RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 MTCH2Q9Y6C9 303 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 STK24Q9Y6E0 443 aa13.19□□□□□ -0.3
RFC4-202ENST00000392481 BRWD1Q9NSI6 2320 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 K7ELQ4 463 aaPredicted RBP13.18□□□□□ -0.3
RFC4-202ENST00000392481 CSDE1O75534 798 aaKnown RBP13.18□□□□□ -0.3
RFC4-202ENST00000392481 FGFR4P22455 802 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 MXD4Q14582 209 aaPredicted RBP13.18□□□□□ -0.3
RFC4-202ENST00000392481 POTEGQ6S5H5 508 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 DTHD1Q6ZMT9 781 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 BRAPQ7Z569 592 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 FERMT3Q86UX7 667 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 GDPD5Q8WTR4 605 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 SNX21Q969T3 373 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 ELAC1Q9H777 363 aaKnown RBP13.18□□□□□ -0.3
RFC4-202ENST00000392481 ATP6V0A4Q9HBG4 840 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 CHST12Q9NRB3 414 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 TMEM161AQ9NX61 479 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 DACT1Q9NYF0 836 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 RWDD3Q9Y3V2 267 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 MYO7AQ13402 2215 aa13.18□□□□□ -0.3
RFC4-202ENST00000392481 RALGAPA2Q2PPJ7 1873 aa13.17□□□□□ -0.3
RFC4-202ENST00000392481 NLRC5Q86WI3 1866 aa13.17□□□□□ -0.3
RFC4-202ENST00000392481 A0A087WWV3 80 aa13.17□□□□□ -0.3
RFC4-202ENST00000392481 RB1P06400 928 aa13.17□□□□□ -0.3
RFC4-202ENST00000392481 LINC00271P0C7V0 271 aa13.17□□□□□ -0.3
RFC4-202ENST00000392481 SRGAP2CP0DJJ0 459 aa13.17□□□□□ -0.3
RFC4-202ENST00000392481 CCT6AP40227 531 aaKnown RBP13.17□□□□□ -0.3
RFC4-202ENST00000392481 ATP2C1P98194 919 aaPredicted RBP13.17□□□□□ -0.3
RFC4-202ENST00000392481 IL17AQ16552 155 aa13.17□□□□□ -0.3
RFC4-202ENST00000392481 SRGAP1Q7Z6B7 1085 aa13.17□□□□□ -0.3
RFC4-202ENST00000392481 COL4A4P53420 1690 aaPredicted RBP13.17□□□□□ -0.3
RFC4-202ENST00000392481 NCOR1O75376 2440 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 A0A0U1RQF3 1178 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 VPS37CA5D8V6 355 aaPredicted RBP13.16□□□□□ -0.3
RFC4-202ENST00000392481 C5orf67F2Z3F1 127 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 H3BNC9 293 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 USO1O60763 962 aaKnown RBP13.16□□□□□ -0.3
RFC4-202ENST00000392481 IBSPP21815 317 aaPredicted RBP13.16□□□□□ -0.3
RFC4-202ENST00000392481 ARL2P36404 184 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 BMPR1AP36894 532 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 PHKA2P46019 1235 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 POU5F1BQ06416 359 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 TFDP1Q14186 410 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 CCDC85BQ15834 202 aaPredicted RBP13.16□□□□□ -0.3
RFC4-202ENST00000392481 ARL6IP4Q66PJ3 421 aaKnown RBP13.16□□□□□ -0.3
RFC4-202ENST00000392481 CATSPER4Q7RTX7 472 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 ECHDC2Q86YB7 292 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.16□□□□□ -0.3
RFC4-202ENST00000392481 RNF149Q8NC42 400 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 PPM1EQ8WY54 764 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 TRAIPQ9BWF2 469 aa13.16□□□□□ -0.3
RFC4-202ENST00000392481 ARHGEF35A5YM69 484 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 HOXA2O43364 376 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 EOMESO95936 686 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 BMP15O95972 392 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 SYT1P21579 422 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 CTNNB1P35222 781 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 GATMP50440 423 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 PTENP60484 403 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 GPM6BQ13491 265 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 PCBP1Q15365 356 aaKnown RBP eCLIP13.15□□□□□ -0.3
RFC4-202ENST00000392481 ECM1Q16610 540 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 PAN2Q504Q3 1202 aaKnown RBP13.15□□□□□ -0.3
RFC4-202ENST00000392481 FAM102BQ5T8I3 360 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 KRT79Q5XKE5 535 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
RFC4-202ENST00000392481 MICALL1Q8N3F8 863 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 ASAP3Q8TDY4 903 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 SNX29Q8TEQ0 813 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 C11orf84Q9BUA3 381 aaPredicted RBP13.15□□□□□ -0.3
RFC4-202ENST00000392481 PLVAPQ9BX97 442 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 MINDY3Q9H8M7 445 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 AGPAT5Q9NUQ2 364 aa13.15□□□□□ -0.3
RFC4-202ENST00000392481 PIN4Q9Y237 131 aaKnown RBP13.15□□□□□ -0.3
RFC4-202ENST00000392481 MRPL42Q9Y6G3 142 aaKnown RBP13.15□□□□□ -0.3
RFC4-202ENST00000392481 FNDC1Q4ZHG4 1894 aaPredicted RBP13.15□□□□□ -0.3
RFC4-202ENST00000392481 TBKBP1A7MCY6 615 aa13.14□□□□□ -0.31
RFC4-202ENST00000392481 PP2D1A8MPX8 630 aa13.14□□□□□ -0.31
RFC4-202ENST00000392481 SKIP12755 728 aa13.14□□□□□ -0.31
RFC4-202ENST00000392481 CYP11B2P19099 503 aa13.14□□□□□ -0.31
RFC4-202ENST00000392481 GLRA2P23416 452 aa13.14□□□□□ -0.31
RFC4-202ENST00000392481 PTPROQ16827 1216 aa13.14□□□□□ -0.31
RFC4-202ENST00000392481 TWF2Q6IBS0 349 aaKnown RBP13.14□□□□□ -0.31
RFC4-202ENST00000392481 PADI6Q6TGC4 694 aa13.14□□□□□ -0.31
RFC4-202ENST00000392481 ZNF598Q86UK7 904 aaKnown RBP13.14□□□□□ -0.31
RFC4-202ENST00000392481 MRPL38Q96DV4 380 aaKnown RBP13.14□□□□□ -0.31
RFC4-202ENST00000392481 NFKBIZQ9BYH8 718 aa13.14□□□□□ -0.31
RFC4-202ENST00000392481 TMEM117Q9H0C3 514 aa13.14□□□□□ -0.31
RFC4-202ENST00000392481 POLR3FQ9H1D9 316 aaPredicted RBP13.14□□□□□ -0.31
RFC4-202ENST00000392481 KIAA1024Q9UPX6 916 aa13.14□□□□□ -0.31
RFC4-202ENST00000392481 ZNF623O75123 536 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 FGFR1P11362 822 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 CDC25AP30304 524 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 RAB27AP51159 221 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 CAPSQ13938 189 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 NAALADL2Q58DX5 795 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 HSCBQ8IWL3 235 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 P2RX5Q93086 422 aa13.13□□□□□ -0.31
RFC4-202ENST00000392481 MMTAG2Q9BU76 263 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms