RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TRAPPC12Q8WVT3 735 aa18.71■□□□□ 0.59
TSPAN4-205ENST00000397406 SLC7A3Q8WY07 619 aa18.71■□□□□ 0.59
TSPAN4-205ENST00000397406 KIFAP3Q92845 792 aa18.71■□□□□ 0.59
TSPAN4-205ENST00000397406 MED15Q96RN5 788 aa18.71■□□□□ 0.59
TSPAN4-205ENST00000397406 PRKAG2Q9UGJ0 569 aa18.71■□□□□ 0.59
TSPAN4-205ENST00000397406 MAPK8IP1Q9UQF2 711 aa18.71■□□□□ 0.59
TSPAN4-205ENST00000397406 GOLGA6L3A6NEY3 463 aa18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 C22orf31O95567 290 aa18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 PLS3P13797 630 aa18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 ERCC5P28715 1186 aaPredicted RBP18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 CASP5P51878 434 aa18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 KIAA0753Q2KHM9 967 aa18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 ODR4Q5SWX8 454 aa18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 EPM2AIP1Q7L775 607 aaPredicted RBP18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 DHX40Q8IX18 779 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 EXOC8Q8IYI6 725 aa18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 GUF1Q8N442 669 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 PCSK9Q8NBP7 692 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 KATNAL1Q9BW62 490 aa18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 LARSQ9P2J5 1176 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-205ENST00000397406 COL6A3P12111 3177 aa18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 ARVCFO00192 962 aa18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 GAS2O43903 313 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 ARL2P36404 184 aa18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 PPP1R2P41236 205 aa18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 STIM1Q13586 685 aa18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 LUZP1Q86V48 1076 aa18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 FAM178BQ8IXR5 827 aa18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 FAM126BQ8IXS8 530 aa18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 AOPEPQ8N6M6 819 aa18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 GLT1D1Q96MS3 346 aa18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 POLR3FQ9H1D9 316 aaPredicted RBP18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 MRPL44Q9H9J2 332 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 C17orf75Q9HAS0 396 aa18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 CTNND2Q9UQB3 1225 aa18.69■□□□□ 0.58
TSPAN4-205ENST00000397406 ZEB2O60315 1214 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 CD4P01730 458 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 MYBP10242 640 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 MAPTP10636 758 aaKnown RBP18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 NMT1P30419 496 aaKnown RBP18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 PPFIA1Q13136 1202 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 PAK1Q13153 545 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 MKRN4PQ13434 485 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 GRIK4Q16099 956 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 MARCH8Q5T0T0 291 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 KLHL10Q6JEL2 608 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 GPR153Q6NV75 609 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 SCFD1Q8WVM8 642 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 BSNDQ8WZ55 320 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 TMEM143Q96AN5 459 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 DHTKD1Q96HY7 919 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 JPH2Q9BR39 696 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 MTG1Q9BT17 334 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 STRA6Q9BX79 667 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 TMEM39AQ9NV64 488 aa18.68■□□□□ 0.58
TSPAN4-205ENST00000397406 A0A0U1RQG5 324 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 PSMA7O14818 248 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 IKBKBO14920 756 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 PPP1R37O75864 691 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 SMIM10L2AP0DMW4 78 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 SMIM10L2BP0DMW5 78 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 KLRC1P26715 233 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 NCKAP1LP55160 1127 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 PEX3P56589 373 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 IGBP1P78318 339 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 DRP2Q13474 957 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 NCAPHQ15003 741 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 BMT2Q1RMZ1 405 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 C16orf59Q7L2K0 433 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 ZNF720Q7Z2F6 126 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 MYOCDQ8IZQ8 938 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 LINC01465Q8N7H1 131 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 ENOX1Q8TC92 643 aaKnown RBP18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 ASAP3Q8TDY4 903 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 NELFBQ8WX92 580 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 ZBTB10Q96DT7 871 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 RWDD2AQ9UIY3 292 aa18.67■□□□□ 0.58
TSPAN4-205ENST00000397406 RRN3P2A6NIE6 340 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 EIF3DO15371 548 aaKnown RBP eCLIP18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 MAGEB2O15479 319 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 GCNT3O95395 438 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 GLRA2P23416 452 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 CCNE1P24864 410 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 HOXC8P31273 242 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 NPTX2P47972 431 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 MYL5Q02045 173 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 IER5Q5VY09 327 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 CENPPQ6IPU0 288 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 MTHFD1LQ6UB35 978 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 LRRC71Q8N4P6 559 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 DEFB123Q8N688 67 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 ZNF507Q8TCN5 953 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 LMBR1Q8WVP7 490 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 SPIRE2Q8WWL2 714 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 TCP11Q8WWU5 503 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 NTPCRQ9BSD7 190 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 ST6GALNAC4Q9H4F1 302 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 GRPEL1Q9HAV7 217 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 SETD4Q9NVD3 440 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 MTMR10Q9NXD2 777 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms