RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 MEIS3P2A8K0S8 358 aa18.12■□□□□ 0.49
CXCL12-206ENST00000395795 NCK2O43639 380 aa18.12■□□□□ 0.49
CXCL12-206ENST00000395795 FOSBP53539 338 aa18.12■□□□□ 0.49
CXCL12-206ENST00000395795 CTTNQ14247 550 aaKnown RBP18.12■□□□□ 0.49
CXCL12-206ENST00000395795 RHPN2Q8IUC4 686 aa18.12■□□□□ 0.49
CXCL12-206ENST00000395795 NAP1L4Q99733 375 aaKnown RBP18.12■□□□□ 0.49
CXCL12-206ENST00000395795 GCOM2Q9BZD3 368 aaPredicted RBP18.12■□□□□ 0.49
CXCL12-206ENST00000395795 RAPGEFL1Q9UHV5 662 aa18.12■□□□□ 0.49
CXCL12-206ENST00000395795 LYPLA2O95372 231 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 EOMESO95936 686 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 YWHABP31946 246 aaKnown RBP18.11■□□□□ 0.49
CXCL12-206ENST00000395795 PBX3P40426 434 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 RBM10P98175 930 aaKnown RBP18.11■□□□□ 0.49
CXCL12-206ENST00000395795 CDC42EP1Q00587 391 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 PLCB3Q01970 1234 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 CYP4A11Q02928 519 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 UBE3AQ05086 875 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 ZP2Q05996 745 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 KCNC3Q14003 757 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 PUS10Q3MIT2 529 aaKnown RBP18.11■□□□□ 0.49
CXCL12-206ENST00000395795 NCAPH2Q6IBW4 605 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 SLFN12Q8IYM2 578 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 EFHBQ8N7U6 833 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 TMEM143Q96AN5 459 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 CEP170P1Q96L14 293 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 IGFLR1Q9H665 355 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 CHST12Q9NRB3 414 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 ARID2Q68CP9 1835 aa18.11■□□□□ 0.49
CXCL12-206ENST00000395795 PI4K2BG5E9Z4 385 aa18.1■□□□□ 0.49
CXCL12-206ENST00000395795 MBTPS2O43462 519 aa18.1■□□□□ 0.49
CXCL12-206ENST00000395795 B4GALT3O60512 393 aa18.1■□□□□ 0.49
CXCL12-206ENST00000395795 ZSCAN20P17040 1043 aaPredicted RBP18.1■□□□□ 0.49
CXCL12-206ENST00000395795 LAG3P18627 525 aa18.1■□□□□ 0.49
CXCL12-206ENST00000395795 HOXA11P31270 313 aaPredicted RBP18.1■□□□□ 0.49
CXCL12-206ENST00000395795 PHKA2P46019 1235 aa18.1■□□□□ 0.49
CXCL12-206ENST00000395795 SMAD2Q15796 467 aaKnown RBP18.1■□□□□ 0.49
CXCL12-206ENST00000395795 KCNT2Q6UVM3 1135 aa18.1■□□□□ 0.49
CXCL12-206ENST00000395795 GJD3Q8N144 294 aa18.1■□□□□ 0.49
CXCL12-206ENST00000395795 HELQQ8TDG4 1101 aa18.1■□□□□ 0.49
CXCL12-206ENST00000395795 PRPF31Q8WWY3 499 aaKnown RBP18.1■□□□□ 0.49
CXCL12-206ENST00000395795 EIF2AK1Q9BQI3 630 aaKnown RBP18.1■□□□□ 0.49
CXCL12-206ENST00000395795 RNF216Q9NWF9 866 aaPredicted RBP18.1■□□□□ 0.49
CXCL12-206ENST00000395795 LIMCH1Q9UPQ0 1083 aa18.1■□□□□ 0.49
CXCL12-206ENST00000395795 PPME1Q9Y570 386 aa18.1■□□□□ 0.49
CXCL12-206ENST00000395795 PCDHB12Q9Y5F1 795 aa18.1■□□□□ 0.49
CXCL12-206ENST00000395795 COL4A3BPQ9Y5P4 624 aa18.1■□□□□ 0.49
CXCL12-206ENST00000395795 ZNF623O75123 536 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 EYA4O95677 639 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 SPATA31C1P0DKV0 1188 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 NRIP1P48552 1158 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 DNM2P50570 870 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 GUCY1B3Q02153 619 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 EMC2Q15006 297 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 CLUL1Q15846 466 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 UBXN11Q5T124 520 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 CCDC83Q8IWF9 413 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 SLC39A11Q8N1S5 342 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 LRRC43Q8N309 656 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 LPPQ93052 612 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 NLRP4Q96MN2 994 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 SCLT1Q96NL6 688 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 ZSWIM4Q9H7M6 989 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 TLR9Q9NR96 1032 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 BMP2KQ9NSY1 1161 aaPredicted RBP18.09■□□□□ 0.49
CXCL12-206ENST00000395795 LZTS1Q9Y250 596 aa18.09■□□□□ 0.49
CXCL12-206ENST00000395795 A0A087WWV3 80 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 HOXA2O43364 376 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 SFPQP23246 707 aaKnown RBP eCLIP18.08■□□□□ 0.48
CXCL12-206ENST00000395795 RFC5P40937 340 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 LAMTOR4Q0VGL1 99 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 CALCRLQ16602 461 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 DUSP6Q16828 381 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 EP400NLQ6ZTU2 488 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 RBM23Q86U06 439 aaKnown RBP18.08■□□□□ 0.48
CXCL12-206ENST00000395795 FERMT3Q86UX7 667 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 TMEM173Q86WV6 379 aaPredicted RBP18.08■□□□□ 0.48
CXCL12-206ENST00000395795 THNSL1Q8IYQ7 743 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 SMRP1Q8NCR6 262 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 MRPS27Q92552 414 aaKnown RBP18.08■□□□□ 0.48
CXCL12-206ENST00000395795 JPH2Q9BR39 696 aaPredicted RBP18.08■□□□□ 0.48
CXCL12-206ENST00000395795 TTC12Q9H892 705 aaPredicted RBP18.08■□□□□ 0.48
CXCL12-206ENST00000395795 BRMS1Q9HCU9 246 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 AAASQ9NRG9 546 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 AGPAT5Q9NUQ2 364 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 FAM105AQ9NUU6 356 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 DACT1Q9NYF0 836 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 PCDHA12Q9UN75 941 aa18.08■□□□□ 0.48
CXCL12-206ENST00000395795 HIDE1A8MVS5 230 aa18.07■□□□□ 0.48
CXCL12-206ENST00000395795 PER2O15055 1255 aa18.07■□□□□ 0.48
CXCL12-206ENST00000395795 NEMFO60524 1076 aa18.07■□□□□ 0.48
CXCL12-206ENST00000395795 DKC1O60832 514 aaKnown RBP eCLIP18.07■□□□□ 0.48
CXCL12-206ENST00000395795 COL9A1P20849 921 aa18.07■□□□□ 0.48
CXCL12-206ENST00000395795 AFF1P51825 1210 aaKnown RBP18.07■□□□□ 0.48
CXCL12-206ENST00000395795 POLGP54098 1239 aaPredicted RBP18.07■□□□□ 0.48
CXCL12-206ENST00000395795 COASYQ13057 564 aa18.07■□□□□ 0.48
CXCL12-206ENST00000395795 SMAD4Q13485 552 aaKnown RBP18.07■□□□□ 0.48
CXCL12-206ENST00000395795 CSPP1Q1MSJ5 1256 aa18.07■□□□□ 0.48
CXCL12-206ENST00000395795 SPOUT1Q5T280 376 aaKnown RBP18.07■□□□□ 0.48
CXCL12-206ENST00000395795 AGMOQ6ZNB7 445 aa18.07■□□□□ 0.48
CXCL12-206ENST00000395795 MRPL10Q7Z7H8 261 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms