RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PRR16Q569H4 304 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 PPP1R18Q6NYC8 613 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 AADACL2Q6P093 401 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 EPM2AIP1Q7L775 607 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 VPS36Q86VN1 386 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 C3orf20Q8ND61 904 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 FAM114A2Q9NRY5 505 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 ZNRF3Q9ULT6 936 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 TPX2Q9ULW0 747 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 ATAD5Q96QE3 1844 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 IGKV6D-41A0A0C4DH26 115 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 CTNND1O60716 968 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 CYP4A11Q02928 519 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 SNCBQ16143 134 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 NIM1KQ8IY84 436 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 SYCE1Q8N0S2 351 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 OLIG1Q8TAK6 271 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 UHMK1Q8TAS1 419 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 CCT6BQ92526 530 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 TLCD1Q96CP7 247 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 HVCN1Q96D96 273 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 XPO6Q96QU8 1125 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 P2RX7Q99572 595 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 FHDC1Q9C0D6 1143 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 EPB41L4BQ9H329 900 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 SPON1Q9HCB6 807 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 SNX24Q9Y343 169 aa15.31■□□□□ 0.04
CLCNKA-202ENST00000375692 ASTN1O14525 1302 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 PITPNM2Q9BZ72 1349 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 MPHOSPH10O00566 681 aaKnown RBP15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 DDX3YO15523 660 aaKnown RBP15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 CALUO43852 315 aaPredicted RBP15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 PPFIA2O75334 1257 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 VIL1P09327 827 aaKnown RBP15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 SPATA31C1P0DKV0 1188 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 PLTPP55058 493 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 SNAP25P60880 206 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 GABPAQ06546 454 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 PREPLQ4J6C6 727 aaPredicted RBP15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 GRIPAP1Q4V328 841 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 RSBN1LQ6PCB5 846 aaPredicted RBP15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 TXLNGYQ9BZA5 131 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 DNM3Q9UQ16 869 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 A0A0A6YYK5 440 aaPredicted RBP15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 PDXKO00764 312 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 GCNT3O95395 438 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 DR1Q01658 176 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 E2F5Q15329 346 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 ERMARDQ5T6L9 678 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 SLC30A5Q8TAD4 765 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 ARHGEF26Q96DR7 871 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 CHMP6Q96FZ7 201 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 SGSM3Q96HU1 749 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 SELENOSQ9BQE4 189 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 ANO3Q9BYT9 981 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 TAS2R14Q9NYV8 317 aa15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 SCAF8Q9UPN6 1271 aaKnown RBP15.3■□□□□ 0.04
CLCNKA-202ENST00000375692 CHN1P15882 459 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 FKBP1AP62942 108 aaKnown RBP15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 IFI35P80217 286 aaPredicted RBP15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 SPIRE1Q08AE8 756 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 KSR1Q8IVT5 923 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 RNF25Q96BH1 459 aaPredicted RBP15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 GMLQ99445 158 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 RUSC1Q9BVN2 902 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 ZDHHC18Q9NUE0 388 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 TMOD4Q9NZQ9 345 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 MCM8Q9UJA3 840 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 PCDHA1Q9Y5I3 950 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 ARFGEF1Q9Y6D6 1849 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 FAM196BA6NMK8 535 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 STAT1P42224 750 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 PTENP60484 403 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 QRICH1Q2TAL8 776 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 LACTB2Q53H82 288 aaPredicted RBP15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 DUPD1Q68J44 220 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 SLC30A10Q6XR72 485 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 PALB2Q86YC2 1186 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 SYT2Q8N9I0 419 aaPredicted RBP15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 GIMAP7Q8NHV1 300 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 ERP44Q9BS26 406 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 BHMT2Q9H2M3 363 aa15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 SEPT11Q9NVA2 429 aaKnown RBP15.29■□□□□ 0.04
CLCNKA-202ENST00000375692 FERP16591 822 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 TAL1P17542 331 aaPredicted RBP15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 PLS1Q14651 629 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 SHROOM1Q2M3G4 852 aaPredicted RBP15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 ALG3Q92685 438 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 FAM129AQ9BZQ8 928 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 TYW1Q9NV66 732 aaKnown RBP15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 FAM198AQ9UFP1 575 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 SERPINA10Q9UK55 444 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 DAAM1Q9Y4D1 1078 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 CLRN2A0PK11 232 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 MMEP08473 750 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 PMS2P54278 862 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 NPEPPSP55786 919 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 PPATQ06203 517 aa15.28■□□□□ 0.04
CLCNKA-202ENST00000375692 NEDD9Q14511 834 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms