q9NPR9 543 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ST13P50502 369 aaKnown RBP12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ATP7AQ04656 1500 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 WASHC5Q12768 1159 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 LAMC2Q13753 1193 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 RAB42Q8N4Z0 105 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 RSPH1Q8WYR4 309 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 FOXP3Q9BZS1 431 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ZSCAN32Q9NX65 697 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 UVRAGQ9P2Y5 699 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 DCDC2Q9UHG0 476 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ITM2BQ9Y287 266 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 LRRC8EQ6NSJ5 796 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 MAP4K1Q92918 833 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ANKRD27Q96NW4 1050 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 TSSK1BQ9BXA7 367 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 CCDC87Q9NVE4 849 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 PDP2Q9P2J9 529 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ANAPC7Q9UJX3 599 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 CCNL1Q9UK58 526 aaPredicted RBP12.9□□□□□ -0.34
SHANK2-203ENST00000409161 LGALS16A8MUM7 142 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 E7ENQ6 273 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 ADD1P35611 737 aaKnown RBP12.9□□□□□ -0.34
SHANK2-203ENST00000409161 TP53BP2Q13625 1128 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 CYTH1Q15438 398 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 PCYOX1LQ8NBM8 494 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 NDUFA13Q9P0J0 144 aa12.9□□□□□ -0.34
SHANK2-203ENST00000409161 TAF5LO75529 589 aa12.9□□□□□ -0.35
SHANK2-203ENST00000409161 CSTF3Q12996 717 aaKnown RBP12.9□□□□□ -0.35
SHANK2-203ENST00000409161 STAT4Q14765 748 aa12.9□□□□□ -0.35
SHANK2-203ENST00000409161 ENOSF1Q7L5Y1 443 aa12.9□□□□□ -0.35
SHANK2-203ENST00000409161 LINC00301Q8NCQ3 95 aa12.9□□□□□ -0.35
SHANK2-203ENST00000409161 EMILIN3Q9NT22 766 aa12.9□□□□□ -0.35
SHANK2-203ENST00000409161 PSAPP07602 524 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 SLC44A4Q53GD3 710 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 ST13P5Q8NFI4 369 aaPredicted RBP12.89□□□□□ -0.35
SHANK2-203ENST00000409161 KCNK16Q96T55 309 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 ZSCAN9O15535 394 aaPredicted RBP12.89□□□□□ -0.35
SHANK2-203ENST00000409161 GCP02774 474 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 KCNA1Q09470 495 aa12.89□□□□□ -0.35
SHANK2-203ENST00000409161 AARS2Q5JTZ9 985 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms