RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 EFCAB12Q6NXP0 572 aa15.24■□□□□ 0.03
SCAF11-203ENST00000395453 FAM228AQ86W67 206 aa15.24■□□□□ 0.03
SCAF11-203ENST00000395453 POF1BQ8WVV4 589 aa15.24■□□□□ 0.03
SCAF11-203ENST00000395453 ADAM2Q99965 735 aa15.24■□□□□ 0.03
SCAF11-203ENST00000395453 ADAMTS10Q9H324 1103 aa15.24■□□□□ 0.03
SCAF11-203ENST00000395453 BARX2Q9UMQ3 279 aaPredicted RBP15.24■□□□□ 0.03
SCAF11-203ENST00000395453 KCNJ14Q9UNX9 436 aa15.24■□□□□ 0.03
SCAF11-203ENST00000395453 MRPL42Q9Y6G3 142 aaKnown RBP15.24■□□□□ 0.03
SCAF11-203ENST00000395453 FAM186AA6NE01 2351 aa15.24■□□□□ 0.03
SCAF11-203ENST00000395453 H0Y858 1186 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 CHMP2AO43633 222 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 GLP2RO95838 553 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 TMOD1P28289 359 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 CLCN3P51790 818 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 AK2P54819 239 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 NLRP11P59045 1033 aaKnown RBP15.23■□□□□ 0.03
SCAF11-203ENST00000395453 ANKRD1Q15327 319 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 INF2Q27J81 1249 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 SLC24A5Q71RS6 500 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 RBM23Q86U06 439 aaKnown RBP15.23■□□□□ 0.03
SCAF11-203ENST00000395453 KLHL23Q8NBE8 558 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 CEP89Q96ST8 783 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 OSMRQ99650 979 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 NIFKQ9BYG3 293 aaKnown RBP15.23■□□□□ 0.03
SCAF11-203ENST00000395453 TLR9Q9NR96 1032 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 C1orf112Q9NSG2 853 aa15.23■□□□□ 0.03
SCAF11-203ENST00000395453 CACNA1AO00555 2505 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 FSD2A1L4K1 749 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 PTPN21Q16825 1174 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 XKR3Q5GH77 459 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 PPP4R3AQ6IN85 833 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 MIER3Q7Z3K6 550 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 LRRC71Q8N4P6 559 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 MAP7D2Q96T17 732 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 PPP1R16BQ96T49 567 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 TLE6Q9H808 572 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 KCNMB3Q9NPA1 279 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 GJB4Q9NTQ9 266 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 DDX25Q9UHL0 483 aaKnown RBP15.22■□□□□ 0.03
SCAF11-203ENST00000395453 LRFN2Q9ULH4 789 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 PCDHB7Q9Y5E2 793 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 KIAA1671Q9BY89 1806 aa15.22■□□□□ 0.03
SCAF11-203ENST00000395453 FNDC1Q4ZHG4 1894 aaPredicted RBP15.22■□□□□ 0.03
SCAF11-203ENST00000395453 IGKV6-21A0A0C4DH24 114 aa15.21■□□□□ 0.03
SCAF11-203ENST00000395453 DENND3A2RUS2 1198 aa15.21■□□□□ 0.03
SCAF11-203ENST00000395453 SLC37A4O43826 429 aa15.21■□□□□ 0.03
SCAF11-203ENST00000395453 FDPSP14324 419 aaKnown RBP15.21■□□□□ 0.03
SCAF11-203ENST00000395453 XBP1P17861 261 aa15.21■□□□□ 0.03
SCAF11-203ENST00000395453 EIF4BP23588 611 aaKnown RBP15.21■□□□□ 0.03
SCAF11-203ENST00000395453 GATMP50440 423 aa15.21■□□□□ 0.03
SCAF11-203ENST00000395453 ERMP1Q7Z2K6 904 aa15.21■□□□□ 0.03
SCAF11-203ENST00000395453 OXER1Q8TDS5 423 aa15.21■□□□□ 0.03
SCAF11-203ENST00000395453 SUSD6Q92537 303 aa15.21■□□□□ 0.03
SCAF11-203ENST00000395453 RIPOR3Q96MK2 946 aa15.21■□□□□ 0.03
SCAF11-203ENST00000395453 FAM20AQ96MK3 541 aa15.21■□□□□ 0.03
SCAF11-203ENST00000395453 ELAC1Q9H777 363 aaKnown RBP15.21■□□□□ 0.03
SCAF11-203ENST00000395453 AKT3Q9Y243 479 aa15.21■□□□□ 0.03
SCAF11-203ENST00000395453 VPS13AQ96RL7 3174 aa15.21■□□□□ 0.03
SCAF11-203ENST00000395453 CCDC194A0A1B0GVG4 234 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 DTNBO60941 627 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 GCFC2P16383 781 aaKnown RBP15.2■□□□□ 0.02
SCAF11-203ENST00000395453 GPC3P51654 580 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 TBC1D8BQ0IIM8 1120 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 PPP2R5CQ13362 524 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 ME3Q16798 604 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 LETM2Q2VYF4 491 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 PAN2Q504Q3 1202 aaKnown RBP15.2■□□□□ 0.02
SCAF11-203ENST00000395453 FAM102BQ5T8I3 360 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 ASCL5Q7RTU5 278 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 NEK8Q86SG6 692 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 ZBTB33Q86T24 672 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 MICAL1Q8TDZ2 1067 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 CDCA3Q99618 268 aaPredicted RBP15.2■□□□□ 0.02
SCAF11-203ENST00000395453 TMEM161AQ9NX61 479 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 ORC3Q9UBD5 711 aaPredicted RBP15.2■□□□□ 0.02
SCAF11-203ENST00000395453 VAV3Q9UKW4 847 aa15.2■□□□□ 0.02
SCAF11-203ENST00000395453 EML1O00423 815 aa15.19■□□□□ 0.02
SCAF11-203ENST00000395453 EIF5BO60841 1220 aaKnown RBP15.19■□□□□ 0.02
SCAF11-203ENST00000395453 DARSP14868 501 aaKnown RBP15.19■□□□□ 0.02
SCAF11-203ENST00000395453 CDC42EP1Q00587 391 aa15.19■□□□□ 0.02
SCAF11-203ENST00000395453 UBE3AQ05086 875 aa15.19■□□□□ 0.02
SCAF11-203ENST00000395453 EARS2Q5JPH6 523 aaKnown RBP15.19■□□□□ 0.02
SCAF11-203ENST00000395453 WASF1Q92558 559 aa15.19■□□□□ 0.02
SCAF11-203ENST00000395453 HAS1Q92839 578 aa15.19■□□□□ 0.02
SCAF11-203ENST00000395453 DCHS1Q96JQ0 3298 aa15.19■□□□□ 0.02
SCAF11-203ENST00000395453 PLXNA3P51805 1871 aa15.19■□□□□ 0.02
SCAF11-203ENST00000395453 TMEM150BA6NC51 233 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 PRR23AA6NEV1 266 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 PER2O15055 1255 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 TBX3O15119 743 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 MAFO75444 373 aaPredicted RBP15.18■□□□□ 0.02
SCAF11-203ENST00000395453 LARGE1O95461 756 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 SRGAP2BP0DMP2 458 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 NBL1P41271 181 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 PSMC5P62195 406 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 DRP2Q13474 957 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 MTERF2Q49AM1 385 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 PIK3AP1Q6ZUJ8 805 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 ANO5Q75V66 913 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 NECAB1Q8N987 351 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms