RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 COL22A1Q8NFW1 1626 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-201ENST00000401921 AGPSO00116 658 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 DDX3XO00571 662 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC9-201ENST00000401921 TTI1O43156 1089 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 LCA5LO95447 670 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 ITGA4P13612 1032 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 AARSP49588 968 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC9-201ENST00000401921 DHX9Q08211 1270 aaKnown RBP8.33□□□□□ -1.08
HDAC9-201ENST00000401921 EPHA7Q15375 998 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 TATDN1Q6P1N9 297 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 GMCL1P1Q8NEA9 526 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 TPCN2Q8NHX9 752 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 TAF1DQ9H5J8 278 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-201ENST00000401921 PLCB1Q9NQ66 1216 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 AGPAT3Q9NRZ7 376 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 ZNF70Q9UC06 446 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-201ENST00000401921 MYH7BA7E2Y1 1941 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 FOXN3O00409 490 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-201ENST00000401921 IRF6O14896 467 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 TGFB1I1O43294 461 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 BUB1BO60566 1050 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-201ENST00000401921 NR1D1P20393 614 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 PLTPP55058 493 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 HDLBPQ00341 1268 aaKnown RBP8.33□□□□□ -1.08
HDAC9-201ENST00000401921 SPIRE1Q08AE8 756 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 BIRC2Q13490 618 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 CBWD6Q4V339 395 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 CBWD3Q5JTY5 395 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 CBWD5Q5RIA9 395 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 ZNF720Q7Z2F6 126 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 CDAN1Q8IWY9 1227 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 OTUD6BQ8N6M0 293 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 LENG9Q96B70 501 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 SELENOSQ9BQE4 189 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC9-201ENST00000401921 AJAP1Q9UKB5 411 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-201ENST00000401921 PTPN22Q9Y2R2 807 aa8.33□□□□□ -1.08
HDAC9-201ENST00000401921 BACH1O14867 736 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 FTLP02792 175 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-201ENST00000401921 HARSP12081 509 aaKnown RBP8.32□□□□□ -1.08
HDAC9-201ENST00000401921 POLD1P28340 1107 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 NPEPPSP55786 919 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 PRKG1Q13976 671 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 WHAMMQ8TF30 809 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 SAAL1Q96ER3 474 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 TRIM51Q9BSJ1 452 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 VCPKMTQ9H867 229 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 GPRC5CQ9NQ84 441 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 VAV3Q9UKW4 847 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 PCDHGC5Q9Y5F6 944 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 HOXD13P35453 343 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 MXI1P50539 228 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 SMTNP53814 917 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 BFSP1Q12934 665 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 TMEM132AQ24JP5 1023 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 SEL1L2Q5TEA6 688 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 ARHGEF16Q5VV41 709 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 MMS22LQ6ZRQ5 1243 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 NIM1KQ8IY84 436 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 CCDC105Q8IYK2 499 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 MAGOHBQ96A72 148 aaKnown RBP8.32□□□□□ -1.08
HDAC9-201ENST00000401921 SGSM3Q96HU1 749 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 STK33Q9BYT3 514 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 THAP2Q9H0W7 228 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 KCNH7Q9NS40 1196 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 APEX2Q9UBZ4 518 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 NOVA2Q9UNW9 492 aaKnown RBP8.32□□□□□ -1.08
HDAC9-201ENST00000401921 TMX2Q9Y320 296 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 SNX24Q9Y343 169 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-201ENST00000401921 GJA3Q9Y6H8 435 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 COL5A3P25940 1745 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-201ENST00000401921 DDX60LQ5H9U9 1706 aaKnown RBP8.32□□□□□ -1.08
HDAC9-201ENST00000401921 KLRG2A4D1S0 409 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-201ENST00000401921 NFIBO00712 420 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 SLC16A3O15427 465 aaKnown RBP8.32□□□□□ -1.08
HDAC9-201ENST00000401921 ASNSP08243 561 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 IBSPP21815 317 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-201ENST00000401921 VAMP7P51809 220 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 MARSP56192 900 aaKnown RBP8.32□□□□□ -1.08
HDAC9-201ENST00000401921 ITIH3Q06033 890 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 MTMR1Q13613 665 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 KIAA1755Q5JYT7 1200 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 ARHGAP27Q6ZUM4 889 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 C1orf186Q6ZWK4 172 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 FAM160B2Q86V87 743 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 RPUSD2Q8IZ73 545 aaKnown RBP8.32□□□□□ -1.08
HDAC9-201ENST00000401921 ARFGAP2Q8N6H7 521 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 UBL4BQ8N7F7 174 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 JDP2Q8WYK2 163 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 ACCSQ96QU6 501 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 HSD17B14Q9BPX1 270 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 CBWD1Q9BRT8 395 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 OLFML3Q9NRN5 406 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 STK32BQ9NY57 414 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 FBXL5Q9UKA1 691 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 DAAM1Q9Y4D1 1078 aa8.32□□□□□ -1.08
HDAC9-201ENST00000401921 NRAPQ86VF7 1730 aa8.31□□□□□ -1.08
HDAC9-201ENST00000401921 RBAK-RBAKDNI3L0D1 243 aa8.31□□□□□ -1.08
HDAC9-201ENST00000401921 ATMINO43313 823 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms