RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 FAM219BQ5XKK7 198 aa8.03□□□□□ -1.12
GPCPD1-201ENST00000379019 EPS8L3Q8TE67 593 aaKnown RBP8.03□□□□□ -1.12
GPCPD1-201ENST00000379019 AOC2O75106 756 aa8.02□□□□□ -1.12
GPCPD1-201ENST00000379019 INPP5BP32019 993 aa8.02□□□□□ -1.12
GPCPD1-201ENST00000379019 TNS4Q8IZW8 715 aa8.02□□□□□ -1.12
GPCPD1-201ENST00000379019 LNX1Q8TBB1 728 aaPredicted RBP8.02□□□□□ -1.12
GPCPD1-201ENST00000379019 N4BP2L2Q92802 583 aaPredicted RBP8.02□□□□□ -1.12
GPCPD1-201ENST00000379019 GANQ9H2C0 597 aa8.02□□□□□ -1.12
GPCPD1-201ENST00000379019 TMBIM4Q9HC24 238 aa8.02□□□□□ -1.12
GPCPD1-201ENST00000379019 MAGEC2Q9UBF1 373 aaPredicted RBP8.02□□□□□ -1.12
GPCPD1-201ENST00000379019 TELO2Q9Y4R8 837 aa8.02□□□□□ -1.12
GPCPD1-201ENST00000379019 WDR81Q562E7 1941 aa8.02□□□□□ -1.12
GPCPD1-201ENST00000379019 LOC400499M0QZD8 3231 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 SPATA31D3P0C874 917 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 TXKP42681 527 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 MAGOHP61326 146 aaKnown RBP8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 TRIM29Q14134 588 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 KDM7AQ6ZMT4 941 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 SPATA31D4Q6ZUB0 917 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 C16orf86Q6ZW13 317 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 KIAA1328Q86T90 577 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 AGAP11Q8TF27 550 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 SCFD2Q8WU76 684 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 MAGOHBQ96A72 148 aaKnown RBP8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 MTMR9Q96QG7 549 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 DPH5Q9H2P9 285 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 SEMA4AQ9H3S1 761 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 ZDHHC18Q9NUE0 388 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 MORF4L1Q9UBU8 362 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 AKR1B10O60218 316 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 CYP3A4P08684 503 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 KRT16P08779 473 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 ZBED6P86452 979 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 GABPAQ06546 454 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 IRF5Q13568 498 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 ERICH1Q86X53 443 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 BANK1Q8NDB2 785 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 KAT5Q92993 513 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 CEP89Q96ST8 783 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 MTA3Q9BTC8 594 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 DDX23Q9BUQ8 820 aaKnown RBP8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 A0A1W2PQC6 194 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 SMIM23A6NLE4 172 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 CCNA1P78396 465 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 ZFPM1Q8IX07 1006 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 BLIDQ8IZY5 108 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 SHCBP1Q8NEM2 672 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 PARD3BQ8TEW8 1205 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 SCFD1Q8WVM8 642 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 RNF41Q9H4P4 317 aaPredicted RBP8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 MEIS1O00470 390 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 CCNT1O60563 726 aaKnown RBP8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 TPM1P09493 284 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 FCGRTP55899 365 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 NLRP5P59047 1200 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 POLR2FP61218 127 aaKnown RBP8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 ELF3P78545 371 aaPredicted RBP8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 TFAP4Q01664 338 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 KCTD10Q9H3F6 313 aa8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 DBR1Q9UK59 544 aaKnown RBP8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 NOVA2Q9UNW9 492 aaKnown RBP8.02□□□□□ -1.13
GPCPD1-201ENST00000379019 GOLGA6L9A6NEM1 432 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 PLA2G6O60733 806 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 SLC16A2P36021 539 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 KCNJ1P48048 391 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 SP3Q02447 781 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 VWA3BQ502W6 1294 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 FAM83BQ5T0W9 1011 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 DDX12PQ92771 950 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 C18orf8Q96DM3 657 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 SEC16BQ96JE7 1060 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 MYCBPQ99417 103 aaPredicted RBP8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 TMCO5BA8MYB1 307 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 IVLP07476 585 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 PREPLQ4J6C6 727 aaPredicted RBP8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 EMC10Q5UCC4 262 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 B4GALNT4Q76KP1 1039 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 USP38Q8NB14 1042 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 GLIS1Q8NBF1 620 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 TBCKQ8TEA7 893 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 PIGSQ96S52 555 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 GOPCQ9HD26 462 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 ZBTB21Q9ULJ3 1066 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 DDX3XO00571 662 aaKnown RBP eCLIP8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 ADCY2Q08462 1091 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 TAF1CQ15572 869 aaPredicted RBP8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 CCDC40Q4G0X9 1142 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 C12orf60Q5U649 245 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 HEATR3Q7Z4Q2 680 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 TMC3Q7Z5M5 1100 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 SOCS4Q8WXH5 440 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 TMEM47Q9BQJ4 181 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 KIF9Q9HAQ2 790 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 GREB1LQ9C091 1923 aaPredicted RBP8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 A0A0G2JMZ2 1700 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 USP17L15C9J2P7 530 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 USP17L13C9JLJ4 530 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 USP17L11C9JVI0 530 aa8.01□□□□□ -1.13
GPCPD1-201ENST00000379019 USP17L18D6R9N7 530 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms