RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 OTUD6AQ7L8S5 288 aa20.34■□□□□ 0.85
PPFIA1-202ENST00000389547 SFR1Q86XK3 245 aa20.34■□□□□ 0.85
PPFIA1-202ENST00000389547 LPAR1Q92633 364 aa20.34■□□□□ 0.85
PPFIA1-202ENST00000389547 VTI1AQ96AJ9 217 aa20.34■□□□□ 0.85
PPFIA1-202ENST00000389547 HOMER3Q9NSC5 361 aa20.34■□□□□ 0.85
PPFIA1-202ENST00000389547 STX2P32856 288 aa20.34■□□□□ 0.85
PPFIA1-202ENST00000389547 IGBP1P78318 339 aa20.34■□□□□ 0.85
PPFIA1-202ENST00000389547 ADCY1Q08828 1119 aa20.34■□□□□ 0.85
PPFIA1-202ENST00000389547 C6orf163Q5TEZ5 329 aa20.34■□□□□ 0.85
PPFIA1-202ENST00000389547 FUKQ8N0W3 1084 aa20.34■□□□□ 0.85
PPFIA1-202ENST00000389547 CHMP6Q96FZ7 201 aa20.34■□□□□ 0.85
PPFIA1-202ENST00000389547 RAB3IPQ96QF0 476 aaPredicted RBP20.34■□□□□ 0.85
PPFIA1-202ENST00000389547 L3MBTL1Q9Y468 752 aa20.34■□□□□ 0.85
PPFIA1-202ENST00000389547 TAF1P21675 1872 aa20.33■□□□□ 0.85
PPFIA1-202ENST00000389547 ASTN2O75129 1339 aaPredicted RBP20.33■□□□□ 0.85
PPFIA1-202ENST00000389547 PFDN1O60925 122 aa20.33■□□□□ 0.85
PPFIA1-202ENST00000389547 ARHGAP44Q17R89 818 aa20.33■□□□□ 0.85
PPFIA1-202ENST00000389547 EIF2AK1Q9BQI3 630 aaKnown RBP20.33■□□□□ 0.85
PPFIA1-202ENST00000389547 PACSIN2Q9UNF0 486 aaPredicted RBP20.33■□□□□ 0.85
PPFIA1-202ENST00000389547 MYMKA6NI61 221 aa20.33■□□□□ 0.84
PPFIA1-202ENST00000389547 LGALS16A8MUM7 142 aa20.33■□□□□ 0.84
PPFIA1-202ENST00000389547 CALCOCO2Q13137 446 aa20.33■□□□□ 0.84
PPFIA1-202ENST00000389547 ATP6V0A4Q9HBG4 840 aa20.33■□□□□ 0.84
PPFIA1-202ENST00000389547 CRYBG1Q9Y4K1 1723 aa20.33■□□□□ 0.84
PPFIA1-202ENST00000389547 MYL1P05976 194 aa20.33■□□□□ 0.84
PPFIA1-202ENST00000389547 MTERF2Q49AM1 385 aa20.33■□□□□ 0.84
PPFIA1-202ENST00000389547 MSL3Q8N5Y2 521 aaKnown RBP20.33■□□□□ 0.84
PPFIA1-202ENST00000389547 DAGLBQ8NCG7 672 aa20.33■□□□□ 0.84
PPFIA1-202ENST00000389547 LSM14BQ9BX40 385 aaKnown RBP20.33■□□□□ 0.84
PPFIA1-202ENST00000389547 AGPAT5Q9NUQ2 364 aa20.33■□□□□ 0.84
PPFIA1-202ENST00000389547 LRRIQ4A6NIV6 560 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 DKC1O60832 514 aaKnown RBP eCLIP20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 PLCB4Q15147 1175 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 GLE1Q53GS7 698 aaKnown RBP20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 KDM7AQ6ZMT4 941 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 PIK3R5Q8WYR1 880 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 FNBP1Q96RU3 617 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 MRIQ9BWK5 157 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 LACRTQ9GZZ8 138 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 RGS17Q9UGC6 210 aaPredicted RBP20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 FANCGO15287 622 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 RPS6P62753 249 aaKnown RBP20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 CEP128Q6ZU80 1094 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 PROCA1Q8NCQ7 364 aaPredicted RBP20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 MCM8Q9UJA3 840 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 TRPC6Q9Y210 931 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 SIPA1L3O60292 1781 aaPredicted RBP20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 NFIBO00712 420 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 SNUPNO95149 360 aaKnown RBP20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 MARK3P27448 753 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 POLR2FP61218 127 aaKnown RBP20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 FKBP1AP62942 108 aaKnown RBP20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 ASIC2Q16515 512 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 GMCL1Q96IK5 515 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 DNAJC18Q9H819 358 aa20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 CNOT10Q9H9A5 744 aaKnown RBP20.32■□□□□ 0.84
PPFIA1-202ENST00000389547 CCND2P30279 289 aa20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 COASYQ13057 564 aa20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 DPP9Q86TI2 863 aa20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 DDX20Q9UHI6 824 aaKnown RBP20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 PNMA2Q9UL42 364 aa20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 ZNF18P17022 549 aa20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 POLGP54098 1239 aaPredicted RBP20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 RETREG2Q8NC44 543 aa20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 PARVGQ9HBI0 331 aa20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 ADAMTS3O15072 1205 aa20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 PDIA5Q14554 519 aa20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 USP37Q86T82 979 aa20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 KIF2BQ8N4N8 673 aa20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 MRRFQ96E11 262 aaKnown RBP20.31■□□□□ 0.84
PPFIA1-202ENST00000389547 PRELPP51888 382 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 STRN3Q13033 797 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 TSEN2Q8NCE0 465 aaKnown RBP20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 NSUN6Q8TEA1 469 aaKnown RBP20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 MCUR1Q96AQ8 359 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 CAND2O75155 1236 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 PLTPP55058 493 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 NUGGCQ68CJ6 796 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 FAM43BQ6ZT52 329 aaPredicted RBP20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 ZNF365Q70YC5 407 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 SCYL3Q8IZE3 742 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 LXNQ9BS40 222 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 DDX23Q9BUQ8 820 aaKnown RBP20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 RNF14Q9UBS8 474 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 KCNG1Q9UIX4 513 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 EGFRP00533 1210 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 SLC8A3P57103 927 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 PDXDC2PQ6P474 469 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 P3H4Q92791 437 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 CCDC77Q9BR77 488 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 RAB17Q9H0T7 212 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 SCOCQ9UIL1 159 aa20.3■□□□□ 0.84
PPFIA1-202ENST00000389547 PALMO75781 387 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 VCAM1P19320 739 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 DBN1Q16643 649 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 DPH6Q7L8W6 267 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 EGFL6Q8IUX8 553 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 DLATP10515 647 aaKnown RBP20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 TAAR1Q96RJ0 339 aa20.29■□□□□ 0.84
PPFIA1-202ENST00000389547 MLXIPLQ9NP71 852 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms