RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 SRP68Q9UHB9 627 aaKnown RBP10.42□□□□□ -0.74
CDRT1-204ENST00000395906 ATRNO75882 1429 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 A0A1W2PQC6 194 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 POTEFA5A3E0 1075 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 GNPATO15228 680 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 STRNO43815 780 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 CDK4P11802 303 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 ARFIP2P53365 341 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 ERVK-9P63128 1117 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 CYP27A1Q02318 531 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 CYP4A11Q02928 519 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 TBL3Q12788 808 aaKnown RBP10.42□□□□□ -0.74
CDRT1-204ENST00000395906 TCP11X2Q5H9J9 407 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 SPDYCQ5MJ68 293 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 RNF43Q68DV7 783 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 LRRC8BQ6P9F7 803 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 C14orf80Q86SX3 495 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 TREML1Q86YW5 311 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 LRRC49Q8IUZ0 686 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 GRAMD1CQ8IYS0 662 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 GAB3Q8WWW8 586 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 ZNF184Q99676 751 aaPredicted RBP10.42□□□□□ -0.74
CDRT1-204ENST00000395906 CCT7Q99832 543 aa10.42□□□□□ -0.74
CDRT1-204ENST00000395906 GPHNQ9NQX3 736 aaPredicted RBP10.42□□□□□ -0.74
CDRT1-204ENST00000395906 MATN2O00339 956 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 SPTLC1O15269 473 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 TTI1O43156 1089 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 NCK2O43639 380 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 CBFA2T3O75081 653 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 LCA5LO95447 670 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 HSPA8P11142 646 aaKnown RBP10.41□□□□□ -0.74
CDRT1-204ENST00000395906 ENDOUP21128 410 aaKnown RBP10.41□□□□□ -0.74
CDRT1-204ENST00000395906 B3GNT6Q6ZMB0 384 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 TRIM67Q6ZTA4 783 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 STOX1Q6ZVD7 989 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 UNC13DQ70J99 1090 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 SLC7A5P1Q8MH63 180 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.41□□□□□ -0.74
CDRT1-204ENST00000395906 UHMK1Q8TAS1 419 aaKnown RBP10.41□□□□□ -0.74
CDRT1-204ENST00000395906 NRG4Q8WWG1 115 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 NMD3Q96D46 503 aaKnown RBP10.41□□□□□ -0.74
CDRT1-204ENST00000395906 PGM2Q96G03 612 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 DENND2DQ9H6A0 471 aaPredicted RBP10.41□□□□□ -0.74
CDRT1-204ENST00000395906 SEC31BQ9NQW1 1179 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 TDRKHQ9Y2W6 561 aaKnown RBP10.41□□□□□ -0.74
CDRT1-204ENST00000395906 KCNJ18B7U540 433 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 PPP1R3GB7ZBB8 358 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 ENTPD5O75356 428 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 STK10O94804 968 aaKnown RBP10.41□□□□□ -0.74
CDRT1-204ENST00000395906 SLC34A1Q06495 639 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 KCNJ12Q14500 433 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 WDR72Q3MJ13 1102 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 KLHL35Q6PF15 583 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 TMC3Q7Z5M5 1100 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 ZBED8Q8IZ13 594 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 MB21D1Q8N884 522 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 FAM133AQ8N9E0 248 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 DGCR14Q96DF8 476 aaKnown RBP10.41□□□□□ -0.74
CDRT1-204ENST00000395906 DNAJC1Q96KC8 554 aaKnown RBP10.41□□□□□ -0.74
CDRT1-204ENST00000395906 TPK1Q9H3S4 243 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 ATAD3AQ9NVI7 634 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 FGFR1OP2Q9NVK5 253 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 TRMT112Q9UI30 125 aaKnown RBP10.41□□□□□ -0.74
CDRT1-204ENST00000395906 PAPPAQ13219 1627 aa10.41□□□□□ -0.74
CDRT1-204ENST00000395906 OXSR1O95747 527 aaPredicted RBP10.4□□□□□ -0.74
CDRT1-204ENST00000395906 IL6STP40189 918 aaPredicted RBP10.4□□□□□ -0.74
CDRT1-204ENST00000395906 IFNAR2P48551 515 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 CASP7P55210 303 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 RELAQ04206 551 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 GIT2Q14161 759 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 Q6ZNX1 250 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 HS2ST1Q7LGA3 356 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 NUP93Q8N1F7 819 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 SLC43A3Q8NBI5 491 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 ITPKCQ96DU7 683 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 DYDC2Q96IM9 177 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 IFIH1Q9BYX4 1025 aaKnown RBP10.4□□□□□ -0.74
CDRT1-204ENST00000395906 PAG1Q9NWQ8 432 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 KLHL14Q9P2G3 628 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 CTNND2Q9UQB3 1225 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 BHMG1C9JSJ3 638 aaPredicted RBP10.4□□□□□ -0.74
CDRT1-204ENST00000395906 E9PBE3 544 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 IARSP41252 1262 aaKnown RBP10.4□□□□□ -0.74
CDRT1-204ENST00000395906 TMED10P49755 219 aaKnown RBP10.4□□□□□ -0.74
CDRT1-204ENST00000395906 AACSQ86V21 672 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 STK11IPQ8N1F8 1099 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 BBS5Q8N3I7 341 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.4□□□□□ -0.74
CDRT1-204ENST00000395906 TBC1D10AQ9BXI6 508 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 CCDC8Q9H0W5 538 aaPredicted RBP10.4□□□□□ -0.74
CDRT1-204ENST00000395906 PCDHA13Q9Y5I0 950 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.4□□□□□ -0.74
CDRT1-204ENST00000395906 NDUFB9Q9Y6M9 179 aa10.4□□□□□ -0.74
CDRT1-204ENST00000395906 MYH10P35580 1976 aa10.4□□□□□ -0.75
CDRT1-204ENST00000395906 COL15A1P39059 1388 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 SPECC1L-ADORA2AF8WAN1 911 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 FOXO4P98177 505 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 ACVR2BQ13705 512 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 CNGA2Q16280 664 aa10.39□□□□□ -0.75
CDRT1-204ENST00000395906 DEPDC1Q5TB30 811 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms