RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 SYMPKQ92797 1274 aaKnown RBP16.19■□□□□ 0.18
CDPF1-203ENST00000404583 PBX4Q9BYU1 374 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 CCSER1Q9C0I3 900 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 POLR3FQ9H1D9 316 aaPredicted RBP16.19■□□□□ 0.18
CDPF1-203ENST00000404583 CFAP45Q9UL16 551 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 TTC3P53804 2025 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 SLC26A4O43511 780 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 MGEA5O60502 916 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 AMHP03971 560 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 SSBP05455 408 aaKnown RBP eCLIP16.19■□□□□ 0.18
CDPF1-203ENST00000404583 PLCG1P19174 1290 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 GLRA2P23416 452 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 DDIT3P35638 169 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 MXD4Q14582 209 aaPredicted RBP16.19■□□□□ 0.18
CDPF1-203ENST00000404583 ODR4Q5SWX8 454 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 RINT1Q6NUQ1 792 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 GPR153Q6NV75 609 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 FAM117BQ6P1L5 589 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 HERC6Q8IVU3 1022 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 KCTD17Q8N5Z5 321 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 SLC17A8Q8NDX2 589 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 FTHL17Q9BXU8 183 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 UNC80Q8N2C7 3258 aa16.18■□□□□ 0.18
CDPF1-203ENST00000404583 MYH11P35749 1972 aa16.18■□□□□ 0.18
CDPF1-203ENST00000404583 UPP2O95045 317 aa16.18■□□□□ 0.18
CDPF1-203ENST00000404583 PLA2G4BP0C869 781 aa16.18■□□□□ 0.18
CDPF1-203ENST00000404583 MYOGP15173 224 aa16.18■□□□□ 0.18
CDPF1-203ENST00000404583 ANP32AP39687 249 aaKnown RBP16.18■□□□□ 0.18
CDPF1-203ENST00000404583 CAPSQ13938 189 aa16.18■□□□□ 0.18
CDPF1-203ENST00000404583 SYT2Q8N9I0 419 aaPredicted RBP16.18■□□□□ 0.18
CDPF1-203ENST00000404583 TOP1MTQ969P6 601 aa16.18■□□□□ 0.18
CDPF1-203ENST00000404583 RUSC1Q9BVN2 902 aa16.18■□□□□ 0.18
CDPF1-203ENST00000404583 INO80BQ9C086 356 aaPredicted RBP16.18■□□□□ 0.18
CDPF1-203ENST00000404583 MINDY3Q9H8M7 445 aa16.18■□□□□ 0.18
CDPF1-203ENST00000404583 RCOR1Q9UKL0 485 aa16.18■□□□□ 0.18
CDPF1-203ENST00000404583 A0A0C4DFX4 3053 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 NCLP19338 710 aaKnown RBP16.17■□□□□ 0.18
CDPF1-203ENST00000404583 DNAJB2P25686 324 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 SLC12A3P55017 1021 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 NUCB2P80303 420 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 DHX8Q14562 1220 aaKnown RBP16.17■□□□□ 0.18
CDPF1-203ENST00000404583 C1orf186Q6ZWK4 172 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 SRGAP1Q7Z6B7 1085 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 KCNG4Q8TDN1 519 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 ADAM2Q99965 735 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 ZBED2Q9BTP6 218 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 PANK2Q9BZ23 570 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 TSPYL2Q9H2G4 693 aaPredicted RBP16.17■□□□□ 0.18
CDPF1-203ENST00000404583 TSHZ2Q9NRE2 1034 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 BLOC1S4Q9NUP1 217 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 CCDC39Q9UFE4 941 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 MSRAQ9UJ68 235 aa16.17■□□□□ 0.18
CDPF1-203ENST00000404583 YBX2Q9Y2T7 364 aaKnown RBP16.17■□□□□ 0.18
CDPF1-203ENST00000404583 DENND3A2RUS2 1198 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 CUTAO60888 179 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 GJB5O95377 273 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 IBSPP21815 317 aaPredicted RBP16.16■□□□□ 0.18
CDPF1-203ENST00000404583 TXLNAP40222 546 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 PHKA2P46019 1235 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 PTENP60484 403 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 KRT85P78386 507 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 RAD51AP2Q09MP3 1159 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 TFDP1Q14186 410 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 MCM6Q14566 821 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 DSC3Q14574 896 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 AXDND1Q5T1B0 1012 aaPredicted RBP16.16■□□□□ 0.18
CDPF1-203ENST00000404583 CATSPER4Q7RTX7 472 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 BSNDQ8WZ55 320 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 RAD54LQ92698 747 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 RGS18Q9NS28 235 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 PCDHA7Q9UN72 937 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 PCDHA11Q9Y5I1 949 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 ATP6V1DQ9Y5K8 247 aa16.16■□□□□ 0.18
CDPF1-203ENST00000404583 MYO9BQ13459 2157 aa16.15■□□□□ 0.18
CDPF1-203ENST00000404583 LRRIQ4A6NIV6 560 aa16.15■□□□□ 0.18
CDPF1-203ENST00000404583 TLL1O43897 1013 aa16.15■□□□□ 0.18
CDPF1-203ENST00000404583 HIP1RO75146 1068 aa16.15■□□□□ 0.18
CDPF1-203ENST00000404583 ZSCAN20P17040 1043 aaPredicted RBP16.15■□□□□ 0.18
CDPF1-203ENST00000404583 SFPQP23246 707 aaKnown RBP eCLIP16.15■□□□□ 0.18
CDPF1-203ENST00000404583 ME1P48163 572 aa16.15■□□□□ 0.18
CDPF1-203ENST00000404583 POU5F1BQ06416 359 aa16.15■□□□□ 0.18
CDPF1-203ENST00000404583 RAB30Q15771 203 aa16.15■□□□□ 0.18
CDPF1-203ENST00000404583 ARSHQ5FYA8 562 aa16.15■□□□□ 0.18
CDPF1-203ENST00000404583 SHC4Q6S5L8 630 aa16.15■□□□□ 0.18
CDPF1-203ENST00000404583 KIFAP3Q92845 792 aa16.15■□□□□ 0.18
CDPF1-203ENST00000404583 TIFAQ96CG3 184 aa16.15■□□□□ 0.18
CDPF1-203ENST00000404583 GUCD1Q96NT3 240 aa16.15■□□□□ 0.18
CDPF1-203ENST00000404583 NKX2-4Q9H2Z4 354 aa16.15■□□□□ 0.18
CDPF1-203ENST00000404583 A0A087X0B3 334 aa16.14■□□□□ 0.17
CDPF1-203ENST00000404583 NPHP3-ACAD11A0A0J9YXS1 232 aa16.14■□□□□ 0.17
CDPF1-203ENST00000404583 RRAGBQ5VZM2 374 aa16.14■□□□□ 0.17
CDPF1-203ENST00000404583 IFNLR1Q8IU57 520 aaPredicted RBP16.14■□□□□ 0.17
CDPF1-203ENST00000404583 DAW1Q8N136 415 aa16.14■□□□□ 0.17
CDPF1-203ENST00000404583 LEO1Q8WVC0 666 aaPredicted RBP16.14■□□□□ 0.17
CDPF1-203ENST00000404583 LARP4BQ92615 738 aaKnown RBP16.14■□□□□ 0.17
CDPF1-203ENST00000404583 SPATA32Q96LK8 384 aa16.14■□□□□ 0.17
CDPF1-203ENST00000404583 RAD9AQ99638 391 aa16.14■□□□□ 0.17
CDPF1-203ENST00000404583 LCHNA4D1U4 455 aa16.13■□□□□ 0.17
CDPF1-203ENST00000404583 SFI1A8K8P3 1242 aa16.13■□□□□ 0.17
CDPF1-203ENST00000404583 C9IYK1 514 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms