RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 C5orf42Q9H799 3197 aa20.23■□□□□ 0.83
CXCL12-204ENST00000395793 A0A0U1RQF3 1178 aa20.22■□□□□ 0.83
CXCL12-204ENST00000395793 C19orf67A6NJJ6 358 aa20.22■□□□□ 0.83
CXCL12-204ENST00000395793 FSCN2O14926 492 aa20.22■□□□□ 0.83
CXCL12-204ENST00000395793 TBX3O15119 743 aa20.22■□□□□ 0.83
CXCL12-204ENST00000395793 LAG3P18627 525 aa20.22■□□□□ 0.83
CXCL12-204ENST00000395793 KRT2P35908 639 aa20.22■□□□□ 0.83
CXCL12-204ENST00000395793 SMAD4Q13485 552 aaKnown RBP20.22■□□□□ 0.83
CXCL12-204ENST00000395793 SMAD2Q15796 467 aaKnown RBP20.22■□□□□ 0.83
CXCL12-204ENST00000395793 RHPN2Q8IUC4 686 aa20.22■□□□□ 0.83
CXCL12-204ENST00000395793 LRRC43Q8N309 656 aa20.22■□□□□ 0.83
CXCL12-204ENST00000395793 VN1R2Q8NFZ6 395 aa20.22■□□□□ 0.83
CXCL12-204ENST00000395793 GCOM2Q9BZD3 368 aaPredicted RBP20.22■□□□□ 0.83
CXCL12-204ENST00000395793 TLR9Q9NR96 1032 aa20.22■□□□□ 0.83
CXCL12-204ENST00000395793 RGL1Q9NZL6 768 aa20.22■□□□□ 0.83
CXCL12-204ENST00000395793 CD207Q9UJ71 328 aa20.22■□□□□ 0.83
CXCL12-204ENST00000395793 PER2O15055 1255 aa20.21■□□□□ 0.83
CXCL12-204ENST00000395793 HOXA2O43364 376 aa20.21■□□□□ 0.83
CXCL12-204ENST00000395793 P4HBP07237 508 aaKnown RBP20.21■□□□□ 0.83
CXCL12-204ENST00000395793 NDUFV1P49821 464 aa20.21■□□□□ 0.83
CXCL12-204ENST00000395793 FOSBP53539 338 aa20.21■□□□□ 0.83
CXCL12-204ENST00000395793 EPHA7Q15375 998 aa20.21■□□□□ 0.83
CXCL12-204ENST00000395793 ZNF410Q86VK4 478 aa20.21■□□□□ 0.83
CXCL12-204ENST00000395793 HELQQ8TDG4 1101 aa20.21■□□□□ 0.83
CXCL12-204ENST00000395793 WASF1Q92558 559 aa20.21■□□□□ 0.83
CXCL12-204ENST00000395793 NLRP4Q96MN2 994 aa20.21■□□□□ 0.83
CXCL12-204ENST00000395793 LXNQ9BS40 222 aa20.21■□□□□ 0.83
CXCL12-204ENST00000395793 BMP2KQ9NSY1 1161 aaPredicted RBP20.21■□□□□ 0.83
CXCL12-204ENST00000395793 PRKAG3Q9UGI9 489 aa20.21■□□□□ 0.83
CXCL12-204ENST00000395793 BARX2Q9UMQ3 279 aaPredicted RBP20.21■□□□□ 0.83
CXCL12-204ENST00000395793 ZBTB39O15060 712 aa20.2■□□□□ 0.82
CXCL12-204ENST00000395793 DNM2P50570 870 aa20.2■□□□□ 0.82
CXCL12-204ENST00000395793 NEK4P51957 841 aa20.2■□□□□ 0.82
CXCL12-204ENST00000395793 PLCB3Q01970 1234 aa20.2■□□□□ 0.82
CXCL12-204ENST00000395793 TMEM31Q5JXX7 168 aa20.2■□□□□ 0.82
CXCL12-204ENST00000395793 NCAPH2Q6IBW4 605 aa20.2■□□□□ 0.82
CXCL12-204ENST00000395793 KCNT2Q6UVM3 1135 aa20.2■□□□□ 0.82
CXCL12-204ENST00000395793 ADHFE1Q8IWW8 467 aa20.2■□□□□ 0.82
CXCL12-204ENST00000395793 PPP2R3CQ969Q6 453 aa20.2■□□□□ 0.82
CXCL12-204ENST00000395793 DYDC2Q96IM9 177 aa20.2■□□□□ 0.82
CXCL12-204ENST00000395793 DHX33Q9H6R0 707 aaKnown RBP20.2■□□□□ 0.82
CXCL12-204ENST00000395793 IFT122Q9HBG6 1241 aa20.2■□□□□ 0.82
CXCL12-204ENST00000395793 FAM50BQ9Y247 325 aa20.2■□□□□ 0.82
CXCL12-204ENST00000395793 MEIS3P2A8K0S8 358 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 BTBD18B2RXH4 712 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 GPR37L1O60883 481 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 EYA4O95677 639 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 PHKA2P46019 1235 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 CTTNQ14247 550 aaKnown RBP20.19■□□□□ 0.82
CXCL12-204ENST00000395793 CSPP1Q1MSJ5 1256 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 C4orf19Q8IY42 314 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 ABI1Q8IZP0 508 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 SMRP1Q8NCR6 262 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 MICAL1Q8TDZ2 1067 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 MRPS27Q92552 414 aaKnown RBP20.19■□□□□ 0.82
CXCL12-204ENST00000395793 LPPQ93052 612 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 CEP170P1Q96L14 293 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 ZNF558Q96NG5 402 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 NAP1L4Q99733 375 aaKnown RBP20.19■□□□□ 0.82
CXCL12-204ENST00000395793 TLE6Q9H808 572 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 DACT1Q9NYF0 836 aa20.19■□□□□ 0.82
CXCL12-204ENST00000395793 PIN4Q9Y237 131 aaKnown RBP20.19■□□□□ 0.82
CXCL12-204ENST00000395793 EOMESO95936 686 aa20.18■□□□□ 0.82
CXCL12-204ENST00000395793 SFPQP23246 707 aaKnown RBP eCLIP20.18■□□□□ 0.82
CXCL12-204ENST00000395793 YWHABP31946 246 aaKnown RBP20.18■□□□□ 0.82
CXCL12-204ENST00000395793 CDC42EP1Q00587 391 aa20.18■□□□□ 0.82
CXCL12-204ENST00000395793 CYP4A11Q02928 519 aa20.18■□□□□ 0.82
CXCL12-204ENST00000395793 DUSP6Q16828 381 aa20.18■□□□□ 0.82
CXCL12-204ENST00000395793 LONRF3Q496Y0 759 aa20.18■□□□□ 0.82
CXCL12-204ENST00000395793 PLPP4Q5VZY2 271 aa20.18■□□□□ 0.82
CXCL12-204ENST00000395793 DIS3L2Q8IYB7 885 aaKnown RBP20.18■□□□□ 0.82
CXCL12-204ENST00000395793 TMEM143Q96AN5 459 aa20.18■□□□□ 0.82
CXCL12-204ENST00000395793 TRAIPQ9BWF2 469 aa20.18■□□□□ 0.82
CXCL12-204ENST00000395793 MINDY3Q9H8M7 445 aa20.18■□□□□ 0.82
CXCL12-204ENST00000395793 CHST12Q9NRB3 414 aa20.18■□□□□ 0.82
CXCL12-204ENST00000395793 LZTS1Q9Y250 596 aa20.18■□□□□ 0.82
CXCL12-204ENST00000395793 COL4A3BPQ9Y5P4 624 aa20.18■□□□□ 0.82
CXCL12-204ENST00000395793 HIDE1A8MVS5 230 aa20.17■□□□□ 0.82
CXCL12-204ENST00000395793 DKC1O60832 514 aaKnown RBP eCLIP20.17■□□□□ 0.82
CXCL12-204ENST00000395793 POLGP54098 1239 aaPredicted RBP20.17■□□□□ 0.82
CXCL12-204ENST00000395793 COASYQ13057 564 aa20.17■□□□□ 0.82
CXCL12-204ENST00000395793 KCNC3Q14003 757 aa20.17■□□□□ 0.82
CXCL12-204ENST00000395793 TWF2Q6IBS0 349 aaKnown RBP20.17■□□□□ 0.82
CXCL12-204ENST00000395793 CATSPER4Q7RTX7 472 aa20.17■□□□□ 0.82
CXCL12-204ENST00000395793 SLC39A11Q8N1S5 342 aa20.17■□□□□ 0.82
CXCL12-204ENST00000395793 JPH2Q9BR39 696 aaPredicted RBP20.17■□□□□ 0.82
CXCL12-204ENST00000395793 BRMS1Q9HCU9 246 aa20.17■□□□□ 0.82
CXCL12-204ENST00000395793 NT5C1B-RDH14C9J2C7 533 aa20.16■□□□□ 0.82
CXCL12-204ENST00000395793 MARCH6O60337 910 aa20.16■□□□□ 0.82
CXCL12-204ENST00000395793 SLITRK3O94933 977 aa20.16■□□□□ 0.82
CXCL12-204ENST00000395793 EMC2Q15006 297 aa20.16■□□□□ 0.82
CXCL12-204ENST00000395793 TMEM173Q86WV6 379 aaPredicted RBP20.16■□□□□ 0.82
CXCL12-204ENST00000395793 SLFN12Q8IYM2 578 aa20.16■□□□□ 0.82
CXCL12-204ENST00000395793 PRPF31Q8WWY3 499 aaKnown RBP20.16■□□□□ 0.82
CXCL12-204ENST00000395793 SLC7A3Q8WY07 619 aa20.16■□□□□ 0.82
CXCL12-204ENST00000395793 TCF25Q9BQ70 676 aa20.16■□□□□ 0.82
CXCL12-204ENST00000395793 EIF2AK1Q9BQI3 630 aaKnown RBP20.16■□□□□ 0.82
CXCL12-204ENST00000395793 XPNPEP1Q9NQW7 623 aa20.16■□□□□ 0.82
CXCL12-204ENST00000395793 AGPAT5Q9NUQ2 364 aa20.16■□□□□ 0.82
CXCL12-204ENST00000395793 FAM105AQ9NUU6 356 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 297.5 ms