RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 MAP3K7O43318 606 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 ADAM23O75077 832 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 OR6B1O95007 311 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 GOLGA8HP0CJ92 632 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 RXRAP19793 462 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 E2F2Q14209 437 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 CTC1Q2NKJ3 1217 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 PARP6Q2NL67 630 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 ANKDD1AQ495B1 522 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 VWA3BQ502W6 1294 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 B3GNT6Q6ZMB0 384 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 FAM20CQ8IXL6 584 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 GOLM1Q8NBJ4 401 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 SUCLG2Q96I99 432 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 LLPHQ9BRT6 129 aaKnown RBP10.05□□□□□ -0.8
PTPRA-204ENST00000380393 CLK4Q9HAZ1 481 aaKnown RBP10.05□□□□□ -0.8
PTPRA-204ENST00000380393 RXFP1Q9HBX9 757 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 ZBTB21Q9ULJ3 1066 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 STX8Q9UNK0 236 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 ZNF330Q9Y3S2 320 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-204ENST00000380393 HYOU1Q9Y4L1 999 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 PCDH11YQ9BZA8 1340 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 UTRNP46939 3433 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 BCL9LQ86UU0 1499 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 CCDC162PA2VCL2 907 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 NOTOA8MTQ0 251 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 PRPF3O43395 683 aaKnown RBP10.05□□□□□ -0.8
PTPRA-204ENST00000380393 UNC5CO95185 931 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 UBL4AP11441 157 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 PRKG1Q13976 671 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 NR1D2Q14995 579 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 UAP1Q16222 522 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-204ENST00000380393 CRY1Q16526 586 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 WASHC2DQ5SRD0 308 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 APTXQ7Z2E3 356 aaKnown RBP10.05□□□□□ -0.8
PTPRA-204ENST00000380393 AGGF1Q8N302 714 aaeCLIP10.05□□□□□ -0.8
PTPRA-204ENST00000380393 PIGBQ92521 554 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 PHF12Q96QT6 1004 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 PRPF18Q99633 342 aaKnown RBP10.05□□□□□ -0.8
PTPRA-204ENST00000380393 TIMMDC1Q9NPL8 285 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 TXLNGQ9NUQ3 528 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 TTC7AQ9ULT0 858 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-204ENST00000380393 RBMX2Q9Y388 322 aaKnown RBP10.05□□□□□ -0.8
PTPRA-204ENST00000380393 BCL9O00512 1426 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 COBLO75128 1261 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 ZBED1O96006 694 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 AFPP02771 609 aaKnown RBP10.05□□□□□ -0.8
PTPRA-204ENST00000380393 CCNB1P14635 433 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 ACADVLP49748 655 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 TMTC4Q5T4D3 741 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 AGAP9Q5VTM2 703 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 SPATA31A5Q5VU36 1347 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 ANO1Q5XXA6 986 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 LRRC74BQ6ZQY2 392 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 TAOK1Q7L7X3 1001 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 VASH1Q7L8A9 365 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-204ENST00000380393 VPS36Q86VN1 386 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 SPATA31A7Q8IWB4 1347 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 FAM186BQ8IYM0 893 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■■■■■ 44.1
PTPRA-204ENST00000380393 EPSTI1Q96J88 318 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 DHX36Q9H2U1 1008 aaKnown RBP10.05□□□□□ -0.8
PTPRA-204ENST00000380393 TCP11L1Q9NUJ3 509 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 MOSPD1Q9UJG1 213 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 MYH2Q9UKX2 1941 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 RCCD1A6NED2 376 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 BTBD19C9JJ37 291 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 PDIA3P30101 505 aaKnown RBP10.04□□□□□ -0.8
PTPRA-204ENST00000380393 EIF2B2P49770 351 aaKnown RBP10.04□□□□□ -0.8
PTPRA-204ENST00000380393 SEPT6Q14141 434 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 SPIDRQ14159 915 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 ARL13BQ3SXY8 428 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 CERKLQ49MI3 558 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-204ENST00000380393 GJC2Q5T442 439 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-204ENST00000380393 SATL1Q86VE3 508 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 OSTM1Q86WC4 334 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 CCDC110Q8TBZ0 833 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 ATXN2LQ8WWM7 1075 aaKnown RBP10.04□□□□□ -0.8
PTPRA-204ENST00000380393 AIFM3Q96NN9 605 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 MED15Q96RN5 788 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 ZNF184Q99676 751 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-204ENST00000380393 NUP85Q9BW27 656 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 CCSER1Q9C0I3 900 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 DPH5Q9H2P9 285 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 SCHIP1Q9P0W5 487 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-204ENST00000380393 SMIM31A0A1B0GVY4 71 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 GOLGA8BA8MQT2 603 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 BBOX1O75936 387 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 SKIV2L2P42285 1042 aaKnown RBP10.04□□□□□ -0.8
PTPRA-204ENST00000380393 MCMDC2Q4G0Z9 681 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 Q6ZNX1 250 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 MCF2L2Q86YR7 1114 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 ARHGAP24Q8N264 748 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 PIAS4Q8N2W9 510 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-204ENST00000380393 DDHD1Q8NEL9 900 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 TMEM237Q96Q45 408 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 KRT12Q99456 494 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 TANGO6Q9C0B7 1094 aa10.04□□□□□ -0.8
PTPRA-204ENST00000380393 DENND2DQ9H6A0 471 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-204ENST00000380393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.04□□□□□ -0.86e-7■■□□□ 13.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms