RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 MKNK1Q9BUB5 465 aa14.14□□□□□ -0.15
TRIM40-206ENST00000376724 ST6GALNAC4Q9H4F1 302 aa14.14□□□□□ -0.15
TRIM40-206ENST00000376724 AZI2Q9H6S1 392 aa14.14□□□□□ -0.15
TRIM40-206ENST00000376724 IVNS1ABPQ9Y6Y0 642 aa14.14□□□□□ -0.15
TRIM40-206ENST00000376724 LRRC37A2A6NM11 1700 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 ASB14A6NK59 587 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 ABL1P00519 1130 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 TRIM49P0CI25 452 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 TRIM49CP0CI26 452 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 ZBTB48P10074 688 aaPredicted RBP14.13□□□□□ -0.15
TRIM40-206ENST00000376724 TXNP10599 105 aaKnown RBP14.13□□□□□ -0.15
TRIM40-206ENST00000376724 CYLC1P35663 651 aaPredicted RBP14.13□□□□□ -0.15
TRIM40-206ENST00000376724 GCLCP48506 637 aaPredicted RBP14.13□□□□□ -0.15
TRIM40-206ENST00000376724 ARHGAP29Q52LW3 1261 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 CELF3Q5SZQ8 465 aaKnown RBP14.13□□□□□ -0.15
TRIM40-206ENST00000376724 PDXDC1Q6P996 788 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 KCNV1Q6PIU1 500 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 ARMCX2Q7L311 632 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 MTERF4Q7Z6M4 381 aaKnown RBP14.13□□□□□ -0.15
TRIM40-206ENST00000376724 TRIM50Q86XT4 487 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 ZSWIM2Q8NEG5 633 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 IFT74Q96LB3 600 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 CCDC42Q96M95 316 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 SPATA33Q96N06 139 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 NRBP2Q9NSY0 501 aa14.13□□□□□ -0.15
TRIM40-206ENST00000376724 ZNFX1Q9P2E3 1918 aaKnown RBP14.13□□□□□ -0.15
TRIM40-206ENST00000376724 ARID2Q68CP9 1835 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 ADGRA3Q8IWK6 1321 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 ANKRD63C9JTQ0 380 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 TUBB4AP04350 444 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 GBP6Q6ZN66 633 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 SLC9A9Q8IVB4 645 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 SLC7A3Q8WY07 619 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 WDR24Q96S15 920 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 PARK7Q99497 189 aaKnown RBP14.12□□□□□ -0.15
TRIM40-206ENST00000376724 GPR20Q99678 358 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 C17orf75Q9HAS0 396 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 HSPBP1Q9NZL4 362 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 GCNT4Q9P109 453 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 TFR2Q9UP52 801 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 EXOC7Q9UPT5 735 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 REXO2Q9Y3B8 237 aaKnown RBP14.12□□□□□ -0.15
TRIM40-206ENST00000376724 MCM3APO60318 1980 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 GOLGA8IPA6NC78 632 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 GOLGA8JA6NMD2 632 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 FANCGO15287 622 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 PON1P27169 355 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 ARID5AQ03989 594 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 RAPGEF1Q13905 1077 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 ENOX2Q16206 610 aaKnown RBP14.12□□□□□ -0.15
TRIM40-206ENST00000376724 SPIRE2Q8WWL2 714 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 NTPCRQ9BSD7 190 aaKnown RBP14.12□□□□□ -0.15
TRIM40-206ENST00000376724 NIFKQ9BYG3 293 aaKnown RBP14.12□□□□□ -0.15
TRIM40-206ENST00000376724 EDEM3Q9BZQ6 932 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 DEF6Q9H4E7 631 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 ARHGAP20Q9P2F6 1191 aa14.12□□□□□ -0.15
TRIM40-206ENST00000376724 PHLPP2Q6ZVD8 1323 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 IPO7O95373 1038 aaKnown RBP14.11□□□□□ -0.15
TRIM40-206ENST00000376724 ITGBL1O95965 494 aaPredicted RBP14.11□□□□□ -0.15
TRIM40-206ENST00000376724 KRT13P13646 458 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 CNGA1P29973 690 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 CASQ1P31415 396 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 HNRNPH3P31942 346 aaKnown RBP14.11□□□□□ -0.15
TRIM40-206ENST00000376724 EIF4A3P38919 411 aaKnown RBP14.11□□□□□ -0.15
TRIM40-206ENST00000376724 FMO5P49326 533 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 CDK17Q00537 523 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 CYP27A1Q02318 531 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 BFSP1Q12934 665 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 TTLL4Q14679 1199 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 ZNF792Q3KQV3 632 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 SFMBT2Q5VUG0 894 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 CCDC62Q6P9F0 684 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 DPP9Q86TI2 863 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 MAP4K3Q8IVH8 894 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 CCDC170Q8IYT3 715 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 XXYLT1Q8NBI6 393 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 MORC4Q8TE76 937 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 TSC1Q92574 1164 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 GANQ9H2C0 597 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 MORF4L1Q9UBU8 362 aa14.11□□□□□ -0.15
TRIM40-206ENST00000376724 KIF5CO60282 957 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 ZNF157P51786 506 aaPredicted RBP14.1□□□□□ -0.15
TRIM40-206ENST00000376724 DLG4P78352 724 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 KRT83P78385 493 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 MYBPC2Q14324 1141 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 CBWD6Q4V339 395 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 TDRD12Q587J7 1177 aaKnown RBP14.1□□□□□ -0.15
TRIM40-206ENST00000376724 CBWD3Q5JTY5 395 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 CBWD5Q5RIA9 395 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 GJC2Q5T442 439 aaPredicted RBP14.1□□□□□ -0.15
TRIM40-206ENST00000376724 KLHDC7AQ5VTJ3 777 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 GPR142Q7Z601 462 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 KIAA1328Q86T90 577 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 AFAP1L1Q8TED9 768 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 SAAL1Q96ER3 474 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 BICD1Q96G01 975 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 DHX33Q9H6R0 707 aaKnown RBP14.1□□□□□ -0.15
TRIM40-206ENST00000376724 CGNQ9P2M7 1197 aaKnown RBP14.1□□□□□ -0.15
TRIM40-206ENST00000376724 TRIM10Q9UDY6 481 aa14.1□□□□□ -0.15
TRIM40-206ENST00000376724 LRRIQ4A6NIV6 560 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms