RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 RC3H1Q5TC82 1133 aaKnown RBP16.24■□□□□ 0.19
UBXN2B-201ENST00000399598 DSTYKQ6XUX3 929 aa16.24■□□□□ 0.19
UBXN2B-201ENST00000399598 TRIM59Q8IWR1 403 aa16.24■□□□□ 0.19
UBXN2B-201ENST00000399598 MARCH10Q8NA82 808 aaPredicted RBP16.24■□□□□ 0.19
UBXN2B-201ENST00000399598 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.24■□□□□ 0.19
UBXN2B-201ENST00000399598 ORC6Q9Y5N6 252 aa16.24■□□□□ 0.19
UBXN2B-201ENST00000399598 PLA2R1Q13018 1463 aa16.24■□□□□ 0.19
UBXN2B-201ENST00000399598 PPP2R2AP63151 447 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 ZNF699Q32M78 642 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 STAG2Q8N3U4 1231 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 TAF1DQ9H5J8 278 aaPredicted RBP16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 KLHL8Q9P2G9 620 aaPredicted RBP16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 C21orf2O43822 256 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 CSPG5O95196 566 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 RCSD1Q6JBY9 416 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 CDC26Q8NHZ8 85 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 NCAPGQ9BPX3 1015 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 ABCF3Q9NUQ8 709 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 PRDM15P57071 1507 aaPredicted RBP16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 F5H6K3 240 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 KLRC3Q07444 240 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 MKRN3Q13064 507 aaKnown RBP16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 LRRC14Q15048 493 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 TSGA10IPQ3SY00 556 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 TTC13Q8NBP0 860 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 SPATA4Q8NEY3 305 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 SAAL1Q96ER3 474 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 TTC1Q99614 292 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 KIAA1586Q9HCI6 787 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 FGFR1OP2Q9NVK5 253 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 BNIP3LO60238 219 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 VSNL1P62760 191 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 TAF1BQ53T94 588 aaPredicted RBP16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 PARD3BQ8TEW8 1205 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 INTS2Q9H0H0 1204 aaKnown RBP16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 KIF9Q9HAQ2 790 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 TBC1D22BQ9NU19 505 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 RFX7Q2KHR2 1363 aa16.23■□□□□ 0.19
UBXN2B-201ENST00000399598 PPM1NQ8N819 430 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 HPS3Q969F9 1004 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 ALDH8A1Q9H2A2 487 aaPredicted RBP16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 LIMA1Q9UHB6 759 aaKnown RBP16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 ZNF335Q9H4Z2 1342 aaPredicted RBP16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 A0A1W2PQC6 194 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 ANKRD40Q6AI12 368 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 KLC3Q6P597 504 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 UPF3AQ9H1J1 476 aaKnown RBP16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 VPS11Q9H270 941 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 NOC2LQ9Y3T9 749 aaKnown RBP16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 CHUKO15111 745 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 COG1Q8WTW3 980 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 CHP1Q99653 195 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 ISCA1Q9BUE6 129 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 CDHR2Q9BYE9 1310 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 CPDO75976 1380 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 SOX5P35711 763 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 INPP1P49441 399 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 EXOSC10Q01780 885 aaKnown RBP16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 KRT27Q7Z3Y8 459 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 ZC3H18Q86VM9 953 aaKnown RBP16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 ADGRF4Q8IZF3 695 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 AMACRQ9UHK6 382 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 NARFQ9UHQ1 456 aa16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 FBXO2Q9UK22 296 aaPredicted RBP16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 APOBEC2Q9Y235 224 aaKnown RBP16.22■□□□□ 0.19
UBXN2B-201ENST00000399598 FAM205CA6NFA0 338 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 CHGBP05060 677 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 CALB1P05937 261 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 KITP10721 976 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 KRT10P13645 584 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 CHRNA3P32297 505 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 QARSP47897 775 aaKnown RBP16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 ZNF568Q3ZCX4 644 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 NAALADL2Q58DX5 795 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 MASTLQ96GX5 879 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 ZNF668Q96K58 619 aaPredicted RBP16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 LRFN2Q9ULH4 789 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 SETSIPP0DME0 302 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 CCDC137Q6PK04 289 aaKnown RBP16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 SMYD3Q9H7B4 428 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 FBXL5Q9UKA1 691 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 CAPN11Q9UMQ6 739 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 UBE4BO95155 1302 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 CTIFO43310 598 aaKnown RBP16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 FOXO4P98177 505 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 KRT76Q01546 638 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 GPS1Q13098 491 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 STXBP2Q15833 593 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 TMEM259Q4ZIN3 620 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 E4F1Q66K89 784 aaPredicted RBP16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 SRBD1Q8N5C6 995 aaKnown RBP16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 MROH7-TTC4A0A0A0MT08 1334 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 NCAPD2Q15021 1401 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 SPAG7O75391 227 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 DNAJC8O75937 253 aaPredicted RBP16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 P4HBP07237 508 aaKnown RBP16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 ATXN8OSP0DMR3 200 aa16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 MDM2Q00987 491 aaPredicted RBP16.21■□□□□ 0.19
UBXN2B-201ENST00000399598 CAV1Q03135 178 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms