RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 STAT1P42224 750 aa17.16■□□□□ 0.34
CDC42-203ENST00000400259 TMEM132BQ14DG7 1078 aa17.16■□□□□ 0.34
CDC42-203ENST00000400259 CBWD6Q4V339 395 aa17.16■□□□□ 0.34
CDC42-203ENST00000400259 CBWD3Q5JTY5 395 aa17.16■□□□□ 0.34
CDC42-203ENST00000400259 CBWD5Q5RIA9 395 aa17.16■□□□□ 0.34
CDC42-203ENST00000400259 INTS8Q75QN2 995 aaKnown RBP17.16■□□□□ 0.34
CDC42-203ENST00000400259 NSUN6Q8TEA1 469 aaKnown RBP17.16■□□□□ 0.34
CDC42-203ENST00000400259 IWS1Q96ST2 819 aa17.16■□□□□ 0.34
CDC42-203ENST00000400259 STK33Q9BYT3 514 aa17.16■□□□□ 0.34
CDC42-203ENST00000400259 RNF14Q9UBS8 474 aa17.16■□□□□ 0.34
CDC42-203ENST00000400259 OTOFQ9HC10 1997 aa17.15■□□□□ 0.34
CDC42-203ENST00000400259 STAM2O75886 525 aa17.15■□□□□ 0.34
CDC42-203ENST00000400259 MYL7Q01449 175 aa17.15■□□□□ 0.34
CDC42-203ENST00000400259 NFRKBQ6P4R8 1299 aa17.15■□□□□ 0.34
CDC42-203ENST00000400259 HDXQ7Z353 690 aa17.15■□□□□ 0.34
CDC42-203ENST00000400259 HAUS6Q7Z4H7 955 aa17.15■□□□□ 0.34
CDC42-203ENST00000400259 RUBCNQ92622 972 aa17.15■□□□□ 0.34
CDC42-203ENST00000400259 HVCN1Q96D96 273 aa17.15■□□□□ 0.34
CDC42-203ENST00000400259 CCDC43Q96MW1 224 aaKnown RBP17.15■□□□□ 0.34
CDC42-203ENST00000400259 TEX13BQ9BXU2 312 aa17.15■□□□□ 0.34
CDC42-203ENST00000400259 PACSIN1Q9BY11 444 aa17.15■□□□□ 0.34
CDC42-203ENST00000400259 GGA3Q9NZ52 723 aa17.15■□□□□ 0.34
CDC42-203ENST00000400259 INTUQ9ULD6 942 aa17.15■□□□□ 0.34
CDC42-203ENST00000400259 NFASCO94856 1347 aa17.14■□□□□ 0.34
CDC42-203ENST00000400259 F8VZ95 297 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 KCNA2P16389 499 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 SOX5P35711 763 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 PRAMEF18Q5VWM3 479 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 GJB7Q6PEY0 223 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 MAEAQ7L5Y9 396 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 VPS36Q86VN1 386 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 GPC2Q8N158 579 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 FBXO41Q8TF61 875 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 INTS2Q9H0H0 1204 aaKnown RBP17.14■□□□□ 0.33
CDC42-203ENST00000400259 AFG3L2Q9Y4W6 797 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 PCDHA10Q9Y5I2 948 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 P4HA2O15460 535 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 PALMO75781 387 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 TRIM49P0CI25 452 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 TRIM49CP0CI26 452 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 KRT13P13646 458 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 FAM193AP78312 1265 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 R3HDM1Q15032 1099 aaKnown RBP17.14■□□□□ 0.33
CDC42-203ENST00000400259 ENOX2Q16206 610 aaKnown RBP17.14■□□□□ 0.33
CDC42-203ENST00000400259 SH3D19Q5HYK7 790 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 ALKBH5Q6P6C2 394 aaKnown RBP17.14■□□□□ 0.33
CDC42-203ENST00000400259 ACAD9Q9H845 621 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 CYP39A1Q9NYL5 469 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 TMOD4Q9NZQ9 345 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 APEX2Q9UBZ4 518 aa17.14■□□□□ 0.33
CDC42-203ENST00000400259 DKC1O60832 514 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDC42-203ENST00000400259 N4BP1O75113 896 aaKnown RBP17.13■□□□□ 0.33
CDC42-203ENST00000400259 NAP1L1P55209 391 aaKnown RBP17.13■□□□□ 0.33
CDC42-203ENST00000400259 XKR9Q5GH70 373 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 MEI1Q5TIA1 1274 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 ANO5Q75V66 913 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDC42-203ENST00000400259 OLIG1Q8TAK6 271 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 LMO3Q8TAP4 145 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 CDHR1Q96JP9 859 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 ZCCHC17Q9NP64 241 aaKnown RBP17.13■□□□□ 0.33
CDC42-203ENST00000400259 DNAJC12Q9UKB3 198 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 A0A0A6YYK5 440 aaPredicted RBP17.13■□□□□ 0.33
CDC42-203ENST00000400259 TMEM150BA6NC51 233 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 PMM2O15305 246 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 NCK2O43639 380 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 RGS20O76081 388 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 PLS1Q14651 629 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 SUPT20HL1Q3ZLR7 823 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 XXYLT1Q8NBI6 393 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 SPATA4Q8NEY3 305 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 SLC30A5Q8TAD4 765 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 SYT11Q9BT88 431 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 GPR88Q9GZN0 384 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 SUGCTQ9HAC7 445 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 HOXC10Q9NYD6 342 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 FZD1Q9UP38 647 aa17.13■□□□□ 0.33
CDC42-203ENST00000400259 GRID2IPA4D2P6 1211 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 SPDYE16A6NNV3 312 aaPredicted RBP17.12■□□□□ 0.33
CDC42-203ENST00000400259 EVI5O60447 810 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 STBD1O95210 358 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 HIRAP54198 1017 aaPredicted RBP17.12■□□□□ 0.33
CDC42-203ENST00000400259 C2orf54Q08AI8 447 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 SMC1AQ14683 1233 aaKnown RBP17.12■□□□□ 0.33
CDC42-203ENST00000400259 DRAP1Q14919 205 aaPredicted RBP17.12■□□□□ 0.33
CDC42-203ENST00000400259 IFI16Q16666 785 aaKnown RBP17.12■□□□□ 0.33
CDC42-203ENST00000400259 PLA2G4FQ68DD2 849 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 ATP6V0A1Q93050 837 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 VTI1AQ96AJ9 217 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 C17orf75Q9HAS0 396 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 A1CFQ9NQ94 594 aaKnown RBP17.12■□□□□ 0.33
CDC42-203ENST00000400259 HSPBP1Q9NZL4 362 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 USP20Q9Y2K6 914 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 DDX3XO00571 662 aaKnown RBP eCLIP17.12■□□□□ 0.333e-12■■■□□ 16
CDC42-203ENST00000400259 CES2O00748 559 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 CCDC172P0C7W6 258 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 PAFAH1B1P43034 410 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 VAMP7P51809 220 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 NPEPPSP55786 919 aa17.12■□□□□ 0.33
CDC42-203ENST00000400259 PEX3P56589 373 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms