RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 MYH1P12882 1939 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 MYH2Q9UKX2 1941 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 MYH4Q9Y623 1939 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 PLEKHG3A1L390 1219 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 GGCXP38435 758 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 FKBP3Q00688 224 aaKnown RBP14.22□□□□□ -0.13
USP49-203ENST00000394253 TTC33Q6PID6 262 aaPredicted RBP14.22□□□□□ -0.13
USP49-203ENST00000394253 DHX36Q9H2U1 1008 aaKnown RBP14.22□□□□□ -0.13
USP49-203ENST00000394253 FKBP14Q9NWM8 211 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 TNNQ9UQP3 1299 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 PCDHB15Q9Y5E8 787 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 RP1P56715 2156 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 ALBP02768 609 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 HPCAP84074 193 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 P3H2Q8IVL5 708 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 FNDC3AQ9Y2H6 1198 aaKnown RBP14.21□□□□□ -0.13
USP49-203ENST00000394253 SYNDIG1LA6NDD5 238 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 KRT40Q6A162 431 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 NLRP14Q86W24 1093 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 ZNF713Q8N859 430 aaPredicted RBP14.21□□□□□ -0.13
USP49-203ENST00000394253 DNAJC9Q8WXX5 260 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 IARS2Q9NSE4 1012 aaKnown RBP14.21□□□□□ -0.13
USP49-203ENST00000394253 CHMP2BQ9UQN3 213 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 CFAP69A5D8W1 941 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 IKBKBO14920 756 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 ACADSP16219 412 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 CYP4A11Q02928 519 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 CYP4A22Q5TCH4 519 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 LINS1Q8NG48 757 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 THOC1Q96FV9 657 aaKnown RBP14.21□□□□□ -0.13
USP49-203ENST00000394253 CATSPER2Q96P56 530 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 SAP30BPQ9UHR5 308 aaKnown RBP14.21□□□□□ -0.13
USP49-203ENST00000394253 PIPSLA2A3N6 862 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 TAF8Q7Z7C8 310 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 CCDC195A0A1B0GUA6 201 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 TAF4O00268 1085 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 TECP42680 631 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 ATN1P54259 1190 aaPredicted RBP14.21□□□□□ -0.13
USP49-203ENST00000394253 PURAQ00577 322 aaKnown RBP14.21□□□□□ -0.13
USP49-203ENST00000394253 C1DQ13901 141 aaKnown RBP14.21□□□□□ -0.13
USP49-203ENST00000394253 TTC23LQ6PF05 361 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 FAM149B1Q96BN6 582 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 EPN3Q9H201 632 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 ING3Q9NXR8 418 aa14.21□□□□□ -0.13
USP49-203ENST00000394253 TOM1O60784 492 aa14.21□□□□□ -0.14
USP49-203ENST00000394253 CCT3P49368 545 aaKnown RBP14.21□□□□□ -0.14
USP49-203ENST00000394253 NAALADL2Q58DX5 795 aa14.21□□□□□ -0.14
USP49-203ENST00000394253 TRIM51Q9BSJ1 452 aa14.21□□□□□ -0.14
USP49-203ENST00000394253 CASS4Q9NQ75 786 aa14.21□□□□□ -0.14
USP49-203ENST00000394253 PRPF4O43172 522 aaKnown RBP eCLIP14.21□□□□□ -0.14
USP49-203ENST00000394253 FGGP02679 453 aa14.21□□□□□ -0.14
USP49-203ENST00000394253 GSPT1P15170 499 aaKnown RBP14.21□□□□□ -0.14
USP49-203ENST00000394253 SESN2P58004 480 aaPredicted RBP14.21□□□□□ -0.14
USP49-203ENST00000394253 TFCP2Q12800 502 aa14.21□□□□□ -0.14
USP49-203ENST00000394253 PSTPIP2Q9H939 334 aa14.21□□□□□ -0.14
USP49-203ENST00000394253 EXOSC4Q9NPD3 245 aaKnown RBP14.21□□□□□ -0.14
USP49-203ENST00000394253 PNMA8CA0A1B0GUJ8 204 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 ABCB1P08183 1280 aaPredicted RBP14.2□□□□□ -0.14
USP49-203ENST00000394253 FAM69CQ0P6D2 419 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 XKR9Q5GH70 373 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 APOL4Q9BPW4 351 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 COBLO75128 1261 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 GLMNQ92990 594 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 IFT43Q96FT9 208 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 VPS54Q9P1Q0 977 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 MIF4GDA9UHW6 222 aaKnown RBP14.2□□□□□ -0.14
USP49-203ENST00000394253 PKN2Q16513 984 aaKnown RBP14.2□□□□□ -0.14
USP49-203ENST00000394253 FBXO38Q6PIJ6 1188 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 PSD3Q9NYI0 1048 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 TMA7Q9Y2S6 64 aaKnown RBP14.2□□□□□ -0.14
USP49-203ENST00000394253 SURF1Q15526 300 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 CCDC80Q76M96 950 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 MAD2L2Q9UI95 211 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 UHRF1BP1Q6BDS2 1440 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 AP3B1O00203 1094 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 KPNA4O00629 521 aaPredicted RBP14.2□□□□□ -0.14
USP49-203ENST00000394253 BLIDQ8IZY5 108 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 ATP11CQ8NB49 1132 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 GPR101Q96P66 508 aaPredicted RBP14.2□□□□□ -0.14
USP49-203ENST00000394253 PCDHA13Q9Y5I0 950 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 CECR2Q9BXF3 1484 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 PSMA2P25787 234 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 YWHABP31946 246 aaKnown RBP14.2□□□□□ -0.14
USP49-203ENST00000394253 PRAMEP78395 509 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 ARMC4Q5T2S8 1044 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 KLHL17Q6TDP4 642 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 TMEM206Q9H813 350 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 KLHL8Q9P2G9 620 aaPredicted RBP14.2□□□□□ -0.14
USP49-203ENST00000394253 PITPNM2Q9BZ72 1349 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 SPDYE5A6NIY4 337 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 UBAP1LF5GYI3 381 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 CDC37Q16543 378 aaPredicted RBP14.2□□□□□ -0.14
USP49-203ENST00000394253 SPDYE7PQ495Y7 208 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 PKN3Q6P5Z2 889 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 USP33Q8TEY7 942 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 SERHL2Q9H4I8 314 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 SERHLQ9NQF3 203 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 DKK3Q9UBP4 350 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 ZMYM6O95789 1325 aa14.2□□□□□ -0.14
USP49-203ENST00000394253 ALCAMQ13740 583 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms