RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 BMP3P12645 472 aa13.27□□□□□ -0.28
VPS13A-204ENST00000376634 PHKA2P46019 1235 aa13.27□□□□□ -0.28
VPS13A-204ENST00000376634 CNGA3Q16281 694 aa13.27□□□□□ -0.28
VPS13A-204ENST00000376634 TEX9Q8N6V9 391 aa13.27□□□□□ -0.28
VPS13A-204ENST00000376634 TRIM54Q9BYV2 358 aa13.27□□□□□ -0.28
VPS13A-204ENST00000376634 PNMA6FA0A0J9YX94 578 aa13.27□□□□□ -0.29
VPS13A-204ENST00000376634 CCDC78A2IDD5 438 aa13.27□□□□□ -0.29
VPS13A-204ENST00000376634 GOLGA8MH3BSY2 632 aa13.27□□□□□ -0.29
VPS13A-204ENST00000376634 TDRD7Q8NHU6 1098 aaKnown RBP13.27□□□□□ -0.29
VPS13A-204ENST00000376634 GDF11O95390 407 aa13.27□□□□□ -0.29
VPS13A-204ENST00000376634 SLC9A1P19634 815 aa13.27□□□□□ -0.29
VPS13A-204ENST00000376634 AP1B1Q10567 949 aa13.27□□□□□ -0.29
VPS13A-204ENST00000376634 KLHL38Q2WGJ6 581 aa13.27□□□□□ -0.29
VPS13A-204ENST00000376634 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.29
VPS13A-204ENST00000376634 PBXIP1Q96AQ6 731 aa13.27□□□□□ -0.29
VPS13A-204ENST00000376634 FAM49AQ9H0Q0 323 aaPredicted RBP13.27□□□□□ -0.29
VPS13A-204ENST00000376634 NAALADL2Q58DX5 795 aa13.27□□□□□ -0.29
VPS13A-204ENST00000376634 EDC3Q96F86 508 aaKnown RBP13.27□□□□□ -0.29
VPS13A-204ENST00000376634 DHX36Q9H2U1 1008 aaKnown RBP13.27□□□□□ -0.29
VPS13A-204ENST00000376634 KRT14P02533 472 aa13.27□□□□□ -0.29
VPS13A-204ENST00000376634 MMP1P03956 469 aa13.27□□□□□ -0.29
VPS13A-204ENST00000376634 SLC10A5Q5PT55 438 aa13.27□□□□□ -0.29
VPS13A-204ENST00000376634 SRPK1Q96SB4 655 aaKnown RBP13.27□□□□□ -0.29
VPS13A-204ENST00000376634 ASNSD1Q9NWL6 643 aa13.27□□□□□ -0.29
VPS13A-204ENST00000376634 CLRN2A0PK11 232 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 H0YC42 278 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 ZBED6P86452 979 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 MMS22LQ6ZRQ5 1243 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 CATSPER1Q8NEC5 780 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 NUP85Q9BW27 656 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 LEMD3Q9Y2U8 911 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 ADORA1P30542 326 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 LRRC41Q15345 812 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 ZNF667Q5HYK9 610 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 KCNA6P17658 529 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 GFM2Q969S9 779 aaKnown RBP13.26□□□□□ -0.29
VPS13A-204ENST00000376634 DIABLOQ9NR28 239 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 NOVA2Q9UNW9 492 aaKnown RBP13.26□□□□□ -0.29
VPS13A-204ENST00000376634 SPTLC3Q9NUV7 552 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 DAB1O75553 588 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 CC2D2BQ6DHV5 1058 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 TWF2Q6IBS0 349 aaKnown RBP13.26□□□□□ -0.29
VPS13A-204ENST00000376634 OPTNQ96CV9 577 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 RUBCNLQ9H714 662 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 ABCC4O15439 1325 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 H0Y3Z8 333 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 IMPDH2P12268 514 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 TNFAIP2Q03169 654 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 RC3H1Q5TC82 1133 aaKnown RBP13.26□□□□□ -0.29
VPS13A-204ENST00000376634 RRM2BQ7LG56 351 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 DDIASQ8IXT1 998 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 TGS1Q96RS0 853 aaKnown RBP13.26□□□□□ -0.29
VPS13A-204ENST00000376634 TSSK1BQ9BXA7 367 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 TOPORSQ9NS56 1045 aaPredicted RBP13.26□□□□□ -0.29
VPS13A-204ENST00000376634 ITPRIPL1Q6GPH6 555 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 TRIM62Q9BVG3 475 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 ZNF341Q9BYN7 854 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 GDAQ9Y2T3 454 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 MYL3P08590 195 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 UBE3CQ15386 1083 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 PASD1Q8IV76 773 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 CCNYL1Q8N7R7 359 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 OR6B3Q8NGW1 331 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 RASGRP4Q8TDF6 673 aa13.26□□□□□ -0.29
VPS13A-204ENST00000376634 ANO4Q32M45 955 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 BEND6Q5SZJ8 279 aaPredicted RBP13.25□□□□□ -0.29
VPS13A-204ENST00000376634 HIBCHQ6NVY1 386 aaPredicted RBP13.25□□□□□ -0.29
VPS13A-204ENST00000376634 H0Y626 953 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 ORC4O43929 436 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 TRIM16O95361 564 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 POU5F1BQ06416 359 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 THEMIS2Q5TEJ8 643 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 APOA5Q6Q788 366 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 NPC1L1Q9UHC9 1359 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 ZNF608Q9ULD9 1512 aaPredicted RBP13.25□□□□□ -0.29
VPS13A-204ENST00000376634 DPYSL4O14531 572 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 ANO5Q75V66 913 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 EEPD1Q7L9B9 569 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 TTC13Q8NBP0 860 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 ZNF189O75820 626 aaPredicted RBP13.25□□□□□ -0.29
VPS13A-204ENST00000376634 GPS1Q13098 491 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 FAM180AQ6UWF9 173 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 TBC1D1Q86TI0 1168 aaPredicted RBP13.25□□□□□ -0.29
VPS13A-204ENST00000376634 PCCAP05165 728 aaPredicted RBP13.25□□□□□ -0.29
VPS13A-204ENST00000376634 KRT72Q14CN4 511 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 CATSPER4Q7RTX7 472 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 TBC1D19Q8N5T2 526 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 BTN2A2Q8WVV5 523 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 CASS4Q9NQ75 786 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 ARAP3Q8WWN8 1544 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 WDR47O94967 919 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 CRKLP46109 303 aaKnown RBP13.25□□□□□ -0.29
VPS13A-204ENST00000376634 CACNB1Q02641 598 aaPredicted RBP13.25□□□□□ -0.29
VPS13A-204ENST00000376634 ZNF555Q8NEP9 628 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 ZFP42Q96MM3 310 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 ACAP3Q96P50 834 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 EMILIN3Q9NT22 766 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 UBXN8O00124 270 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.25□□□□□ -0.29
VPS13A-204ENST00000376634 SCN4BQ8IWT1 228 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms