RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 SLITRK6Q9H5Y7 841 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 ZNF804BA4D1E1 1349 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 NTSR2O95665 410 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 GHRP10912 638 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 VPS41P49754 854 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 CYP4A11Q02928 519 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 RNASELQ05823 741 aaKnown RBP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 KCNA1Q09470 495 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 PSMD2Q13200 908 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 SEMA3FQ13275 785 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 CRY2Q49AN0 593 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 TBC1D9BQ66K14 1250 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 C3orf20Q8ND61 904 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 ARMC2Q8NEN0 867 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 ATP8B4Q8TF62 1192 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 ATXN2LQ8WWM7 1075 aaKnown RBP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 CTNNBL1Q8WYA6 563 aaPredicted RBP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 TLCD1Q96CP7 247 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 HOOK2Q96ED9 719 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 CALR3Q96L12 384 aaKnown RBP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 ZNF570Q96NI8 536 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 NYXQ9GZU5 481 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 NSRP1Q9H0G5 558 aaKnown RBP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 PABPC3Q9H361 631 aaKnown RBP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 ARHGEF10LQ9HCE6 1279 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 TIAM2Q8IVF5 1701 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 SRRM3A6NNA2 597 aaPredicted RBP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 RTN2O75298 545 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 SERPINB2P05120 415 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 LDHBP07195 334 aaKnown RBP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 PDHA1P08559 390 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 RASA1P20936 1047 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 EIF3BP55884 814 aaKnown RBP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 TRIP13Q15645 432 aaPredicted RBP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 ZCWPW2Q504Y3 356 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 KIAA1755Q5JYT7 1200 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 FAM47EQ6ZV65 393 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 JAMLQ86YT9 394 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 CCDC105Q8IYK2 499 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 ARHGEF26Q96DR7 871 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 POP1Q99575 1024 aaKnown RBP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 LRRC27Q9C0I9 530 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 A0A1B0GUL6 1792 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 IGSF9BQ9UPX0 1349 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 H0Y3Z8 333 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 MPHOSPH10O00566 681 aaKnown RBP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 GNA14O95837 355 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 PAEPP09466 180 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 NCALDP61601 193 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 SNX1Q13596 522 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 PLS1Q14651 629 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 TAF11Q15544 211 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 ZNF746Q6NUN9 644 aaPredicted RBP10.63□□□□□ -0.71
TRIM39-203ENST00000396547 CEP63Q96MT8 703 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 ADAM33Q9BZ11 813 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 ADAM7Q9H2U9 754 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 TAS2R14Q9NYV8 317 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 ANKIB1Q9P2G1 1089 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 CTNNAL1Q9UBT7 734 aa10.63□□□□□ -0.71
TRIM39-203ENST00000396547 USP17L15C9J2P7 530 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 USP17L13C9JLJ4 530 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 USP17L11C9JVI0 530 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 USP17L18D6R9N7 530 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 USP17L22D6RA61 530 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 USP17L17D6RBQ6 530 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 USP17L19D6RCP7 530 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 USP17L20D6RJB6 530 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 PPFIA2O75334 1257 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 HOXA10P31260 410 aaPredicted RBP10.62□□□□□ -0.71
TRIM39-203ENST00000396547 STAT1P42224 750 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 MARCKSL1P49006 195 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 CDK8P49336 464 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 PSMC6P62333 389 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 USP17L24Q0WX57 530 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 SBK1Q52WX2 424 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 THEMIS2Q5TEJ8 643 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 DCAF12L1Q5VU92 463 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 USP17L6PQ6QN14 398 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 SLC30A10Q6XR72 485 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 SFR1Q86XK3 245 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 SYCE1Q8N0S2 351 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 MRRFQ96E11 262 aaKnown RBP10.62□□□□□ -0.71
TRIM39-203ENST00000396547 DDX23Q9BUQ8 820 aaKnown RBP10.62□□□□□ -0.71
TRIM39-203ENST00000396547 CTTNBP2NLQ9P2B4 639 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 SUCLA2Q9P2R7 463 aaPredicted RBP10.62□□□□□ -0.71
TRIM39-203ENST00000396547 ABCB11O95342 1321 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 RSPH10B2B2RC85 870 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 AKAP3O75969 853 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 GCNT3O95395 438 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 RSPH10BP0C881 870 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 RARAP10276 462 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 TNFAIP3P21580 790 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 RPL21P46778 160 aaKnown RBP10.62□□□□□ -0.71
TRIM39-203ENST00000396547 FXR2P51116 673 aaKnown RBP eCLIP10.62□□□□□ -0.71
TRIM39-203ENST00000396547 PICALMQ13492 652 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 MESDQ14696 234 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 GNPTABQ3T906 1256 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 TTBK2Q6IQ55 1244 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 PRR5LQ6MZQ0 368 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms