RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 FOCADQ5VW36 1801 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 HLA-DOAP06340 250 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 PCK1P35558 622 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 MRPS25P82663 173 aaKnown RBP16.74■□□□□ 0.27
FXN-201ENST00000377270 NFIAQ12857 509 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 APOBEC3HQ6NTF7 200 aaKnown RBP16.74■□□□□ 0.27
FXN-201ENST00000377270 WDR59Q6PJI9 974 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 TRIM50Q86XT4 487 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 C1orf131Q8NDD1 294 aaKnown RBP16.74■□□□□ 0.27
FXN-201ENST00000377270 EXOC1Q9NV70 894 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 GMNCA6NCL1 334 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 RCCD1A6NED2 376 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 TDP2O95551 362 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 CYLC1P35663 651 aaPredicted RBP16.74■□□□□ 0.27
FXN-201ENST00000377270 SLC16A2P36021 539 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 VAV2P52735 878 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 PSMC1P62191 440 aaKnown RBP16.74■□□□□ 0.27
FXN-201ENST00000377270 AMPD3Q01432 767 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 ORC2Q13416 577 aaPredicted RBP16.74■□□□□ 0.27
FXN-201ENST00000377270 HAUS3Q68CZ6 603 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 TMEM53Q6P2H8 277 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 HHIPL2Q6UWX4 724 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 IFT43Q96FT9 208 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 ATP6V1G3Q96LB4 118 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 MTMR9Q96QG7 549 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 C7orf25Q9BPX7 421 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 THAP9Q9H5L6 903 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 KCNQ5Q9NR82 932 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 MAGEC2Q9UBF1 373 aaPredicted RBP16.74■□□□□ 0.27
FXN-201ENST00000377270 LRWD1Q9UFC0 647 aa16.74■□□□□ 0.27
FXN-201ENST00000377270 PNMA6FA0A0J9YX94 578 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 TESPA1A2RU30 521 aaPredicted RBP16.73■□□□□ 0.27
FXN-201ENST00000377270 SLC37A4O43826 429 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 GSTT1P30711 240 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 MATR3P43243 847 aaKnown RBP eCLIP16.73■□□□□ 0.27
FXN-201ENST00000377270 GLE1Q53GS7 698 aaKnown RBP16.73■□□□□ 0.27
FXN-201ENST00000377270 TTI2Q6NXR4 508 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 EEF2KMTQ96G04 330 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 DHTKD1Q96HY7 919 aaPredicted RBP16.73■□□□□ 0.27
FXN-201ENST00000377270 OSBPL10Q9BXB5 764 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 TAOK3Q9H2K8 898 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 DBNDD1Q9H9R9 158 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 ANKRD31Q8N7Z5 1873 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 HMGB1P1B2RPK0 211 aaPredicted RBP16.73■□□□□ 0.27
FXN-201ENST00000377270 MMP10P09238 476 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 EEF1GP26641 437 aaKnown RBP16.73■□□□□ 0.27
FXN-201ENST00000377270 TNNI2P48788 182 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 STK4Q13043 487 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 ZFPM1Q8IX07 1006 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 ARHGAP18Q8N392 663 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 MB21D1Q8N884 522 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 VCX3BQ9H321 246 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 VCX3AQ9NNX9 186 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 CHMP2BQ9UQN3 213 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 TMED5Q9Y3A6 229 aa16.73■□□□□ 0.27
FXN-201ENST00000377270 MACROD2A1Z1Q3 448 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 EDIL3O43854 480 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 PPP1R11O60927 126 aaPredicted RBP16.72■□□□□ 0.27
FXN-201ENST00000377270 BCRP11274 1271 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 PRLRP16471 622 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 ITGB3BPQ13352 177 aaPredicted RBP16.72■□□□□ 0.27
FXN-201ENST00000377270 RCN1Q15293 331 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 UBE2SQ16763 222 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 FAAH2Q6GMR7 532 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 OR52E8Q6IFG1 317 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 KCTD1Q719H9 257 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 CSGALNACT2Q8N6G5 542 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 SNRNP27Q8WVK2 155 aaKnown RBP16.72■□□□□ 0.27
FXN-201ENST00000377270 ZNF653Q96CK0 615 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 MASTLQ96GX5 879 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 ANKRD27Q96NW4 1050 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 KCNMB3Q9NPA1 279 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 CAPN11Q9UMQ6 739 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 R3HDM2Q9Y2K5 976 aaKnown RBP16.72■□□□□ 0.27
FXN-201ENST00000377270 DUSP10Q9Y6W6 482 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 RAD21O60216 631 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 FCER1AP12319 257 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 CRKP46108 304 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 PSMD7P51665 324 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 PPARDQ03181 441 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 TMEM266Q2M3C6 531 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 P2RX5Q93086 422 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 ABHD8Q96I13 439 aa16.72■□□□□ 0.27
FXN-201ENST00000377270 SRPK1Q96SB4 655 aaKnown RBP16.72■□□□□ 0.27
FXN-201ENST00000377270 MYO3BQ8WXR4 1341 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 LGALS16A8MUM7 142 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 AKR1B10O60218 316 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 HMGB2P26583 209 aaKnown RBP16.71■□□□□ 0.27
FXN-201ENST00000377270 CACNB3P54284 484 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 TCP10Q12799 353 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 GRB10Q13322 594 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 MEA1Q16626 185 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 FKBP15Q5T1M5 1219 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 ANKRD40Q6AI12 368 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 SV2BQ7L1I2 683 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 LONP2Q86WA8 852 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 HPS3Q969F9 1004 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 RIC8AQ9NPQ8 531 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 FBXO9Q9UK97 447 aaPredicted RBP16.71■□□□□ 0.27
FXN-201ENST00000377270 BRWD3Q6RI45 1802 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms