RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 PBKQ96KB5 322 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 TEPSINQ96N21 525 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 SELENOOQ9BVL4 669 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 STRA6Q9BX79 667 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 STK33Q9BYT3 514 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 INTS2Q9H0H0 1204 aaKnown RBP7.83□□□□□ -1.16
SMAD1-202ENST00000394092 RAVER2Q9HCJ3 691 aaKnown RBP7.83□□□□□ -1.16
SMAD1-202ENST00000394092 APEX2Q9UBZ4 518 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 SALL4Q9UJQ4 1053 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 ZHX2Q9Y6X8 837 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 LTBP3Q9NS15 1303 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 H3BQF6 201 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 MAFGO15525 162 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 DHX15O43143 795 aaKnown RBP7.83□□□□□ -1.16
SMAD1-202ENST00000394092 CCND2P30279 289 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 YWHABP31946 246 aaKnown RBP7.83□□□□□ -1.16
SMAD1-202ENST00000394092 CYP2C19P33261 490 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 NOP2P46087 812 aaKnown RBP7.83□□□□□ -1.16
SMAD1-202ENST00000394092 SMTNP53814 917 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 RPS6P62753 249 aaKnown RBP7.83□□□□□ -1.16
SMAD1-202ENST00000394092 APBA1Q02410 837 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 NNTQ13423 1086 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 MTMR2Q13614 643 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 RPS6KA1Q15418 735 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 ARHGEF16Q5VV41 709 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 CCNI2Q6ZMN8 369 aaPredicted RBP7.83□□□□□ -1.16
SMAD1-202ENST00000394092 USP37Q86T82 979 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 NLRX1Q86UT6 975 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 APOBEC3FQ8IUX4 373 aaKnown RBP7.83□□□□□ -1.16
SMAD1-202ENST00000394092 GPIHBP1Q8IV16 184 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 IFT20Q8IY31 132 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 SCYL3Q8IZE3 742 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
SMAD1-202ENST00000394092 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.83□□□□□ -1.16
SMAD1-202ENST00000394092 GPRASP2Q96D09 838 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 CDHR1Q96JP9 859 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 TRERF1Q96PN7 1200 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 RPAP3Q9H6T3 665 aaPredicted RBP7.83□□□□□ -1.16
SMAD1-202ENST00000394092 PXMP2Q9NR77 195 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 ANKEF1Q9NU02 776 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 COL20A1Q9P218 1284 aa7.83□□□□□ -1.16
SMAD1-202ENST00000394092 WRAP73Q9P2S5 460 aaPredicted RBP7.83□□□□□ -1.16
SMAD1-202ENST00000394092 NCANO14594 1321 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 RLFQ13129 1914 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 LRRIQ3A6PVS8 624 aaPredicted RBP7.82□□□□□ -1.16
SMAD1-202ENST00000394092 ZBTB39O15060 712 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 PMM2O15305 246 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 NCK2O43639 380 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 EVI5O60447 810 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 STAM2O75886 525 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 FTCDO95954 541 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 EIF2AK2P19525 551 aaKnown RBP7.82□□□□□ -1.16
SMAD1-202ENST00000394092 CXCR5P32302 372 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 NCKAP1LP55160 1127 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 MRPS9P82933 396 aaKnown RBP7.82□□□□□ -1.16
SMAD1-202ENST00000394092 GTF2BQ00403 316 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 PAK2Q13177 524 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 ITGB3BPQ13352 177 aaPredicted RBP7.82□□□□□ -1.16
SMAD1-202ENST00000394092 CLUL1Q15846 466 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 MUM1L1Q5H9M0 696 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 ZNF746Q6NUN9 644 aaPredicted RBP7.82□□□□□ -1.16
SMAD1-202ENST00000394092 POTEAQ6S8J7 498 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 OTUD6AQ7L8S5 288 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 DAW1Q8N136 415 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 XXYLT1Q8NBI6 393 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 IL31RAQ8NI17 732 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 AENQ8WTP8 325 aaKnown RBP7.82□□□□□ -1.16
SMAD1-202ENST00000394092 MARVELD3Q96A59 401 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 RUFY1Q96T51 708 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 RMDN3Q96TC7 470 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 PSMB7Q99436 277 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 PDCD2LQ9BRP1 358 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 C17orf75Q9HAS0 396 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 PICK1Q9NRD5 415 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 HOMER2Q9NSB8 354 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 RNF146Q9NTX7 359 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.82□□□□□ -1.16
SMAD1-202ENST00000394092 PKD2L1Q9P0L9 805 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 VPS18Q9P253 973 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 DNAJC12Q9UKB3 198 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 PRDM4Q9UKN5 801 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 HPCAL4Q9UM19 191 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 NENFQ9UMX5 172 aa7.82□□□□□ -1.16
SMAD1-202ENST00000394092 ASTN2O75129 1339 aaPredicted RBP7.82□□□□□ -1.16
SMAD1-202ENST00000394092 GOLGA6BA6NDN3 693 aa7.81□□□□□ -1.16
SMAD1-202ENST00000394092 C19orf81C9J6K1 198 aa7.81□□□□□ -1.16
SMAD1-202ENST00000394092 H0YCG3 227 aa7.81□□□□□ -1.16
SMAD1-202ENST00000394092 CCDC188H7C350 402 aa7.81□□□□□ -1.16
SMAD1-202ENST00000394092 VWA5AO00534 786 aa7.81□□□□□ -1.16
SMAD1-202ENST00000394092 KIF4AO95239 1232 aa7.81□□□□□ -1.16
SMAD1-202ENST00000394092 TMEM253P0C7T8 217 aa7.81□□□□□ -1.16
SMAD1-202ENST00000394092 MYCLP12524 364 aaPredicted RBP7.81□□□□□ -1.16
SMAD1-202ENST00000394092 MATR3P43243 847 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMAD1-202ENST00000394092 VAMP7P51809 220 aa7.81□□□□□ -1.16
SMAD1-202ENST00000394092 BACE1P56817 501 aa7.81□□□□□ -1.16
SMAD1-202ENST00000394092 DMP1Q13316 513 aaPredicted RBP7.81□□□□□ -1.16
SMAD1-202ENST00000394092 COG2Q14746 738 aa7.81□□□□□ -1.16
SMAD1-202ENST00000394092 DRAP1Q14919 205 aaPredicted RBP7.81□□□□□ -1.16
SMAD1-202ENST00000394092 NSMFQ6X4W1 530 aa7.81□□□□□ -1.16
SMAD1-202ENST00000394092 SLC30A10Q6XR72 485 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms