RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 TUFT1Q9NNX1 390 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 GTPBP10A4D1E9 387 aaKnown RBP16.88■□□□□ 0.29
PTBP1-204ENST00000394601 GOLGA8KD6RF30 607 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 CLIC2O15247 247 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 CALUO43852 315 aaPredicted RBP16.88■□□□□ 0.29
PTBP1-204ENST00000394601 SHOX2O60902 331 aaPredicted RBP16.88■□□□□ 0.29
PTBP1-204ENST00000394601 LGR5O75473 907 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 VIL1P09327 827 aaKnown RBP16.88■□□□□ 0.29
PTBP1-204ENST00000394601 NMT1P30419 496 aaKnown RBP16.88■□□□□ 0.29
PTBP1-204ENST00000394601 PAFAH1B1P43034 410 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 CYB5D1Q6P9G0 228 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 SLC30A5Q8TAD4 765 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 DYDC2Q96IM9 177 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 DMAC2Q9NW81 257 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 ZNF219Q9P2Y4 722 aaPredicted RBP16.88■□□□□ 0.29
PTBP1-204ENST00000394601 RNF14Q9UBS8 474 aa16.88■□□□□ 0.29
PTBP1-204ENST00000394601 SPDYE2BA6NHP3 402 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 H0YIN7 160 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 EIF3DO15371 548 aaKnown RBP eCLIP16.87■□□□□ 0.29
PTBP1-204ENST00000394601 AP1G2O75843 785 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 SPDYE6P0CI01 402 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 XRCC5P13010 732 aaKnown RBP16.87■□□□□ 0.29
PTBP1-204ENST00000394601 GLE1Q53GS7 698 aaKnown RBP16.87■□□□□ 0.29
PTBP1-204ENST00000394601 SLFN11Q7Z7L1 901 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 FLAD1Q8NFF5 587 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 HERC5Q9UII4 1024 aaKnown RBP16.87■□□□□ 0.29
PTBP1-204ENST00000394601 STXBP5LQ9Y2K9 1186 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 ZBTB12Q9Y330 459 aaPredicted RBP16.87■□□□□ 0.29
PTBP1-204ENST00000394601 FRMPD4Q14CM0 1322 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 PHF20L1A8MW92 1017 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 SNX1Q13596 522 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 CFAP221Q4G0U5 840 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 CC2D2BQ6DHV5 1058 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 PIK3R5Q8WYR1 880 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 TRIM31Q9BZY9 425 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 CCDC113Q9H0I3 377 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 GOLPH3Q9H4A6 298 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 TPX2Q9ULW0 747 aaKnown RBP16.87■□□□□ 0.29
PTBP1-204ENST00000394601 GCNT3O95395 438 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 FNTAP49354 379 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 EGFL6Q8IUX8 553 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 DEFB129Q9H1M3 183 aa16.87■□□□□ 0.29
PTBP1-204ENST00000394601 DDX3XO00571 662 aaKnown RBP eCLIP16.86■□□□□ 0.295e-19■■■■□ 22.3
PTBP1-204ENST00000394601 CES2O00748 559 aa16.86■□□□□ 0.29
PTBP1-204ENST00000394601 PPP1R37O75864 691 aa16.86■□□□□ 0.29
PTBP1-204ENST00000394601 APBA3O96018 575 aa16.86■□□□□ 0.29
PTBP1-204ENST00000394601 ECHS1P30084 290 aa16.86■□□□□ 0.29
PTBP1-204ENST00000394601 MAPK7Q13164 816 aa16.86■□□□□ 0.29
PTBP1-204ENST00000394601 FAM133BQ5BKY9 247 aaKnown RBP16.86■□□□□ 0.29
PTBP1-204ENST00000394601 ZNF720Q7Z2F6 126 aa16.86■□□□□ 0.29
PTBP1-204ENST00000394601 TBC1D1Q86TI0 1168 aaPredicted RBP16.86■□□□□ 0.29
PTBP1-204ENST00000394601 DAW1Q8N136 415 aa16.86■□□□□ 0.29
PTBP1-204ENST00000394601 UHMK1Q8TAS1 419 aaKnown RBP16.86■□□□□ 0.29
PTBP1-204ENST00000394601 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.86■□□□□ 0.29
PTBP1-204ENST00000394601 MCM8Q9UJA3 840 aa16.86■□□□□ 0.29
PTBP1-204ENST00000394601 TLDC2A0PJX2 215 aa16.86■□□□□ 0.29
PTBP1-204ENST00000394601 ARP10275 920 aa16.86■□□□□ 0.29
PTBP1-204ENST00000394601 C10orf76Q5T2E6 689 aa16.86■□□□□ 0.29
PTBP1-204ENST00000394601 TAX1BP1Q86VP1 789 aa16.86■□□□□ 0.29
PTBP1-204ENST00000394601 MYCBPAPQ8TBZ2 947 aa16.86■□□□□ 0.29
PTBP1-204ENST00000394601 TMX4Q9H1E5 349 aaPredicted RBP16.86■□□□□ 0.29
PTBP1-204ENST00000394601 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.86■□□□□ 0.29
PTBP1-204ENST00000394601 PPP1R12AO14974 1030 aaPredicted RBP16.85■□□□□ 0.29
PTBP1-204ENST00000394601 EPHB4P54760 987 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 CHADLQ6NUI6 762 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 EMBQ6PCB8 327 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 USP38Q8NB14 1042 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 STAMBPL1Q96FJ0 436 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 KRT12Q99456 494 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 UNC45AQ9H3U1 944 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 PLA2G6O60733 806 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 HEXIM1O94992 359 aaKnown RBP16.85■□□□□ 0.29
PTBP1-204ENST00000394601 EPB41P11171 864 aaKnown RBP16.85■□□□□ 0.29
PTBP1-204ENST00000394601 GAP43P17677 238 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 IKQ13123 557 aaPredicted RBP16.85■□□□□ 0.29
PTBP1-204ENST00000394601 TRIM68Q6AZZ1 485 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 LNX1Q8TBB1 728 aaPredicted RBP16.85■□□□□ 0.29
PTBP1-204ENST00000394601 FAXDC2Q96IV6 333 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 LBHD1Q9BQE6 289 aaPredicted RBP16.85■□□□□ 0.29
PTBP1-204ENST00000394601 GLIS2Q9BZE0 524 aaPredicted RBP16.85■□□□□ 0.29
PTBP1-204ENST00000394601 METTL14Q9HCE5 456 aaKnown RBP16.85■□□□□ 0.29
PTBP1-204ENST00000394601 GCNT4Q9P109 453 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 ZBTB21Q9ULJ3 1066 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 BZW2Q9Y6E2 419 aaKnown RBP16.85■□□□□ 0.29
PTBP1-204ENST00000394601 UBXN2AP68543 259 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 CBWD6Q4V339 395 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 DCAF17Q5H9S7 520 aaPredicted RBP16.85■□□□□ 0.29
PTBP1-204ENST00000394601 CBWD3Q5JTY5 395 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 CBWD5Q5RIA9 395 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 DDX42Q86XP3 938 aaKnown RBP eCLIP16.85■□□□□ 0.292e-6■□□□□ 10.6
PTBP1-204ENST00000394601 SCFD2Q8WU76 684 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 UBLCP1Q8WVY7 318 aaPredicted RBP16.85■□□□□ 0.29
PTBP1-204ENST00000394601 STK38LQ9Y2H1 464 aa16.85■□□□□ 0.29
PTBP1-204ENST00000394601 TCP10L2B9ZVM9 353 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 CFBP00751 764 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 HMGB2P26583 209 aaKnown RBP16.84■□□□□ 0.29
PTBP1-204ENST00000394601 QPCTQ16769 361 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 CEP55Q53EZ4 464 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 TPH2Q8IWU9 490 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 IQCKQ8N0W5 287 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms