RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 RNF149Q8NC42 400 aa21.28■■□□□ 1
HOXA9-202ENST00000396345 HERVK_113Q902F9 699 aa21.28■■□□□ 1
HOXA9-202ENST00000396345 APBB2Q92870 758 aa21.28■■□□□ 1
HOXA9-202ENST00000396345 PADI3Q9ULW8 664 aa21.28■■□□□ 1
HOXA9-202ENST00000396345 HIP1RO75146 1068 aa21.27■■□□□ 1
HOXA9-202ENST00000396345 RAD51AP2Q09MP3 1159 aa21.27■■□□□ 1
HOXA9-202ENST00000396345 CAPSQ13938 189 aa21.27■■□□□ 1
HOXA9-202ENST00000396345 IKBKEQ14164 716 aa21.27■■□□□ 1
HOXA9-202ENST00000396345 ARSHQ5FYA8 562 aa21.27■■□□□ 1
HOXA9-202ENST00000396345 ODR4Q5SWX8 454 aa21.27■■□□□ 1
HOXA9-202ENST00000396345 TDHQ8IZJ6 230 aa21.27■■□□□ 1
HOXA9-202ENST00000396345 IQUBQ8NA54 791 aa21.27■■□□□ 1
HOXA9-202ENST00000396345 DHX58Q96C10 678 aa21.27■■□□□ 1
HOXA9-202ENST00000396345 RNPC3Q96LT9 517 aaKnown RBP21.27■■□□□ 1
HOXA9-202ENST00000396345 INO80BQ9C086 356 aaPredicted RBP21.27■■□□□ 1
HOXA9-202ENST00000396345 MTIF3Q9H2K0 278 aaKnown RBP21.27■■□□□ 1
HOXA9-202ENST00000396345 IFT122Q9HBG6 1241 aa21.27■■□□□ 1
HOXA9-202ENST00000396345 KCNH3Q9ULD8 1083 aa21.27■■□□□ 1
HOXA9-202ENST00000396345 NPHP3-ACAD11A0A0J9YXS1 232 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 A0A1B0GVL5 298 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 A0A1W2PQ27 194 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 A0A1W2PQ64 194 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 A0A1W2PQD8 194 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 ZBBXA8MT70 800 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 GPR182O15218 404 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 POLR2DO15514 142 aaKnown RBP21.26■□□□□ 0.99
HOXA9-202ENST00000396345 BAIAP3O94812 1187 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 KRT18P05783 430 aaKnown RBP21.26■□□□□ 0.99
HOXA9-202ENST00000396345 PHKA2P46019 1235 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 POU5F1BQ06416 359 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 NFX1Q12986 1120 aaKnown RBP21.26■□□□□ 0.99
HOXA9-202ENST00000396345 E2F4Q16254 413 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 FAM228AQ86W67 206 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 IFT74Q96LB3 600 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 DRC1Q96MC2 740 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 ERVK-5Q9HDB9 667 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 ST3GAL5Q9UNP4 418 aa21.26■□□□□ 0.99
HOXA9-202ENST00000396345 ABHD14A-ACY1A0A1B0GW23 586 aa21.25■□□□□ 0.99
HOXA9-202ENST00000396345 GOLGA6L4A6NEF3 574 aa21.25■□□□□ 0.99
HOXA9-202ENST00000396345 LRRIQ4A6NIV6 560 aa21.25■□□□□ 0.99
HOXA9-202ENST00000396345 EFCAB14O75071 495 aa21.25■□□□□ 0.99
HOXA9-202ENST00000396345 CSDE1O75534 798 aaKnown RBP21.25■□□□□ 0.99
HOXA9-202ENST00000396345 PFKFB1P16118 471 aa21.25■□□□□ 0.99
HOXA9-202ENST00000396345 PTENP60484 403 aa21.25■□□□□ 0.99
HOXA9-202ENST00000396345 PPP2R5AQ15172 486 aa21.25■□□□□ 0.99
HOXA9-202ENST00000396345 CSPP1Q1MSJ5 1256 aa21.25■□□□□ 0.99
HOXA9-202ENST00000396345 SRGAP1Q7Z6B7 1085 aa21.25■□□□□ 0.99
HOXA9-202ENST00000396345 DAW1Q8N136 415 aa21.25■□□□□ 0.99
HOXA9-202ENST00000396345 FSIP1Q8NA03 581 aa21.25■□□□□ 0.99
HOXA9-202ENST00000396345 BSNDQ8WZ55 320 aa21.25■□□□□ 0.99
HOXA9-202ENST00000396345 PYM1Q9BRP8 204 aaKnown RBP21.25■□□□□ 0.99
HOXA9-202ENST00000396345 CUEDC2Q9H467 287 aa21.25■□□□□ 0.99
HOXA9-202ENST00000396345 A0A1W2PPC1 479 aa21.24■□□□□ 0.99
HOXA9-202ENST00000396345 FGFR4P22455 802 aa21.24■□□□□ 0.99
HOXA9-202ENST00000396345 SFPQP23246 707 aaKnown RBP eCLIP21.24■□□□□ 0.99
HOXA9-202ENST00000396345 MAPK7Q13164 816 aa21.24■□□□□ 0.99
HOXA9-202ENST00000396345 RASIP1Q5U651 963 aa21.24■□□□□ 0.99
HOXA9-202ENST00000396345 MRPS27Q92552 414 aaKnown RBP21.24■□□□□ 0.99
HOXA9-202ENST00000396345 REEP2Q9BRK0 252 aa21.24■□□□□ 0.99
HOXA9-202ENST00000396345 FTHL17Q9BXU8 183 aa21.24■□□□□ 0.99
HOXA9-202ENST00000396345 CXXC1Q9P0U4 656 aaPredicted RBP21.24■□□□□ 0.99
HOXA9-202ENST00000396345 FAM237AA0A1B0GTK4 181 aa21.23■□□□□ 0.99
HOXA9-202ENST00000396345 SFI1A8K8P3 1242 aa21.23■□□□□ 0.99
HOXA9-202ENST00000396345 NAMPTP43490 491 aa21.23■□□□□ 0.99
HOXA9-202ENST00000396345 KCNJ6P48051 423 aa21.23■□□□□ 0.99
HOXA9-202ENST00000396345 FXR1P51114 621 aaKnown RBP eCLIP21.23■□□□□ 0.99
HOXA9-202ENST00000396345 CACNB1Q02641 598 aaPredicted RBP21.23■□□□□ 0.99
HOXA9-202ENST00000396345 GIT2Q14161 759 aa21.23■□□□□ 0.99
HOXA9-202ENST00000396345 FAM43BQ6ZT52 329 aaPredicted RBP21.23■□□□□ 0.99
HOXA9-202ENST00000396345 IFNLR1Q8IU57 520 aaPredicted RBP21.23■□□□□ 0.99
HOXA9-202ENST00000396345 NFKBIZQ9BYH8 718 aa21.23■□□□□ 0.99
HOXA9-202ENST00000396345 TMX1Q9H3N1 280 aa21.23■□□□□ 0.99
HOXA9-202ENST00000396345 MINDY3Q9H8M7 445 aa21.23■□□□□ 0.99
HOXA9-202ENST00000396345 ODF2LQ9ULJ1 636 aa21.23■□□□□ 0.99
HOXA9-202ENST00000396345 HPSEQ9Y251 543 aa21.23■□□□□ 0.99
HOXA9-202ENST00000396345 SLC4A7Q9Y6M7 1214 aa21.23■□□□□ 0.99
HOXA9-202ENST00000396345 MYH11P35749 1972 aa21.23■□□□□ 0.99
HOXA9-202ENST00000396345 MICAL3Q7RTP6 2002 aa21.22■□□□□ 0.99
HOXA9-202ENST00000396345 MYMKA6NI61 221 aa21.22■□□□□ 0.99
HOXA9-202ENST00000396345 NDUFA8P51970 172 aa21.22■□□□□ 0.99
HOXA9-202ENST00000396345 PEX3P56589 373 aa21.22■□□□□ 0.99
HOXA9-202ENST00000396345 DMP1Q13316 513 aaPredicted RBP21.22■□□□□ 0.99
HOXA9-202ENST00000396345 CATSPER4Q7RTX7 472 aa21.22■□□□□ 0.99
HOXA9-202ENST00000396345 ZBTB8OSQ8IWT0 167 aa21.22■□□□□ 0.99
HOXA9-202ENST00000396345 DEPTORQ8TB45 409 aa21.22■□□□□ 0.99
HOXA9-202ENST00000396345 LRRC27Q9C0I9 530 aa21.22■□□□□ 0.99
HOXA9-202ENST00000396345 C2orf40Q9H1Z8 148 aa21.22■□□□□ 0.99
HOXA9-202ENST00000396345 TNMDQ9H2S6 317 aa21.22■□□□□ 0.99
HOXA9-202ENST00000396345 C17orf75Q9HAS0 396 aa21.22■□□□□ 0.99
HOXA9-202ENST00000396345 MAGEF1Q9HAY2 307 aa21.22■□□□□ 0.99
HOXA9-202ENST00000396345 RANBP2P49792 3224 aaKnown RBP21.22■□□□□ 0.99
HOXA9-202ENST00000396345 TRIOBPQ9H2D6 2365 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 CCDC169A6NNP5 214 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 INO80B-WBP1J3KQ70 363 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 TBCAO75347 108 aaKnown RBP21.21■□□□□ 0.99
HOXA9-202ENST00000396345 FAM13AO94988 1023 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 PLS3P13797 630 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 SYKP43405 635 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 NPTX2P47972 431 aa21.21■□□□□ 0.99
HOXA9-202ENST00000396345 WDR5P61964 334 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms