RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 SOX5P35711 763 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 LIG3P49916 1009 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 TTLL4Q14679 1199 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 TMED2Q15363 201 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 ZNF699Q32M78 642 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 EDRF1Q3B7T1 1238 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 TACC3Q9Y6A5 838 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 A0A0G2JLW4 131 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 FXR2P51116 673 aaKnown RBP eCLIP13.55□□□□□ -0.242e-8■■■■■ 27.5
CLTC-202ENST00000393043 HDLBPQ00341 1268 aaKnown RBP13.55□□□□□ -0.24
CLTC-202ENST00000393043 LLGL1Q15334 1064 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 RPS6KA2Q15349 733 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 RPAP3Q9H6T3 665 aaPredicted RBP13.55□□□□□ -0.24
CLTC-202ENST00000393043 GOLGA8CPA6NN73 597 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 FGFR2P21802 821 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 ZNF568Q3ZCX4 644 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 GPD1LQ8N335 351 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 FAM151AQ8WW52 585 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 RFFLQ8WZ73 363 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 RUBCNQ92622 972 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.55□□□□□ -0.241e-10■■□□□ 12.3
CLTC-202ENST00000393043 DDX23Q9BUQ8 820 aaKnown RBP13.55□□□□□ -0.24
CLTC-202ENST00000393043 POLR3FQ9H1D9 316 aaPredicted RBP13.55□□□□□ -0.24
CLTC-202ENST00000393043 KCNF1Q9H3M0 494 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 SLC12A6Q9UHW9 1150 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 MT-ND3P03897 115 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 TFDP2Q14188 446 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 STYK1Q6J9G0 422 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 TMEM270Q6UE05 265 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 MRPL4Q9BYD3 311 aaKnown RBP13.55□□□□□ -0.24
CLTC-202ENST00000393043 GPC3P51654 580 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 IFT88Q13099 833 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 KCNV1Q6PIU1 500 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 ZNF564Q8TBZ8 553 aaPredicted RBP13.55□□□□□ -0.24
CLTC-202ENST00000393043 ZBED1O96006 694 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 GNAT1P11488 350 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 CLNS1AP54105 237 aaKnown RBP13.54□□□□□ -0.24
CLTC-202ENST00000393043 E4F1Q66K89 784 aaPredicted RBP13.54□□□□□ -0.24
CLTC-202ENST00000393043 RASGRP2Q7LDG7 609 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 FBXL13Q8NEE6 735 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 SLC9A2Q9UBY0 812 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 CHRNA5P30532 468 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 USP49Q70CQ1 688 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 EFCAB13Q8IY85 973 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 WNT8AQ9H1J5 351 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 SLITRK6Q9H5Y7 841 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 GOLGA8QA0A0J9YX86 632 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 TARSL2A2RTX5 802 aaKnown RBP13.54□□□□□ -0.24
CLTC-202ENST00000393043 GOLGA8OA6NCC3 632 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 GOLGA8NF8WBI6 632 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 FTLP02792 175 aaPredicted RBP13.54□□□□□ -0.24
CLTC-202ENST00000393043 CHRNA3P32297 505 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 ECE1P42892 770 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 TRIP13Q15645 432 aaPredicted RBP13.54□□□□□ -0.24
CLTC-202ENST00000393043 TKFCQ3LXA3 575 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 VCPKMTQ9H867 229 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 JMJD4Q9H9V9 463 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 PRR12Q9ULL5 1215 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 PLAAQ9Y263 795 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 RIMS1Q86UR5 1692 aaKnown RBP13.54□□□□□ -0.24
CLTC-202ENST00000393043 EMSYQ7Z589 1322 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 ARHGAP42A6NI28 874 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 YWHABP31946 246 aaKnown RBP13.54□□□□□ -0.24
CLTC-202ENST00000393043 ASPHQ12797 758 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 ARL13BQ3SXY8 428 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 NFRKBQ6P4R8 1299 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 POLD4Q9HCU8 107 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 RGL1Q9NZL6 768 aa13.54□□□□□ -0.24
CLTC-202ENST00000393043 PITPNM2Q9BZ72 1349 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 MYMKA6NI61 221 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 GGPS1O95749 300 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 SLCO1A2P46721 670 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 EFNA5P52803 228 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 DNAAF3Q8N9W5 541 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 OR6B3Q8NGW1 331 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 PYROXD1Q8WU10 500 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 ASNSD1Q9NWL6 643 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 FAM187AA6NFU0 413 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 STK4Q13043 487 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 COG2Q14746 738 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 RSBN1LQ6PCB5 846 aaPredicted RBP13.53□□□□□ -0.24
CLTC-202ENST00000393043 PCGF5Q86SE9 256 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 FBXL16Q8N461 479 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 NUP85Q9BW27 656 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 PPP1R12CQ9BZL4 782 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 EFCC1Q9HA90 598 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 SNX24Q9Y343 169 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 MST1RQ04912 1400 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 C19orf81C9J6K1 198 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 Q3C1V9 767 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 BBS9Q3SYG4 887 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 RBM46Q8TBY0 533 aaKnown RBP13.53□□□□□ -0.24
CLTC-202ENST00000393043 FAM49AQ9H0Q0 323 aaPredicted RBP13.53□□□□□ -0.24
CLTC-202ENST00000393043 JPH1Q9HDC5 661 aaPredicted RBP13.53□□□□□ -0.24
CLTC-202ENST00000393043 ZNF70Q9UC06 446 aaPredicted RBP13.53□□□□□ -0.24
CLTC-202ENST00000393043 RRP15Q9Y3B9 282 aaKnown RBP13.53□□□□□ -0.24
CLTC-202ENST00000393043 UBE4BO95155 1302 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 DGAT1O75907 488 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 TRIM49P0CI25 452 aa13.53□□□□□ -0.24
CLTC-202ENST00000393043 TRIM49CP0CI26 452 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms