RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TOP1MTQ969P6 601 aa28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 FAM161BQ96MY7 647 aa28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 CLIC6Q96NY7 704 aa28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 RAD9AQ99638 391 aa28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 RNF216Q9NWF9 866 aaPredicted RBP28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 CCDC39Q9UFE4 941 aa28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 CFAP45Q9UL16 551 aa28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 LRFN2Q9ULH4 789 aa28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 SPTLC2O15270 562 aa28.14■■■□□ 2.1
TSPAN4-207ENST00000397411 SPECC1Q5M775 1068 aa28.14■■■□□ 2.1
TSPAN4-207ENST00000397411 ATL3Q6DD88 541 aa28.14■■■□□ 2.1
TSPAN4-207ENST00000397411 SRGAP1Q7Z6B7 1085 aa28.14■■■□□ 2.1
TSPAN4-207ENST00000397411 LINC00301Q8NCQ3 95 aa28.14■■■□□ 2.1
TSPAN4-207ENST00000397411 ASAP3Q8TDY4 903 aa28.14■■■□□ 2.1
TSPAN4-207ENST00000397411 TSPYL2Q9H2G4 693 aaPredicted RBP28.14■■■□□ 2.1
TSPAN4-207ENST00000397411 GPRC5CQ9NQ84 441 aa28.14■■■□□ 2.1
TSPAN4-207ENST00000397411 C1orf112Q9NSG2 853 aa28.14■■■□□ 2.1
TSPAN4-207ENST00000397411 YBX2Q9Y2T7 364 aaKnown RBP28.14■■■□□ 2.1
TSPAN4-207ENST00000397411 INSL6Q9Y581 213 aa28.14■■■□□ 2.1
TSPAN4-207ENST00000397411 STAG3L1P0CL83 205 aa28.13■■■□□ 2.09
TSPAN4-207ENST00000397411 YME1L1Q96TA2 773 aa28.13■■■□□ 2.09
TSPAN4-207ENST00000397411 PTPRSQ13332 1948 aa28.13■■■□□ 2.09
TSPAN4-207ENST00000397411 TMEM265A0A087WTH1 108 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 YEATS4O95619 227 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 BRD1O95696 1058 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 GLRA2P23416 452 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 NCBP1Q09161 790 aaKnown RBP28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 KARSQ15046 597 aaKnown RBP28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 PPP2R2DQ66LE6 453 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 Q7L0L9 218 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 KCNK18Q7Z418 384 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 EPSTI1Q96J88 318 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 IFT74Q96LB3 600 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 CCSER1Q9C0I3 900 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 SEMA6BQ9H3T3 888 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 ZNF576Q9H609 170 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 IFT122Q9HBG6 1241 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 RGS18Q9NS28 235 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 PCDHB7Q9Y5E2 793 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 ATP6V1DQ9Y5K8 247 aa28.12■■■□□ 2.09
TSPAN4-207ENST00000397411 LRRIQ4A6NIV6 560 aa28.11■■■□□ 2.09
TSPAN4-207ENST00000397411 MGEA5O60502 916 aa28.11■■■□□ 2.09
TSPAN4-207ENST00000397411 CA3P07451 260 aa28.11■■■□□ 2.09
TSPAN4-207ENST00000397411 PLA2G4BP0C869 781 aa28.11■■■□□ 2.09
TSPAN4-207ENST00000397411 NCLP19338 710 aaKnown RBP28.11■■■□□ 2.09
TSPAN4-207ENST00000397411 TMEM119Q4V9L6 283 aa28.11■■■□□ 2.09
TSPAN4-207ENST00000397411 SLC24A5Q71RS6 500 aa28.11■■■□□ 2.09
TSPAN4-207ENST00000397411 LINC01599Q8WXQ3 324 aa28.11■■■□□ 2.09
TSPAN4-207ENST00000397411 MORC2Q9Y6X9 1032 aaPredicted RBP28.11■■■□□ 2.09
TSPAN4-207ENST00000397411 INO80B-WBP1J3KQ70 363 aa28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 PPP6R2O75170 966 aa28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 SARSP49591 514 aaKnown RBP28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 DNM1Q05193 864 aaKnown RBP28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 POU5F1BQ06416 359 aa28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 CAPSQ13938 189 aa28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 DHX8Q14562 1220 aaKnown RBP28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 PPP2R5AQ15172 486 aa28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 NPAS4Q8IUM7 802 aa28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 SYMPKQ92797 1274 aaKnown RBP28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 KIFAP3Q92845 792 aa28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 POLD4Q9HCU8 107 aa28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 CHST12Q9NRB3 414 aa28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 DACT1Q9NYF0 836 aa28.1■■■□□ 2.09
TSPAN4-207ENST00000397411 ERLIN2O94905 339 aa28.09■■■□□ 2.09
TSPAN4-207ENST00000397411 PLCG1P19174 1290 aa28.09■■■□□ 2.09
TSPAN4-207ENST00000397411 PTENP60484 403 aa28.09■■■□□ 2.09
TSPAN4-207ENST00000397411 DSC3Q14574 896 aa28.09■■■□□ 2.09
TSPAN4-207ENST00000397411 RINT1Q6NUQ1 792 aa28.09■■■□□ 2.09
TSPAN4-207ENST00000397411 USP49Q70CQ1 688 aa28.09■■■□□ 2.09
TSPAN4-207ENST00000397411 ZBTB8OSQ8IWT0 167 aa28.09■■■□□ 2.09
TSPAN4-207ENST00000397411 SYT2Q8N9I0 419 aaPredicted RBP28.09■■■□□ 2.09
TSPAN4-207ENST00000397411 KCNG4Q8TDN1 519 aa28.09■■■□□ 2.09
TSPAN4-207ENST00000397411 PIN4Q9Y237 131 aaKnown RBP28.09■■■□□ 2.09
TSPAN4-207ENST00000397411 TTC3P53804 2025 aa28.09■■■□□ 2.09
TSPAN4-207ENST00000397411 ANP32AP39687 249 aaKnown RBP28.08■■■□□ 2.09
TSPAN4-207ENST00000397411 RRAGBQ5VZM2 374 aa28.08■■■□□ 2.09
TSPAN4-207ENST00000397411 TWF2Q6IBS0 349 aaKnown RBP28.08■■■□□ 2.09
TSPAN4-207ENST00000397411 DEPTORQ8TB45 409 aa28.08■■■□□ 2.09
TSPAN4-207ENST00000397411 TTYH1Q9H313 450 aaPredicted RBP28.08■■■□□ 2.09
TSPAN4-207ENST00000397411 ZDHHC9Q9Y397 364 aa28.08■■■□□ 2.09
TSPAN4-207ENST00000397411 ME1P48163 572 aa28.07■■■□□ 2.08
TSPAN4-207ENST00000397411 NUCB2P80303 420 aa28.07■■■□□ 2.08
TSPAN4-207ENST00000397411 C1orf186Q6ZWK4 172 aa28.07■■■□□ 2.08
TSPAN4-207ENST00000397411 DRC1Q96MC2 740 aa28.07■■■□□ 2.08
TSPAN4-207ENST00000397411 RUSC1Q9BVN2 902 aa28.07■■■□□ 2.08
TSPAN4-207ENST00000397411 TIPINQ9BVW5 301 aa28.07■■■□□ 2.08
TSPAN4-207ENST00000397411 MINDY3Q9H8M7 445 aa28.07■■■□□ 2.08
TSPAN4-207ENST00000397411 C9IYK1 514 aa28.06■■■□□ 2.08
TSPAN4-207ENST00000397411 CUTAO60888 179 aa28.06■■■□□ 2.08
TSPAN4-207ENST00000397411 HIP1RO75146 1068 aa28.06■■■□□ 2.08
TSPAN4-207ENST00000397411 KRT18P05783 430 aaKnown RBP28.06■■■□□ 2.08
TSPAN4-207ENST00000397411 HTRA4P83105 476 aaPredicted RBP28.06■■■□□ 2.08
TSPAN4-207ENST00000397411 RAD51AP2Q09MP3 1159 aa28.06■■■□□ 2.08
TSPAN4-207ENST00000397411 RNF169Q8NCN4 708 aa28.06■■■□□ 2.08
TSPAN4-207ENST00000397411 RAD54LQ92698 747 aa28.06■■■□□ 2.08
TSPAN4-207ENST00000397411 PANK2Q9BZ23 570 aa28.06■■■□□ 2.08
TSPAN4-207ENST00000397411 C2orf40Q9H1Z8 148 aa28.06■■■□□ 2.08
TSPAN4-207ENST00000397411 LCHNA4D1U4 455 aa28.05■■■□□ 2.08
TSPAN4-207ENST00000397411 NAMPTP43490 491 aa28.05■■■□□ 2.08
TSPAN4-207ENST00000397411 SLC12A3P55017 1021 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms