RNA–Protein interactions for RNA: ENST00000397023.5

PPARG-208, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 5

Gene PPARG, Length 2,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-208ENST00000397023 FAM133BQ5BKY9 247 aaKnown RBP10.41□□□□□ -0.74
PPARG-208ENST00000397023 SEL1L2Q5TEA6 688 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 USP17L2Q6R6M4 530 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 ZDHHC24Q6UX98 284 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 EPM2AIP1Q7L775 607 aaPredicted RBP10.41□□□□□ -0.74
PPARG-208ENST00000397023 SH3RF3Q8TEJ3 882 aaPredicted RBP10.41□□□□□ -0.74
PPARG-208ENST00000397023 RNF25Q96BH1 459 aaPredicted RBP10.41□□□□□ -0.74
PPARG-208ENST00000397023 SPDL1Q96EA4 605 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 RPS6KC1Q96S38 1066 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 TRIM31Q9BZY9 425 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 GOLPH3Q9H4A6 298 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 SIX2Q9NPC8 291 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 KIAA1024Q9UPX6 916 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 THRAP3Q9Y2W1 955 aaKnown RBP10.41□□□□□ -0.74
PPARG-208ENST00000397023 UBE4BO95155 1302 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 LOC102724428A0A0B4J2F2 783 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 TLDC2A0PJX2 215 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 SMNDC1O75940 238 aaKnown RBP eCLIP10.41□□□□□ -0.74
PPARG-208ENST00000397023 KRT13P13646 458 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 CCNB1P14635 433 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 GAP43P17677 238 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 VCAM1P19320 739 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 CTNNA2P26232 953 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 PDE6BP35913 854 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 MSH2P43246 934 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 ALDH5A1P51649 535 aaPredicted RBP10.41□□□□□ -0.74
PPARG-208ENST00000397023 SLC12A3P55017 1021 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 SIK1P57059 783 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 CYP1B1Q16678 543 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 DCAF17Q5H9S7 520 aaPredicted RBP10.41□□□□□ -0.74
PPARG-208ENST00000397023 RNF43Q68DV7 783 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 SPATA21Q7Z572 469 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 FBXO25Q8TCJ0 367 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 HAS1Q92839 578 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 PLVAPQ9BX97 442 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 DHX36Q9H2U1 1008 aaKnown RBP10.41□□□□□ -0.74
PPARG-208ENST00000397023 ABCF3Q9NUQ8 709 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 SLC5A4Q9NY91 659 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 GRHL1Q9NZI5 618 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 RPL26L1Q9UNX3 145 aaKnown RBP10.41□□□□□ -0.74
PPARG-208ENST00000397023 MTMR7Q9Y216 660 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 ARFGEF1Q9Y6D6 1849 aa10.41□□□□□ -0.74
PPARG-208ENST00000397023 IGF2BP3O00425 579 aaKnown RBP eCLIP10.4□□□□□ -0.74
PPARG-208ENST00000397023 TBX3O15119 743 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 EIF3DO15371 548 aaKnown RBP eCLIP10.4□□□□□ -0.74
PPARG-208ENST00000397023 EVI5O60447 810 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 TTLL1O95922 423 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 NR3C1P04150 777 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 SNHG28P0DPA3 235 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 ALAS1P13196 640 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 IBSPP21815 317 aaPredicted RBP10.4□□□□□ -0.74
PPARG-208ENST00000397023 MAN1A1P33908 653 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 PTGIRP43119 386 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 SARNPP82979 210 aaKnown RBP10.4□□□□□ -0.74
PPARG-208ENST00000397023 CALCOCO2Q13137 446 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 AUHQ13825 339 aaKnown RBP10.4□□□□□ -0.74
PPARG-208ENST00000397023 BLMHQ13867 455 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 ECM1Q16610 540 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 PARP6Q2NL67 630 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 ERFEQ4G0M1 354 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 TCERG1LQ5VWI1 586 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 CDCA2Q69YH5 1023 aaPredicted RBP10.4□□□□□ -0.74
PPARG-208ENST00000397023 CEP128Q6ZU80 1094 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 SYDE1Q6ZW31 735 aaPredicted RBP10.4□□□□□ -0.74
PPARG-208ENST00000397023 SLF2Q8IX21 1173 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 MARCH10Q8NA82 808 aaPredicted RBP10.4□□□□□ -0.74
PPARG-208ENST00000397023 SH3TC2Q8TF17 1288 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 ART4Q93070 314 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 SLC35C1Q96A29 364 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 FAM212AQ96EL1 285 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 THOC1Q96FV9 657 aaKnown RBP10.4□□□□□ -0.74
PPARG-208ENST00000397023 TBC1D7Q9P0N9 293 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 KLHL14Q9P2G3 628 aa10.4□□□□□ -0.74
PPARG-208ENST00000397023 COL5A3P25940 1745 aaPredicted RBP10.4□□□□□ -0.75
PPARG-208ENST00000397023 CYP3A7-CYP3A51PA0A087WV96 503 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 E9PMD0 336 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 TCEA3O75764 348 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 CYP3A7P24462 503 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 CAV1Q03135 178 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 DIXDC1Q155Q3 683 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 DDB1Q16531 1140 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 DCAF12L1Q5VU92 463 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 ARHGEF18Q6ZSZ5 1173 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 BARGINQ6ZT62 677 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 ASRGL1Q7L266 308 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 C12orf50Q8NA57 414 aaPredicted RBP10.4□□□□□ -0.75
PPARG-208ENST00000397023 LNX1Q8TBB1 728 aaPredicted RBP10.4□□□□□ -0.75
PPARG-208ENST00000397023 TGFBRAP1Q8WUH2 860 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 SLCO2A1Q92959 643 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 WNT8AQ9H1J5 351 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 VAT1LQ9HCJ6 419 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 WHRNQ9P202 907 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 PPP1R9AQ9ULJ8 1098 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 DNM3Q9UQ16 869 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 SNX24Q9Y343 169 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 ACTL7BQ9Y614 415 aa10.4□□□□□ -0.75
PPARG-208ENST00000397023 DIAPH2O60879 1101 aa10.39□□□□□ -0.75
PPARG-208ENST00000397023 HIP1RO75146 1068 aa10.39□□□□□ -0.75
PPARG-208ENST00000397023 TNFAIP3P21580 790 aa10.39□□□□□ -0.75
PPARG-208ENST00000397023 PSMC2P35998 433 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms