RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 CAP2P40123 477 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 ADCY8P40145 1251 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 VAMP7P51809 220 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 FAM160B2Q86V87 743 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 PSMD1Q99460 953 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 PLVAPQ9BX97 442 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 RASAL2Q9UJF2 1139 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 SNX12Q9UMY4 172 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 PLAGL2Q9UPG8 496 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 AKT3Q9Y243 479 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 MARF1Q9Y4F3 1742 aaKnown RBP12.04□□□□□ -0.48
HDAC6-203ENST00000376619 ACSL3O95573 720 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 TBC1D8O95759 1140 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 FERP16591 822 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 FAM47CQ5HY64 1035 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 OTUD6BQ8N6M0 293 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 CPA5Q8WXQ8 436 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 DHX38Q92620 1227 aaKnown RBP12.04□□□□□ -0.48
HDAC6-203ENST00000376619 ATP6V0A1Q93050 837 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 RNF25Q96BH1 459 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-203ENST00000376619 ACSF2Q96CM8 615 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-203ENST00000376619 TRIM51Q9BSJ1 452 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 INTS2Q9H0H0 1204 aaKnown RBP12.04□□□□□ -0.48
HDAC6-203ENST00000376619 STIM2Q9P246 746 aa12.04□□□□□ -0.48
HDAC6-203ENST00000376619 YDJCA8MPS7 323 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 PI4K2BG5E9Z4 385 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 TMEM191BP0C7N4 346 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 GAP43P17677 238 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 NSFP46459 744 aaKnown RBP12.03□□□□□ -0.48
HDAC6-203ENST00000376619 CRY2Q49AN0 593 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 MUM1L1Q5H9M0 696 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 FAM182AQ5T1J6 154 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 KAT5Q92993 513 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 AS3MTQ9HBK9 375 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 CD2APQ9Y5K6 639 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 BRWD3Q6RI45 1802 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 PDE2AO00408 941 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-203ENST00000376619 FOXN3O00409 490 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-203ENST00000376619 CSPG5O95196 566 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 MAPK4P31152 587 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 ZKSCAN8Q15776 578 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-203ENST00000376619 CDO1Q16878 200 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 CCDC38Q502W7 563 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 MOB2Q70IA6 237 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 TMEM139Q8IV31 216 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 C1orf54Q8WWF1 131 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 MTMR9Q96QG7 549 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 FEM1BQ9UK73 627 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 PGRMC1O00264 195 aaKnown RBP12.03□□□□□ -0.48
HDAC6-203ENST00000376619 ACTN2P35609 894 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 USP14P54578 494 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 RHPN2Q8IUC4 686 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 PODXL2Q9NZ53 605 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 MTRF1LQ9UGC7 380 aaKnown RBP12.03□□□□□ -0.48
HDAC6-203ENST00000376619 ANAPC7Q9UJX3 599 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 ZNF148Q9UQR1 794 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 CEP83Q9Y592 693 aa12.03□□□□□ -0.48
HDAC6-203ENST00000376619 LRRC37A3O60309 1634 aa12.02□□□□□ -0.48
HDAC6-203ENST00000376619 WDR64B1ANS9 1081 aa12.02□□□□□ -0.48
HDAC6-203ENST00000376619 CNGA1P29973 690 aa12.02□□□□□ -0.48
HDAC6-203ENST00000376619 RDXP35241 583 aaKnown RBP12.02□□□□□ -0.48
HDAC6-203ENST00000376619 MNAT1P51948 309 aa12.02□□□□□ -0.48
HDAC6-203ENST00000376619 NNTQ13423 1086 aa12.02□□□□□ -0.48
HDAC6-203ENST00000376619 KCTD2Q14681 263 aa12.02□□□□□ -0.48
HDAC6-203ENST00000376619 BRDTQ58F21 947 aaPredicted RBP12.02□□□□□ -0.48
HDAC6-203ENST00000376619 PPP1R21Q6ZMI0 780 aa12.02□□□□□ -0.48
HDAC6-203ENST00000376619 DAGLBQ8NCG7 672 aa12.02□□□□□ -0.48
HDAC6-203ENST00000376619 MSTO1Q9BUK6 570 aa12.02□□□□□ -0.48
HDAC6-203ENST00000376619 MKRN1Q9UHC7 482 aaKnown RBP12.02□□□□□ -0.48
HDAC6-203ENST00000376619 MORC2Q9Y6X9 1032 aaPredicted RBP12.02□□□□□ -0.48
HDAC6-203ENST00000376619 GOLGA8MH3BSY2 632 aa12.02□□□□□ -0.49
HDAC6-203ENST00000376619 NUMBP49757 651 aa12.02□□□□□ -0.49
HDAC6-203ENST00000376619 NOVA2Q9UNW9 492 aaKnown RBP12.02□□□□□ -0.49
HDAC6-203ENST00000376619 SUGT1Q9Y2Z0 365 aa12.02□□□□□ -0.49
HDAC6-203ENST00000376619 DOT1LQ8TEK3 1739 aa12.02□□□□□ -0.49
HDAC6-203ENST00000376619 LRRIQ3A6PVS8 624 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-203ENST00000376619 H3BQF6 201 aa12.02□□□□□ -0.49
HDAC6-203ENST00000376619 TTI1O43156 1089 aa12.02□□□□□ -0.49
HDAC6-203ENST00000376619 ENTPD3O75355 529 aa12.02□□□□□ -0.49
HDAC6-203ENST00000376619 SLITRK3O94933 977 aa12.02□□□□□ -0.49
HDAC6-203ENST00000376619 FMO5P49326 533 aa12.02□□□□□ -0.49
HDAC6-203ENST00000376619 LACTBP83111 547 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-203ENST00000376619 TUBB2AQ13885 445 aa12.02□□□□□ -0.49
HDAC6-203ENST00000376619 CEP57Q86XR8 500 aa12.02□□□□□ -0.49
HDAC6-203ENST00000376619 TUBB2BQ9BVA1 445 aa12.02□□□□□ -0.49
HDAC6-203ENST00000376619 DAAM1Q9Y4D1 1078 aa12.02□□□□□ -0.49
HDAC6-203ENST00000376619 ESYT2A0FGR8 921 aa12.01□□□□□ -0.49
HDAC6-203ENST00000376619 GBP2P32456 591 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-203ENST00000376619 RRP1BQ14684 758 aaKnown RBP12.01□□□□□ -0.49
HDAC6-203ENST00000376619 SLC18A3Q16572 532 aa12.01□□□□□ -0.49
HDAC6-203ENST00000376619 C9orf131Q5VYM1 1079 aa12.01□□□□□ -0.49
HDAC6-203ENST00000376619 TRIM50Q86XT4 487 aa12.01□□□□□ -0.49
HDAC6-203ENST00000376619 SYT2Q8N9I0 419 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-203ENST00000376619 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-203ENST00000376619 FAM163AQ96GL9 167 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-203ENST00000376619 CAPS2Q9BXY5 557 aa12.01□□□□□ -0.49
HDAC6-203ENST00000376619 HSPBP1Q9NZL4 362 aa12.01□□□□□ -0.49
HDAC6-203ENST00000376619 GAKO14976 1311 aa12.01□□□□□ -0.49
HDAC6-203ENST00000376619 POC1B-GALNT4F8VUJ3 575 aa12.01□□□□□ -0.49
HDAC6-203ENST00000376619 DDNO94850 711 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms