RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PBX4Q9BYU1 374 aa18.38■□□□□ 0.53
CXCL1-201ENST00000395761 CFAP45Q9UL16 551 aa18.38■□□□□ 0.53
CXCL1-201ENST00000395761 MGEA5O60502 916 aa18.37■□□□□ 0.53
CXCL1-201ENST00000395761 SSBP05455 408 aaKnown RBP eCLIP18.37■□□□□ 0.53
CXCL1-201ENST00000395761 PLA2G4BP0C869 781 aa18.37■□□□□ 0.53
CXCL1-201ENST00000395761 MYOGP15173 224 aa18.37■□□□□ 0.53
CXCL1-201ENST00000395761 PLCG1P19174 1290 aa18.37■□□□□ 0.53
CXCL1-201ENST00000395761 MXD4Q14582 209 aaPredicted RBP18.37■□□□□ 0.53
CXCL1-201ENST00000395761 AXDND1Q5T1B0 1012 aaPredicted RBP18.37■□□□□ 0.53
CXCL1-201ENST00000395761 RINT1Q6NUQ1 792 aa18.37■□□□□ 0.53
CXCL1-201ENST00000395761 FAM117BQ6P1L5 589 aa18.37■□□□□ 0.53
CXCL1-201ENST00000395761 MYOCDQ8IZQ8 938 aa18.37■□□□□ 0.53
CXCL1-201ENST00000395761 SYT2Q8N9I0 419 aaPredicted RBP18.37■□□□□ 0.53
CXCL1-201ENST00000395761 RASSF8Q8NHQ8 419 aa18.37■□□□□ 0.53
CXCL1-201ENST00000395761 BSNDQ8WZ55 320 aa18.37■□□□□ 0.53
CXCL1-201ENST00000395761 PANK2Q9BZ23 570 aa18.37■□□□□ 0.53
CXCL1-201ENST00000395761 MINDY3Q9H8M7 445 aa18.37■□□□□ 0.53
CXCL1-201ENST00000395761 BLOC1S4Q9NUP1 217 aa18.37■□□□□ 0.53
CXCL1-201ENST00000395761 RCOR1Q9UKL0 485 aa18.37■□□□□ 0.53
CXCL1-201ENST00000395761 AMHP03971 560 aa18.36■□□□□ 0.53
CXCL1-201ENST00000395761 LAMA2P24043 3122 aaKnown RBP18.36■□□□□ 0.53
CXCL1-201ENST00000395761 SLC12A3P55017 1021 aa18.36■□□□□ 0.53
CXCL1-201ENST00000395761 CAPSQ13938 189 aa18.36■□□□□ 0.53
CXCL1-201ENST00000395761 C1orf186Q6ZWK4 172 aa18.36■□□□□ 0.53
CXCL1-201ENST00000395761 KCTD17Q8N5Z5 321 aa18.36■□□□□ 0.53
CXCL1-201ENST00000395761 FTHL17Q9BXU8 183 aa18.36■□□□□ 0.53
CXCL1-201ENST00000395761 TSPYL2Q9H2G4 693 aaPredicted RBP18.36■□□□□ 0.53
CXCL1-201ENST00000395761 PCDHA7Q9UN72 937 aa18.36■□□□□ 0.53
CXCL1-201ENST00000395761 YBX2Q9Y2T7 364 aaKnown RBP18.36■□□□□ 0.53
CXCL1-201ENST00000395761 CUTAO60888 179 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 UPP2O95045 317 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 NCLP19338 710 aaKnown RBP18.35■□□□□ 0.53
CXCL1-201ENST00000395761 PTENP60484 403 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 DHX8Q14562 1220 aaKnown RBP18.35■□□□□ 0.53
CXCL1-201ENST00000395761 MCM6Q14566 821 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 DSC3Q14574 896 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 ODR4Q5SWX8 454 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 CLEC17AQ6ZS10 378 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 SRGAP1Q7Z6B7 1085 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 DAW1Q8N136 415 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 KCNG4Q8TDN1 519 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 RAD54LQ92698 747 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 TOP1MTQ969P6 601 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 ADAM2Q99965 735 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 MICAL3Q7RTP6 2002 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 PTPRSQ13332 1948 aa18.35■□□□□ 0.53
CXCL1-201ENST00000395761 A0A087X0B3 334 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 NPHP3-ACAD11A0A0J9YXS1 232 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 HIP1RO75146 1068 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 GJB5O95377 273 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 DNAJB2P25686 324 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 ME1P48163 572 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 RAD51AP2Q09MP3 1159 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 TFDP1Q14186 410 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 NAALADL2Q58DX5 795 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 ARSHQ5FYA8 562 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 SHC4Q6S5L8 630 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 LEO1Q8WVC0 666 aaPredicted RBP18.34■□□□□ 0.53
CXCL1-201ENST00000395761 ZBED2Q9BTP6 218 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 INO80BQ9C086 356 aaPredicted RBP18.34■□□□□ 0.53
CXCL1-201ENST00000395761 CCDC39Q9UFE4 941 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 MSRAQ9UJ68 235 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 PCDHA11Q9Y5I1 949 aa18.34■□□□□ 0.53
CXCL1-201ENST00000395761 DENND3A2RUS2 1198 aa18.33■□□□□ 0.52
CXCL1-201ENST00000395761 IBSPP21815 317 aaPredicted RBP18.33■□□□□ 0.52
CXCL1-201ENST00000395761 SFPQP23246 707 aaKnown RBP eCLIP18.33■□□□□ 0.52
CXCL1-201ENST00000395761 TXLNAP40222 546 aa18.33■□□□□ 0.52
CXCL1-201ENST00000395761 PHKA2P46019 1235 aa18.33■□□□□ 0.52
CXCL1-201ENST00000395761 KRT85P78386 507 aa18.33■□□□□ 0.52
CXCL1-201ENST00000395761 POU5F1BQ06416 359 aa18.33■□□□□ 0.52
CXCL1-201ENST00000395761 MAPK7Q13164 816 aa18.33■□□□□ 0.52
CXCL1-201ENST00000395761 RRAGBQ5VZM2 374 aa18.33■□□□□ 0.52
CXCL1-201ENST00000395761 CATSPER4Q7RTX7 472 aa18.33■□□□□ 0.52
CXCL1-201ENST00000395761 CRIPAKQ8N1N5 446 aa18.33■□□□□ 0.52
CXCL1-201ENST00000395761 NKX2-4Q9H2Z4 354 aa18.33■□□□□ 0.52
CXCL1-201ENST00000395761 RGS18Q9NS28 235 aa18.33■□□□□ 0.52
CXCL1-201ENST00000395761 LCHNA4D1U4 455 aa18.32■□□□□ 0.52
CXCL1-201ENST00000395761 LRRIQ4A6NIV6 560 aa18.32■□□□□ 0.52
CXCL1-201ENST00000395761 SFI1A8K8P3 1242 aa18.32■□□□□ 0.52
CXCL1-201ENST00000395761 TLL1O43897 1013 aa18.32■□□□□ 0.52
CXCL1-201ENST00000395761 GUCY2CP25092 1073 aa18.32■□□□□ 0.52
CXCL1-201ENST00000395761 CACNB1Q02641 598 aaPredicted RBP18.32■□□□□ 0.52
CXCL1-201ENST00000395761 MBTD1Q05BQ5 628 aa18.32■□□□□ 0.52
CXCL1-201ENST00000395761 RAB30Q15771 203 aa18.32■□□□□ 0.52
CXCL1-201ENST00000395761 Q7L0L9 218 aa18.32■□□□□ 0.52
CXCL1-201ENST00000395761 GPBP1Q86WP2 473 aa18.32■□□□□ 0.52
CXCL1-201ENST00000395761 IFNLR1Q8IU57 520 aaPredicted RBP18.32■□□□□ 0.52
CXCL1-201ENST00000395761 PDILTQ8N807 584 aa18.32■□□□□ 0.52
CXCL1-201ENST00000395761 KIFAP3Q92845 792 aa18.32■□□□□ 0.52
CXCL1-201ENST00000395761 TIFAQ96CG3 184 aa18.32■□□□□ 0.52
CXCL1-201ENST00000395761 SPATA32Q96LK8 384 aa18.32■□□□□ 0.52
CXCL1-201ENST00000395761 C9IYK1 514 aa18.31■□□□□ 0.52
CXCL1-201ENST00000395761 INO80B-WBP1J3KQ70 363 aa18.31■□□□□ 0.52
CXCL1-201ENST00000395761 ARHGEF15O94989 841 aa18.31■□□□□ 0.52
CXCL1-201ENST00000395761 CA3P07451 260 aa18.31■□□□□ 0.52
CXCL1-201ENST00000395761 ZSCAN20P17040 1043 aaPredicted RBP18.31■□□□□ 0.52
CXCL1-201ENST00000395761 HOXA11P31270 313 aaPredicted RBP18.31■□□□□ 0.52
CXCL1-201ENST00000395761 SARSP49591 514 aaKnown RBP18.31■□□□□ 0.52
CXCL1-201ENST00000395761 FAM189BP81408 668 aa18.31■□□□□ 0.52
CXCL1-201ENST00000395761 SLC24A5Q71RS6 500 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms