RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 NOX5Q96PH1 765 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 TMOD4Q9NZQ9 345 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 GTPBP10A4D1E9 387 aaKnown RBP16.2■□□□□ 0.18
PRNP-201ENST00000379440 SLC16A4O15374 487 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 JAM2P57087 298 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 SP4Q02446 784 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 BRD3Q15059 726 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 LONRF2Q1L5Z9 754 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 FAM102BQ5T8I3 360 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 NLRX1Q86UT6 975 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 CREG2Q8IUH2 290 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 CBWD1Q9BRT8 395 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 A1CFQ9NQ94 594 aaKnown RBP16.2■□□□□ 0.18
PRNP-201ENST00000379440 CYP39A1Q9NYL5 469 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 LOXHD1Q8IVV2 1947 aa16.2■□□□□ 0.18
PRNP-201ENST00000379440 USP2O75604 605 aaPredicted RBP16.19■□□□□ 0.18
PRNP-201ENST00000379440 OAZ1P54368 228 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 HNRNPH2P55795 449 aaKnown RBP16.19■□□□□ 0.18
PRNP-201ENST00000379440 TUBB4BP68371 445 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 DLG4P78352 724 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 ANO5Q75V66 913 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 HAUS6Q7Z4H7 955 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 NSUN6Q8TEA1 469 aaKnown RBP16.19■□□□□ 0.18
PRNP-201ENST00000379440 MOV10L1Q9BXT6 1211 aaKnown RBP16.19■□□□□ 0.18
PRNP-201ENST00000379440 SPDYE16A6NNV3 312 aaPredicted RBP16.19■□□□□ 0.18
PRNP-201ENST00000379440 POTEB2H3BUK9 544 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 SFNP31947 248 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 SOX10P56693 466 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 BFSP1Q12934 665 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 SLC9A9Q8IVB4 645 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 GPATCH11Q8N954 259 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.19■□□□□ 0.187e-8■■■□□ 15.3
PRNP-201ENST00000379440 GOLGA5Q8TBA6 731 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 INPP4AQ96PE3 977 aaPredicted RBP16.19■□□□□ 0.18
PRNP-201ENST00000379440 ACCSQ96QU6 501 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 TEX13BQ9BXU2 312 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 GABBR1Q9UBS5 961 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 FBXL5Q9UKA1 691 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 PCDHA10Q9Y5I2 948 aa16.19■□□□□ 0.18
PRNP-201ENST00000379440 POLR2AP24928 1970 aaKnown RBP16.19■□□□□ 0.18
PRNP-201ENST00000379440 IRF6O14896 467 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 GFPT2O94808 682 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 CKAP4Q07065 602 aaKnown RBP16.18■□□□□ 0.18
PRNP-201ENST00000379440 NAB2Q15742 525 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 TXLNBQ8N3L3 684 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 RNF10Q8N5U6 811 aaKnown RBP16.18■□□□□ 0.18
PRNP-201ENST00000379440 GPRASP2Q96D09 838 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 OSBPL9Q96SU4 736 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 TLR10Q9BXR5 811 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 FUT8Q9BYC5 575 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 TMEM206Q9H813 350 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 ACAD9Q9H845 621 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 SUGCTQ9HAC7 445 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 ABCB6Q9NP58 842 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 SMARCAL1Q9NZC9 954 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 EHD2Q9NZN4 543 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 ZNF862O60290 1169 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 PALMO75781 387 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 DDNO94850 711 aaPredicted RBP16.18■□□□□ 0.18
PRNP-201ENST00000379440 MAPTP10636 758 aaKnown RBP16.18■□□□□ 0.18
PRNP-201ENST00000379440 KCNA2P16389 499 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 C2orf54Q08AI8 447 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 SUPT20HL1Q3ZLR7 823 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 XRRA1Q6P2D8 792 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 KIFC3Q9BVG8 833 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 LUC7LQ9NQ29 371 aaKnown RBP16.18■□□□□ 0.18
PRNP-201ENST00000379440 SH3BP1Q9Y3L3 701 aa16.18■□□□□ 0.18
PRNP-201ENST00000379440 LRRN2O75325 713 aa16.17■□□□□ 0.18
PRNP-201ENST00000379440 GTF2BQ00403 316 aa16.17■□□□□ 0.18
PRNP-201ENST00000379440 PPP2R5AQ15172 486 aa16.17■□□□□ 0.18
PRNP-201ENST00000379440 BEND6Q5SZJ8 279 aaPredicted RBP16.17■□□□□ 0.18
PRNP-201ENST00000379440 ZNF746Q6NUN9 644 aaPredicted RBP16.17■□□□□ 0.18
PRNP-201ENST00000379440 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.17■□□□□ 0.18
PRNP-201ENST00000379440 DNAJC12Q9UKB3 198 aa16.17■□□□□ 0.18
PRNP-201ENST00000379440 BZW2Q9Y6E2 419 aaKnown RBP16.17■□□□□ 0.18
PRNP-201ENST00000379440 LMNB1P20700 586 aa16.17■□□□□ 0.18
PRNP-201ENST00000379440 PRKCIP41743 596 aa16.17■□□□□ 0.18
PRNP-201ENST00000379440 VGLL4Q14135 290 aa16.17■□□□□ 0.18
PRNP-201ENST00000379440 NOL9Q5SY16 702 aaKnown RBP16.17■□□□□ 0.18
PRNP-201ENST00000379440 SWSAP1Q6NVH7 229 aa16.17■□□□□ 0.18
PRNP-201ENST00000379440 INTS2Q9H0H0 1204 aaKnown RBP16.17■□□□□ 0.18
PRNP-201ENST00000379440 PRDM16Q9HAZ2 1276 aa16.17■□□□□ 0.18
PRNP-201ENST00000379440 ANKEF1Q9NU02 776 aa16.17■□□□□ 0.18
PRNP-201ENST00000379440 HOXC10Q9NYD6 342 aa16.17■□□□□ 0.18
PRNP-201ENST00000379440 NAGPAQ9UK23 515 aa16.17■□□□□ 0.18
PRNP-201ENST00000379440 CCDC169A6NNP5 214 aa16.16■□□□□ 0.18
PRNP-201ENST00000379440 ATP2A1O14983 1001 aa16.16■□□□□ 0.18
PRNP-201ENST00000379440 FTCDO95954 541 aa16.16■□□□□ 0.18
PRNP-201ENST00000379440 PRLRP16471 622 aa16.16■□□□□ 0.18
PRNP-201ENST00000379440 DNA2P51530 1060 aa16.16■□□□□ 0.18
PRNP-201ENST00000379440 MYL7Q01449 175 aa16.16■□□□□ 0.18
PRNP-201ENST00000379440 MAP2K1Q02750 393 aaPredicted RBP16.16■□□□□ 0.18
PRNP-201ENST00000379440 FSTL1Q12841 308 aa16.16■□□□□ 0.18
PRNP-201ENST00000379440 TREML2Q5T2D2 321 aa16.16■□□□□ 0.18
PRNP-201ENST00000379440 ALKBH5Q6P6C2 394 aaKnown RBP16.16■□□□□ 0.18
PRNP-201ENST00000379440 HNRNPLLQ8WVV9 542 aaKnown RBP16.16■□□□□ 0.18
PRNP-201ENST00000379440 HSPBP1Q9NZL4 362 aa16.16■□□□□ 0.18
PRNP-201ENST00000379440 HYOU1Q9Y4L1 999 aa16.16■□□□□ 0.18
PRNP-201ENST00000379440 PPP2R3BQ9Y5P8 575 aa16.16■□□□□ 0.18
PRNP-201ENST00000379440 SNCAIPQ9Y6H5 919 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms