RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 DMAC2Q9NW81 257 aa13.46□□□□□ -0.25
TNFSF13B-201ENST00000375887 PKD2L1Q9P0L9 805 aa13.46□□□□□ -0.25
TNFSF13B-201ENST00000375887 GOLGA6L10A6NI86 522 aa13.46□□□□□ -0.26
TNFSF13B-201ENST00000375887 FOXN3O00409 490 aaPredicted RBP13.46□□□□□ -0.26
TNFSF13B-201ENST00000375887 GAP43P17677 238 aa13.46□□□□□ -0.26
TNFSF13B-201ENST00000375887 SF3A3Q12874 501 aaKnown RBP eCLIP13.46□□□□□ -0.26
TNFSF13B-201ENST00000375887 PRPF4BQ13523 1007 aaKnown RBP13.46□□□□□ -0.26
TNFSF13B-201ENST00000375887 ZYXQ15942 572 aaKnown RBP13.46□□□□□ -0.26
TNFSF13B-201ENST00000375887 LRCH2Q5VUJ6 765 aa13.46□□□□□ -0.26
TNFSF13B-201ENST00000375887 SYCE1Q8N0S2 351 aa13.46□□□□□ -0.26
TNFSF13B-201ENST00000375887 INTS2Q9H0H0 1204 aaKnown RBP13.46□□□□□ -0.26
TNFSF13B-201ENST00000375887 TDRD3Q9H7E2 651 aaKnown RBP13.46□□□□□ -0.26
TNFSF13B-201ENST00000375887 NOVA2Q9UNW9 492 aaKnown RBP13.46□□□□□ -0.26
TNFSF13B-201ENST00000375887 CAPN7Q9Y6W3 813 aa13.46□□□□□ -0.26
TNFSF13B-201ENST00000375887 FRMPD4Q14CM0 1322 aa13.46□□□□□ -0.26
TNFSF13B-201ENST00000375887 TISP43B9A030 160 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 PIK3CDO00329 1044 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 TMEM253P0C7T8 217 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 DACT2Q5SW24 774 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 BTNL9Q6UXG8 535 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 OTUD6BQ8N6M0 293 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 LMO3Q8TAP4 145 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 ZNF622Q969S3 477 aaKnown RBP eCLIP13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 PAGR1Q9BTK6 254 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 NCANO14594 1321 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 ATP8B3O60423 1300 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 KIF13BQ9NQT8 1826 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 NPR1P16066 1061 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 LMNB1P20700 586 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 HNRNPH1P31943 449 aaKnown RBP13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 DLG4P78352 724 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 IFT88Q13099 833 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 QPCTQ16769 361 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 MCTP2Q6DN12 878 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 FAM178BQ8IXR5 827 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 CCDC26Q8TAB7 109 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 ACER1Q8TDN7 264 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 SLC20A1Q8WUM9 679 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 ELMO3Q96BJ8 720 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 HOOK2Q96ED9 719 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 TMOD4Q9NZQ9 345 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 TTC7AQ9ULT0 858 aaPredicted RBP13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 SCAF8Q9UPN6 1271 aaKnown RBP13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 ANKRD31Q8N7Z5 1873 aa13.45□□□□□ -0.26
TNFSF13B-201ENST00000375887 ARP10275 920 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 GUCY2CP25092 1073 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 ZNF131P52739 623 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 MAGOHP61326 146 aaKnown RBP13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 ODR4Q5SWX8 454 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 CCDC174Q6PII3 467 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 C6orf89Q6UWU4 347 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 MMS22LQ6ZRQ5 1243 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 PODNQ7Z5L7 613 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 CTNNBL1Q8WYA6 563 aaPredicted RBP13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 MAGOHBQ96A72 148 aaKnown RBP13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 CYFIP2Q96F07 1278 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 TXLNGYQ9BZA5 131 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 EPB41L4BQ9H329 900 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 TUFT1Q9NNX1 390 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 SEPT11Q9NVA2 429 aaKnown RBP13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 APEX2Q9UBZ4 518 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 ATP8A1Q9Y2Q0 1164 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 UTP11Q9Y3A2 253 aaKnown RBP13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 DDX39AO00148 427 aaKnown RBP13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 PTENP60484 403 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 PPP2R5CQ13362 524 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 MKRN4PQ13434 485 aaPredicted RBP13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 LLGL1Q15334 1064 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 NFIL3Q16649 462 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 SPRED3Q2MJR0 410 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 UBAP2Q5T6F2 1119 aaKnown RBP13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 ZDHHC14Q8IZN3 488 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 DAW1Q8N136 415 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 SLC5A5Q92911 643 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 MKNK1Q9BUB5 465 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 STK24Q9Y6E0 443 aa13.44□□□□□ -0.26
TNFSF13B-201ENST00000375887 SCN9AQ15858 1988 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 TRAPPC3O43617 180 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 SHBGP04278 402 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 MARCKSL1P49006 195 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 BIRC3Q13489 604 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 ODF2Q5BJF6 829 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 ZSWIM2Q8NEG5 633 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 MDM1Q8TC05 714 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 KRT35Q92764 455 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 UNC45AQ9H3U1 944 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 ZDHHC18Q9NUE0 388 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 DDX20Q9UHI6 824 aaKnown RBP13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 FRMD4BQ9Y2L6 1034 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 ATXN2Q99700 1313 aaKnown RBP13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 GMNCA6NCL1 334 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 PPP1R12BO60237 982 aaPredicted RBP13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 KIAA0754O94854 1291 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 TNFAIP3P21580 790 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 PPP2R2AP63151 447 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 MAPK7Q13164 816 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 KRT71Q3SY84 523 aa13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 MEX3CQ5U5Q3 659 aaKnown RBP13.43□□□□□ -0.26
TNFSF13B-201ENST00000375887 DUPD1Q68J44 220 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms