RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CATSPER4Q7RTX7 472 aa34.25■■■■□ 3.07
CMTM4-202ENST00000394106 ELAC1Q9H777 363 aaKnown RBP34.25■■■■□ 3.07
CMTM4-202ENST00000394106 IFT122Q9HBG6 1241 aa34.25■■■■□ 3.07
CMTM4-202ENST00000394106 THEGQ9P2T0 379 aa34.25■■■■□ 3.07
CMTM4-202ENST00000394106 KIAA1671Q9BY89 1806 aa34.25■■■■□ 3.07
CMTM4-202ENST00000394106 DGAT1O75907 488 aa34.24■■■■□ 3.07
CMTM4-202ENST00000394106 FXR2P51116 673 aaKnown RBP eCLIP34.24■■■■□ 3.07
CMTM4-202ENST00000394106 CUL4AQ13619 759 aa34.24■■■■□ 3.07
CMTM4-202ENST00000394106 PTPROQ16827 1216 aa34.24■■■■□ 3.07
CMTM4-202ENST00000394106 POTEGQ6S5H5 508 aa34.24■■■■□ 3.07
CMTM4-202ENST00000394106 FERMT3Q86UX7 667 aa34.24■■■■□ 3.07
CMTM4-202ENST00000394106 RNF169Q8NCN4 708 aa34.24■■■■□ 3.07
CMTM4-202ENST00000394106 C11orf84Q9BUA3 381 aaPredicted RBP34.24■■■■□ 3.07
CMTM4-202ENST00000394106 FNDC1Q4ZHG4 1894 aaPredicted RBP34.24■■■■□ 3.07
CMTM4-202ENST00000394106 A0A0C4DFX4 3053 aa34.24■■■■□ 3.07
CMTM4-202ENST00000394106 RB1P06400 928 aa34.23■■■■□ 3.07
CMTM4-202ENST00000394106 XRCC6P12956 609 aaKnown RBP eCLIP34.23■■■■□ 3.07
CMTM4-202ENST00000394106 RILPL1Q5EBL4 403 aa34.23■■■■□ 3.07
CMTM4-202ENST00000394106 ECHDC2Q86YB7 292 aa34.23■■■■□ 3.07
CMTM4-202ENST00000394106 RNF149Q8NC42 400 aa34.23■■■■□ 3.07
CMTM4-202ENST00000394106 NACC1Q96RE7 527 aa34.23■■■■□ 3.07
CMTM4-202ENST00000394106 EIF4ENIF1Q9NRA8 985 aaKnown RBP34.23■■■■□ 3.07
CMTM4-202ENST00000394106 DACT1Q9NYF0 836 aa34.23■■■■□ 3.07
CMTM4-202ENST00000394106 LRWD1Q9UFC0 647 aa34.23■■■■□ 3.07
CMTM4-202ENST00000394106 PIN4Q9Y237 131 aaKnown RBP34.23■■■■□ 3.07
CMTM4-202ENST00000394106 UNC80Q8N2C7 3258 aa34.22■■■■□ 3.07
CMTM4-202ENST00000394106 C5orf67F2Z3F1 127 aa34.22■■■■□ 3.07
CMTM4-202ENST00000394106 ASAP2O43150 1006 aa34.22■■■■□ 3.07
CMTM4-202ENST00000394106 USO1O60763 962 aaKnown RBP34.22■■■■□ 3.07
CMTM4-202ENST00000394106 RPA1P27694 616 aa34.22■■■■□ 3.07
CMTM4-202ENST00000394106 HAUS3Q68CZ6 603 aa34.22■■■■□ 3.07
CMTM4-202ENST00000394106 MRPL38Q96DV4 380 aaKnown RBP34.22■■■■□ 3.07
CMTM4-202ENST00000394106 CHST12Q9NRB3 414 aa34.22■■■■□ 3.07
CMTM4-202ENST00000394106 CCT6AP40227 531 aaKnown RBP34.21■■■■□ 3.07
CMTM4-202ENST00000394106 SPOUT1Q5T280 376 aaKnown RBP34.21■■■■□ 3.07
CMTM4-202ENST00000394106 LAD1O00515 517 aa34.2■■■■□ 3.07
CMTM4-202ENST00000394106 MXD4Q14582 209 aaPredicted RBP34.2■■■■□ 3.07
CMTM4-202ENST00000394106 TWF2Q6IBS0 349 aaKnown RBP34.2■■■■□ 3.07
CMTM4-202ENST00000394106 SRGAP1Q7Z6B7 1085 aa34.2■■■■□ 3.07
CMTM4-202ENST00000394106 RAB34Q9BZG1 259 aa34.2■■■■□ 3.07
CMTM4-202ENST00000394106 MINDY3Q9H8M7 445 aa34.2■■■■□ 3.07
CMTM4-202ENST00000394106 DBR1Q9UK59 544 aaKnown RBP34.2■■■■□ 3.07
CMTM4-202ENST00000394106 A0A0U1RQF3 1178 aa34.19■■■■□ 3.06
CMTM4-202ENST00000394106 PHKA2P46019 1235 aa34.19■■■■□ 3.06
CMTM4-202ENST00000394106 MAEAQ7L5Y9 396 aa34.19■■■■□ 3.06
CMTM4-202ENST00000394106 ASAP3Q8TDY4 903 aa34.19■■■■□ 3.06
CMTM4-202ENST00000394106 PLVAPQ9BX97 442 aa34.19■■■■□ 3.06
CMTM4-202ENST00000394106 GRM6O15303 877 aa34.18■■■■□ 3.06
CMTM4-202ENST00000394106 HOXA2O43364 376 aa34.18■■■■□ 3.06
CMTM4-202ENST00000394106 TFDP1Q14186 410 aa34.18■■■■□ 3.06
CMTM4-202ENST00000394106 PDIA5Q14554 519 aa34.18■■■■□ 3.06
CMTM4-202ENST00000394106 ABI1Q8IZP0 508 aa34.18■■■■□ 3.06
CMTM4-202ENST00000394106 TMEM117Q9H0C3 514 aa34.18■■■■□ 3.06
CMTM4-202ENST00000394106 POLR3FQ9H1D9 316 aaPredicted RBP34.18■■■■□ 3.06
CMTM4-202ENST00000394106 RNF19AQ9NV58 838 aa34.18■■■■□ 3.06
CMTM4-202ENST00000394106 HCSTQ9UBK5 93 aa34.18■■■■□ 3.06
CMTM4-202ENST00000394106 REV3LO60673 3130 aa34.18■■■■□ 3.06
CMTM4-202ENST00000394106 CSPG5O95196 566 aa34.17■■■■□ 3.06
CMTM4-202ENST00000394106 ARL2P36404 184 aa34.17■■■■□ 3.06
CMTM4-202ENST00000394106 PRPHP41219 470 aa34.17■■■■□ 3.06
CMTM4-202ENST00000394106 IL17AQ16552 155 aa34.17■■■■□ 3.06
CMTM4-202ENST00000394106 DTHD1Q6ZMT9 781 aa34.17■■■■□ 3.06
CMTM4-202ENST00000394106 IGSF22Q8N9C0 903 aa34.17■■■■□ 3.06
CMTM4-202ENST00000394106 SNX29Q8TEQ0 813 aa34.17■■■■□ 3.06
CMTM4-202ENST00000394106 ATXN2LQ8WWM7 1075 aaKnown RBP34.17■■■■□ 3.06
CMTM4-202ENST00000394106 ALG13Q9NP73 1137 aaKnown RBP34.17■■■■□ 3.06
CMTM4-202ENST00000394106 AGPAT5Q9NUQ2 364 aa34.17■■■■□ 3.06
CMTM4-202ENST00000394106 VPS37CA5D8V6 355 aaPredicted RBP34.16■■■■□ 3.06
CMTM4-202ENST00000394106 ARHGEF35A5YM69 484 aa34.16■■■■□ 3.06
CMTM4-202ENST00000394106 DLL1O00548 723 aa34.16■■■■□ 3.06
CMTM4-202ENST00000394106 CAPSQ13938 189 aa34.16■■■■□ 3.06
CMTM4-202ENST00000394106 ECM1Q16610 540 aa34.16■■■■□ 3.06
CMTM4-202ENST00000394106 CASD1Q96PB1 797 aa34.16■■■■□ 3.06
CMTM4-202ENST00000394106 GPRC5CQ9NQ84 441 aa34.16■■■■□ 3.06
CMTM4-202ENST00000394106 TYW1Q9NV66 732 aaKnown RBP34.16■■■■□ 3.06
CMTM4-202ENST00000394106 PP2D1A8MPX8 630 aa34.15■■■■□ 3.06
CMTM4-202ENST00000394106 EOMESO95936 686 aa34.15■■■■□ 3.06
CMTM4-202ENST00000394106 ATF7P17544 494 aaPredicted RBP34.15■■■■□ 3.06
CMTM4-202ENST00000394106 MUTP22033 750 aa34.15■■■■□ 3.06
CMTM4-202ENST00000394106 GLRA2P23416 452 aa34.15■■■■□ 3.06
CMTM4-202ENST00000394106 TIGD5Q53EQ6 642 aa34.15■■■■□ 3.06
CMTM4-202ENST00000394106 ZNF598Q86UK7 904 aaKnown RBP34.15■■■■□ 3.06
CMTM4-202ENST00000394106 KLHL23Q8NBE8 558 aa34.15■■■■□ 3.06
CMTM4-202ENST00000394106 P2RX5Q93086 422 aa34.15■■■■□ 3.06
CMTM4-202ENST00000394106 PLAGL2Q9UPG8 496 aa34.15■■■■□ 3.06
CMTM4-202ENST00000394106 KIAA1024Q9UPX6 916 aa34.15■■■■□ 3.06
CMTM4-202ENST00000394106 STK24Q9Y6E0 443 aa34.15■■■■□ 3.06
CMTM4-202ENST00000394106 PTENP60484 403 aa34.14■■■■□ 3.06
CMTM4-202ENST00000394106 MRPS5P82675 430 aaKnown RBP34.14■■■■□ 3.06
CMTM4-202ENST00000394106 ATP2C1P98194 919 aaPredicted RBP34.14■■■■□ 3.06
CMTM4-202ENST00000394106 TFF2Q03403 129 aa34.14■■■■□ 3.06
CMTM4-202ENST00000394106 LONRF3Q496Y0 759 aa34.14■■■■□ 3.06
CMTM4-202ENST00000394106 CLLU1OSQ5K130 101 aa34.14■■■■□ 3.06
CMTM4-202ENST00000394106 PADI6Q6TGC4 694 aa34.14■■■■□ 3.06
CMTM4-202ENST00000394106 MCPH1Q8NEM0 835 aa34.14■■■■□ 3.06
CMTM4-202ENST00000394106 HELQQ8TDG4 1101 aa34.14■■■■□ 3.06
CMTM4-202ENST00000394106 LMAN2LQ9H0V9 348 aa34.14■■■■□ 3.06
CMTM4-202ENST00000394106 AAASQ9NRG9 546 aa34.14■■■■□ 3.06
CMTM4-202ENST00000394106 PCDHB12Q9Y5F1 795 aa34.14■■■■□ 3.06
CMTM4-202ENST00000394106 INO80B-WBP1J3KQ70 363 aa34.13■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms