RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 TBC1D8BQ0IIM8 1120 aa16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 PPFIA1Q13136 1202 aa16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 CXCL17Q6UXB2 119 aa16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 ZNF397Q8NF99 534 aaPredicted RBP16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 DRC1Q96MC2 740 aa16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 JPH2Q9BR39 696 aaPredicted RBP16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 RNF208Q9H0X6 261 aa16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 EXOC1Q9NV70 894 aa16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 NRCAMQ92823 1304 aa16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 MOXD2PA6NHM9 499 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 SMIM10L2AP0DMW4 78 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 SMIM10L2BP0DMW5 78 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 GAP43P17677 238 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 GRIK4Q16099 956 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 ARRDC4Q8NCT1 418 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 GTPBP4Q9BZE4 634 aaKnown RBP16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 PARVGQ9HBI0 331 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 FANCLQ9NW38 375 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 COL4A3BPQ9Y5P4 624 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 RRN3P2A6NIE6 340 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 CABYRO75952 493 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 FAM13AO94988 1023 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 C22orf31O95567 290 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 HOXC8P31273 242 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 RTP1P59025 263 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 PSMD2Q13200 908 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 ZNF658Q5TYW1 1059 aaPredicted RBP16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 TRAPPC12Q8WVT3 735 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 KIFAP3Q92845 792 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 DEFB118Q96PH6 123 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 SEL1LQ9UBV2 794 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 PRDM4Q9UKN5 801 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 OGDHLQ9ULD0 1010 aa16.34■□□□□ 0.21
TM9SF1-202ENST00000396854 SIP14410 1827 aa16.33■□□□□ 0.21
TM9SF1-202ENST00000396854 MAGEB2O15479 319 aa16.33■□□□□ 0.21
TM9SF1-202ENST00000396854 ERCC5P28715 1186 aaPredicted RBP16.33■□□□□ 0.21
TM9SF1-202ENST00000396854 ACLYP53396 1101 aa16.33■□□□□ 0.21
TM9SF1-202ENST00000396854 C17orf75Q9HAS0 396 aa16.33■□□□□ 0.21
TM9SF1-202ENST00000396854 OLFML3Q9NRN5 406 aa16.33■□□□□ 0.21
TM9SF1-202ENST00000396854 PCDHA2Q9Y5H9 948 aa16.33■□□□□ 0.21
TM9SF1-202ENST00000396854 PHLPP2Q6ZVD8 1323 aa16.33■□□□□ 0.2
TM9SF1-202ENST00000396854 BRCA2P51587 3418 aa16.33■□□□□ 0.2
TM9SF1-202ENST00000396854 ADAM17P78536 824 aa16.33■□□□□ 0.2
TM9SF1-202ENST00000396854 HERC4Q5GLZ8 1057 aaPredicted RBP16.33■□□□□ 0.2
TM9SF1-202ENST00000396854 MARCH8Q5T0T0 291 aa16.33■□□□□ 0.2
TM9SF1-202ENST00000396854 FAM102BQ5T8I3 360 aa16.33■□□□□ 0.2
TM9SF1-202ENST00000396854 SYT10Q6XYQ8 523 aa16.33■□□□□ 0.2
TM9SF1-202ENST00000396854 MAEAQ7L5Y9 396 aa16.33■□□□□ 0.2
TM9SF1-202ENST00000396854 LINC01465Q8N7H1 131 aa16.33■□□□□ 0.2
TM9SF1-202ENST00000396854 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
TM9SF1-202ENST00000396854 GPRC5CQ9NQ84 441 aa16.33■□□□□ 0.2
TM9SF1-202ENST00000396854 INTS13Q9NVM9 706 aa16.33■□□□□ 0.2
TM9SF1-202ENST00000396854 DNM1LO00429 736 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 MYCNP04198 464 aaPredicted RBP16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 PLS3P13797 630 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 ZNF18P17022 549 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 ARL2P36404 184 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 ETF1P62495 437 aaKnown RBP16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 IGBP1P78318 339 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 COBLL1Q53SF7 1204 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 FAM26FQ5R3K3 315 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 MTHFD1LQ6UB35 978 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 SESTD1Q86VW0 696 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 SFR1Q86XK3 245 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 KIAA0895Q8NCT3 520 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 ENOX1Q8TC92 643 aaKnown RBP16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 TCP11Q8WWU5 503 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 CRISPLD2Q9H0B8 497 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 POLD4Q9HCU8 107 aa16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 LARSQ9P2J5 1176 aaKnown RBP16.32■□□□□ 0.2
TM9SF1-202ENST00000396854 MBLAC1A4D2B0 266 aaPredicted RBP16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 SFI1A8K8P3 1242 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 MYCP01106 439 aaPredicted RBP16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 KLRC1P26715 233 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 STK4Q13043 487 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 TBX2Q13207 712 aaPredicted RBP16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 IER5Q5VY09 327 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 C7orf31Q8N865 590 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 RETREG2Q8NC44 543 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 FIZ1Q96SL8 496 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 POLR3FQ9H1D9 316 aaPredicted RBP16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 ZHX3Q9H4I2 956 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 SETD4Q9NVD3 440 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 HDAC6Q9UBN7 1215 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 PHF24Q9UPV7 400 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 GJB1P08034 283 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 MAPTP10636 758 aaKnown RBP16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 SOX10P56693 466 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 MKRN4PQ13434 485 aaPredicted RBP16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 ELF2Q15723 593 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 NBPF20Q3BBV1 942 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 NFRKBQ6P4R8 1299 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 TMEM139Q8IV31 216 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 MYCT1Q8N699 235 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 HPS3Q969F9 1004 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 TMEM143Q96AN5 459 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 GTF2IRD1Q9UHL9 959 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 GDAQ9Y2T3 454 aa16.31■□□□□ 0.2
TM9SF1-202ENST00000396854 C17orf102A2RUQ5 167 aa16.3■□□□□ 0.2
TM9SF1-202ENST00000396854 KBTBD13C9JR72 458 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms