RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 WDR81Q562E7 1941 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 ZBTB43O43298 467 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 AOC1P19801 751 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 GPC3P51654 580 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 TDGQ13569 410 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 CREB3L3Q68CJ9 461 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 TRMT1LQ7Z2T5 733 aaKnown RBP22.27■■□□□ 1.16
UPK3B-203ENST00000394849 ADSSL1Q8N142 457 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 LRRC2Q9BYS8 371 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 LSG1Q9H089 658 aaKnown RBP22.27■■□□□ 1.16
UPK3B-203ENST00000394849 SEMA4AQ9H3S1 761 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 SMOC2Q9H3U7 446 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 SFXN1Q9H9B4 322 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 SAMM50Q9Y512 469 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 DCHS1Q96JQ0 3298 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 ZNF292O60281 2723 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 DMDP11532 3685 aa22.27■■□□□ 1.16
UPK3B-203ENST00000394849 WDR64B1ANS9 1081 aa22.26■■□□□ 1.15
UPK3B-203ENST00000394849 NECTIN1Q15223 517 aa22.26■■□□□ 1.15
UPK3B-203ENST00000394849 RNF20Q5VTR2 975 aa22.26■■□□□ 1.15
UPK3B-203ENST00000394849 CCDC149Q6ZUS6 474 aa22.26■■□□□ 1.15
UPK3B-203ENST00000394849 CCDC105Q8IYK2 499 aa22.26■■□□□ 1.15
UPK3B-203ENST00000394849 C12orf76Q8N812 135 aaPredicted RBP22.26■■□□□ 1.15
UPK3B-203ENST00000394849 FLCNQ8NFG4 579 aa22.26■■□□□ 1.15
UPK3B-203ENST00000394849 CCDC12Q8WUD4 166 aaPredicted RBP22.26■■□□□ 1.15
UPK3B-203ENST00000394849 SLC22A17Q8WUG5 538 aa22.26■■□□□ 1.15
UPK3B-203ENST00000394849 IGSF21Q96ID5 467 aa22.26■■□□□ 1.15
UPK3B-203ENST00000394849 CACNA1AO00555 2505 aa22.26■■□□□ 1.15
UPK3B-203ENST00000394849 DENND4AQ7Z401 1863 aa22.26■■□□□ 1.15
UPK3B-203ENST00000394849 ESYT2A0FGR8 921 aa22.25■■□□□ 1.15
UPK3B-203ENST00000394849 ZC3H11AO75152 810 aaKnown RBP eCLIP22.25■■□□□ 1.15
UPK3B-203ENST00000394849 OATP04181 439 aa22.25■■□□□ 1.15
UPK3B-203ENST00000394849 WEE2P0C1S8 567 aa22.25■■□□□ 1.15
UPK3B-203ENST00000394849 RCAN1P53805 252 aa22.25■■□□□ 1.15
UPK3B-203ENST00000394849 JAKMIP3Q5VZ66 844 aa22.25■■□□□ 1.15
UPK3B-203ENST00000394849 GPR149Q86SP6 731 aa22.25■■□□□ 1.15
UPK3B-203ENST00000394849 LRRC71Q8N4P6 559 aa22.25■■□□□ 1.15
UPK3B-203ENST00000394849 NLRP7Q8WX94 980 aa22.25■■□□□ 1.15
UPK3B-203ENST00000394849 GCOM2Q9BZD3 368 aaPredicted RBP22.25■■□□□ 1.15
UPK3B-203ENST00000394849 NT5C1B-RDH14C9J2C7 533 aa22.24■■□□□ 1.15
UPK3B-203ENST00000394849 EPCAMP16422 314 aa22.24■■□□□ 1.15
UPK3B-203ENST00000394849 TBC1D8BQ0IIM8 1120 aa22.24■■□□□ 1.15
UPK3B-203ENST00000394849 CWF19L1Q69YN2 538 aaKnown RBP22.24■■□□□ 1.15
UPK3B-203ENST00000394849 GLB1LQ6UWU2 654 aa22.24■■□□□ 1.15
UPK3B-203ENST00000394849 EMILIN2Q9BXX0 1053 aa22.24■■□□□ 1.15
UPK3B-203ENST00000394849 INO80BQ9C086 356 aaPredicted RBP22.24■■□□□ 1.15
UPK3B-203ENST00000394849 ZMYND12Q9H0C1 365 aa22.24■■□□□ 1.15
UPK3B-203ENST00000394849 C6orf50Q9HD87 102 aa22.24■■□□□ 1.15
UPK3B-203ENST00000394849 IGSF9Q9P2J2 1179 aa22.24■■□□□ 1.15
UPK3B-203ENST00000394849 DUSP12Q9UNI6 340 aa22.24■■□□□ 1.15
UPK3B-203ENST00000394849 SPDYE4A6NLX3 237 aa22.23■■□□□ 1.15
UPK3B-203ENST00000394849 SFPQP23246 707 aaKnown RBP eCLIP22.23■■□□□ 1.15
UPK3B-203ENST00000394849 SFNP31947 248 aa22.23■■□□□ 1.15
UPK3B-203ENST00000394849 CIITAP33076 1130 aa22.23■■□□□ 1.15
UPK3B-203ENST00000394849 PHKA2P46019 1235 aa22.23■■□□□ 1.15
UPK3B-203ENST00000394849 COL9A3Q14050 684 aaPredicted RBP22.23■■□□□ 1.15
UPK3B-203ENST00000394849 PFKFB3Q16875 520 aaPredicted RBP22.23■■□□□ 1.15
UPK3B-203ENST00000394849 ERICH6BQ5W0A0 696 aa22.23■■□□□ 1.15
UPK3B-203ENST00000394849 TMC5Q6UXY8 1006 aa22.23■■□□□ 1.15
UPK3B-203ENST00000394849 C15orf39Q6ZRI6 1047 aa22.23■■□□□ 1.15
UPK3B-203ENST00000394849 REXO1Q8N1G1 1221 aaKnown RBP22.23■■□□□ 1.15
UPK3B-203ENST00000394849 DISC1Q9NRI5 854 aa22.23■■□□□ 1.15
UPK3B-203ENST00000394849 FBXL21Q9UKT6 434 aa22.23■■□□□ 1.15
UPK3B-203ENST00000394849 CCDC196A0A1B0GTZ2 297 aa22.22■■□□□ 1.15
UPK3B-203ENST00000394849 GNA11P29992 359 aa22.22■■□□□ 1.15
UPK3B-203ENST00000394849 DNM2P50570 870 aa22.22■■□□□ 1.15
UPK3B-203ENST00000394849 RAB27AP51159 221 aa22.22■■□□□ 1.15
UPK3B-203ENST00000394849 RNASELQ05823 741 aaKnown RBP22.22■■□□□ 1.15
UPK3B-203ENST00000394849 NONOQ15233 471 aaKnown RBP eCLIP22.22■■□□□ 1.15
UPK3B-203ENST00000394849 ANGPT1Q15389 498 aa22.22■■□□□ 1.15
UPK3B-203ENST00000394849 PRR16Q569H4 304 aa22.22■■□□□ 1.15
UPK3B-203ENST00000394849 ELMSAN1Q6PJG2 1045 aa22.22■■□□□ 1.15
UPK3B-203ENST00000394849 SKAP1Q86WV1 359 aa22.22■■□□□ 1.15
UPK3B-203ENST00000394849 DTWD2Q8NBA8 298 aa22.22■■□□□ 1.15
UPK3B-203ENST00000394849 GOLGA8AA7E2F4 631 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 GOLGA8BA8MQT2 603 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 ZNF623O75123 536 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 GALTP07902 379 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 NPR3P17342 541 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 PRKCEQ02156 737 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 NOMO2Q5JPE7 1267 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 TWF2Q6IBS0 349 aaKnown RBP22.21■■□□□ 1.15
UPK3B-203ENST00000394849 CYP26C1Q6V0L0 522 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 DHX32Q7L7V1 743 aaKnown RBP22.21■■□□□ 1.15
UPK3B-203ENST00000394849 BICD2Q8TD16 824 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 AUTS2Q8WXX7 1259 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 RIT2Q99578 217 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 KCNK12Q9HB15 430 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 TBC1D13Q9NVG8 400 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 PPP4R2Q9NY27 417 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 DPP7Q9UHL4 492 aa22.21■■□□□ 1.15
UPK3B-203ENST00000394849 EP300Q09472 2414 aaPredicted RBP22.2■■□□□ 1.14
UPK3B-203ENST00000394849 ZNF862O60290 1169 aa22.2■■□□□ 1.14
UPK3B-203ENST00000394849 JAK3P52333 1124 aa22.2■■□□□ 1.14
UPK3B-203ENST00000394849 EXOSC10Q01780 885 aaKnown RBP22.2■■□□□ 1.14
UPK3B-203ENST00000394849 PTPN14Q15678 1187 aa22.2■■□□□ 1.14
UPK3B-203ENST00000394849 LETM2Q2VYF4 491 aa22.2■■□□□ 1.14
UPK3B-203ENST00000394849 KANK3Q6NY19 840 aa22.2■■□□□ 1.14
UPK3B-203ENST00000394849 ZNF410Q86VK4 478 aa22.2■■□□□ 1.14
UPK3B-203ENST00000394849 TMEM173Q86WV6 379 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms