RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 CEP350Q5VT06 3117 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 A0A1W2PQJ5 194 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 AFPP02771 609 aaKnown RBP10.09□□□□□ -0.79
NDE1-201ENST00000396354 NR3C1P04150 777 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 HSD17B3P37058 310 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 MMP14P50281 582 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 E2F5Q15329 346 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 BTNL9Q6UXG8 535 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 TRIM59Q8IWR1 403 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 BANK1Q8NDB2 785 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 THOC1Q96FV9 657 aaKnown RBP10.09□□□□□ -0.79
NDE1-201ENST00000396354 FHDC1Q9C0D6 1143 aaPredicted RBP10.09□□□□□ -0.79
NDE1-201ENST00000396354 CD248Q9HCU0 757 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 NAGPAQ9UK23 515 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 VIL1P09327 827 aaKnown RBP10.09□□□□□ -0.79
NDE1-201ENST00000396354 PON1P27169 355 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 SREBF1P36956 1147 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 DALRD3Q5D0E6 543 aaKnown RBP10.09□□□□□ -0.79
NDE1-201ENST00000396354 ZFYVE27Q5T4F4 411 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 USP38Q8NB14 1042 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 CCDC127Q96BQ5 260 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 TSPYL2Q9H2G4 693 aaPredicted RBP10.09□□□□□ -0.79
NDE1-201ENST00000396354 CD2APQ9Y5K6 639 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 EIF4E1BA6NMX2 242 aaKnown RBP10.09□□□□□ -0.79
NDE1-201ENST00000396354 KIF4AO95239 1232 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 H2AFZP0C0S5 128 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 KCNJ1P48048 391 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 SNX1Q13596 522 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 EPC2Q52LR7 807 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 DAB2IPQ5VWQ8 1189 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 H2AFVQ71UI9 128 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 CPLX4Q7Z7G2 160 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 KIRREL3Q8IZU9 778 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 CPXCR1Q8N123 301 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 LARGE2Q8N3Y3 721 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 CCT8L2Q96SF2 557 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 KCTD10Q9H3F6 313 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 USP20Q9Y2K6 914 aa10.09□□□□□ -0.79
NDE1-201ENST00000396354 COL2A1P02458 1487 aaPredicted RBP10.08□□□□□ -0.8
NDE1-201ENST00000396354 EPB41P11171 864 aaKnown RBP10.08□□□□□ -0.8
NDE1-201ENST00000396354 MARCKSL1P49006 195 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 GALCP54803 685 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 MTM1Q13496 603 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 MESDQ14696 234 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 LRRC14Q15048 493 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 ICE2Q659A1 982 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 PPP1R9AQ9ULJ8 1098 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 PCDHB8Q9UN66 801 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 IGSF9BQ9UPX0 1349 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 BRCA1P38398 1863 aaKnown RBP10.08□□□□□ -0.8
NDE1-201ENST00000396354 ATAD5Q96QE3 1844 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 EVI5O60447 810 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 EXOC3O60645 756 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 GCFC2P16383 781 aaKnown RBP10.08□□□□□ -0.8
NDE1-201ENST00000396354 SSR1P43307 286 aaKnown RBP10.08□□□□□ -0.8
NDE1-201ENST00000396354 USP11P51784 963 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 SLC20A2Q08357 652 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 QPCTQ16769 361 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 KNOP1Q1ED39 458 aaKnown RBP10.08□□□□□ -0.8
NDE1-201ENST00000396354 ASTE1Q2TB18 679 aaPredicted RBP10.08□□□□□ -0.8
NDE1-201ENST00000396354 MEI1Q5TIA1 1274 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 CAPN12Q6ZSI9 719 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 EFCAB13Q8IY85 973 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 TAB3Q8N5C8 712 aaPredicted RBP10.08□□□□□ -0.8
NDE1-201ENST00000396354 ZSWIM2Q8NEG5 633 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 CCDC114Q96M63 670 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 PLCB1Q9NQ66 1216 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 CTTNBP2NLQ9P2B4 639 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 FZD1Q9UP38 647 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 RABGAP1Q9Y3P9 1069 aa10.08□□□□□ -0.8
NDE1-201ENST00000396354 FARP1Q9Y4F1 1045 aaPredicted RBP10.08□□□□□ -0.8
NDE1-201ENST00000396354 PGRMC1O00264 195 aaKnown RBP10.07□□□□□ -0.8
NDE1-201ENST00000396354 FLOT1O75955 427 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 FGFR4P22455 802 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 GIT2Q14161 759 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 Q4G0T1 1027 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 ODR4Q5SWX8 454 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 VPS36Q86VN1 386 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 FAM186BQ8IYM0 893 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 ZNF473Q8WTR7 871 aaKnown RBP10.07□□□□□ -0.8
NDE1-201ENST00000396354 SLC20A1Q8WUM9 679 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 CTNNBL1Q8WYA6 563 aaPredicted RBP10.07□□□□□ -0.8
NDE1-201ENST00000396354 DYDC2Q96IM9 177 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 INPP4AQ96PE3 977 aaPredicted RBP10.07□□□□□ -0.8
NDE1-201ENST00000396354 NT5C3AQ9H0P0 336 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 COL20A1Q9P218 1284 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 TMX2Q9Y320 296 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 A0A087WUV0 522 aaPredicted RBP10.07□□□□□ -0.8
NDE1-201ENST00000396354 PPP1R37O75864 691 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 GCLMP48507 274 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 PRELPP51888 382 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 CXCL9Q07325 125 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 DRAP1Q14919 205 aaPredicted RBP10.07□□□□□ -0.8
NDE1-201ENST00000396354 SPRED3Q2MJR0 410 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 FIGNQ5HY92 759 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 HP1BP3Q5SSJ5 553 aaPredicted RBP10.07□□□□□ -0.8
NDE1-201ENST00000396354 NLRP14Q86W24 1093 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 KAT5Q92993 513 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 TBC1D31Q96DN5 1066 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 ARHGEF26Q96DR7 871 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms