RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 POLR1AO95602 1720 aaPredicted RBP8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 LRRC53A6NM62 1247 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 MEIS1O00470 390 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 SNX2O60749 519 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 LARGE1O95461 756 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 P4HBP07237 508 aaKnown RBP8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 MCAMP43121 646 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 VAMP7P51809 220 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 LRRC7Q96NW7 1537 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 GOLGA8JA6NMD2 632 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 USP17L8P0C7I0 530 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 ROR1Q01973 937 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 OCA2Q04671 838 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 PDIA5Q14554 519 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 STAT4Q14765 748 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 TERF2Q15554 542 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 ZNF699Q32M78 642 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 BBS9Q3SYG4 887 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 C4orf22Q6V702 233 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 DSTYKQ6XUX3 929 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 RHOT1Q8IXI2 618 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 ATP11CQ8NB49 1132 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 ACAP3Q96P50 834 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 PARVAQ9NVD7 372 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 SUCLA2Q9P2R7 463 aaPredicted RBP8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 STAP1Q9ULZ2 295 aa8.92□□□□□ -0.98
SPTLC3-201ENST00000399002 GYG2O15488 501 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 HAUS5O94927 633 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 SLC16A2P36021 539 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 ATP2C1P98194 919 aaPredicted RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 CTTNQ14247 550 aaKnown RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 POLR3CQ9BUI4 534 aaPredicted RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 ASAP1Q9ULH1 1129 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 ZHX2Q9Y6X8 837 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 USP32Q8NFA0 1604 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 GDF11O95390 407 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 PLEKHA8P1O95397 391 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 CD2BP2O95400 341 aaKnown RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 TMPRSS15P98073 1019 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 TBCCQ15814 346 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 PTPROQ16827 1216 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 KIF19Q2TAC6 998 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 LRRC23Q53EV4 343 aaPredicted RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 APOBEC3FQ8IUX4 373 aaKnown RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 GPD1LQ8N335 351 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 ELMOD1Q8N336 334 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 URGCPQ8TCY9 931 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 NUP85Q9BW27 656 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 APOL6Q9BWW8 343 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 ANAPC7Q9UJX3 599 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 KIAA1210Q9ULL0 1709 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 A0A1W2PQJ5 194 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 RASA4BC9J798 803 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 H3BRJ5 948 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 RASA4O43374 803 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 RPS6KA4O75676 772 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 ZRANB2O95218 330 aaKnown RBP eCLIP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 CHGBP05060 677 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 TSPY1Q01534 308 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 SIRT2Q8IXJ6 389 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 RFFLQ8WZ73 363 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 DDX50Q9BQ39 737 aaKnown RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 TSSK1BQ9BXA7 367 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 GOLPH3LQ9H4A5 285 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 SEC31BQ9NQW1 1179 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 ZNF302Q9NR11 478 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 NSMCE4AQ9NXX6 385 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 SMG5Q9UPR3 1016 aaKnown RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 MORC2Q9Y6X9 1032 aaPredicted RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 PDS5AQ29RF7 1337 aaKnown RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 COL15A1P39059 1388 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 GOLGA8TH3BQL2 631 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 PYGLP06737 847 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 EPHB1P54762 984 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 CIAPIN1Q6FI81 312 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 PADI6Q6TGC4 694 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 MIGA2Q7L4E1 593 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 NLRP14Q86W24 1093 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 TBC1D10CQ8IV04 446 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 DTNBP1Q96EV8 351 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 IFT43Q96FT9 208 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 MRPL4Q9BYD3 311 aaKnown RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 ZWILCHQ9H900 591 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 ARHGAP10A1A4S6 786 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 RTN2O75298 545 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 AGTP01019 485 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 HSPA9P38646 679 aaKnown RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 IL1RL1Q01638 556 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 LRRC31Q6UY01 552 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 SFR1Q86XK3 245 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 APLFQ8IW19 511 aaPredicted RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 RYBPQ8N488 228 aaPredicted RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 MRPL46Q9H2W6 279 aaKnown RBP8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 HPCAL4Q9UM19 191 aa8.91□□□□□ -0.98
SPTLC3-201ENST00000399002 KDM6AO15550 1401 aaPredicted RBP8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 CXCR5P32302 372 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 CACNB1Q02641 598 aaPredicted RBP8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 NUGGCQ68CJ6 796 aa8.9□□□□□ -0.98
SPTLC3-201ENST00000399002 CCDC24Q8N4L8 307 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms