RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 SSTR3P32745 418 aaPredicted RBP17.43■□□□□ 0.38
SDHB-201ENST00000375499 EMC2Q15006 297 aa17.43■□□□□ 0.38
SDHB-201ENST00000375499 PTCRAQ6ISU1 281 aaPredicted RBP17.43■□□□□ 0.38
SDHB-201ENST00000375499 SLC24A5Q71RS6 500 aa17.43■□□□□ 0.38
SDHB-201ENST00000375499 CMTR2Q8IYT2 770 aaKnown RBP17.43■□□□□ 0.38
SDHB-201ENST00000375499 C4orf32Q8N8J7 132 aa17.43■□□□□ 0.38
SDHB-201ENST00000375499 NEK9Q8TD19 979 aa17.43■□□□□ 0.38
SDHB-201ENST00000375499 MRPL38Q96DV4 380 aaKnown RBP17.43■□□□□ 0.38
SDHB-201ENST00000375499 NLRP4Q96MN2 994 aa17.43■□□□□ 0.38
SDHB-201ENST00000375499 C5orf67F2Z3F1 127 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 DKC1O60832 514 aaKnown RBP eCLIP17.42■□□□□ 0.38
SDHB-201ENST00000375499 MED24O75448 989 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 LYPLA2O95372 231 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 OR52Z1P0C646 297 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 STAG3L1P0CL83 205 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 SPATA31C1P0DKV0 1188 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 FGFR1P11362 822 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 GJB2P29033 226 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 BMPR1AP36894 532 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 POLGP54098 1239 aaPredicted RBP17.42■□□□□ 0.38
SDHB-201ENST00000375499 GPM6BQ13491 265 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 XKR9Q5GH70 373 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 BACH2Q9BYV9 841 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 IFT122Q9HBG6 1241 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 C1orf112Q9NSG2 853 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 LRFN2Q9ULH4 789 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 COL4A3BPQ9Y5P4 624 aa17.42■□□□□ 0.38
SDHB-201ENST00000375499 GRM6O15303 877 aa17.41■□□□□ 0.38
SDHB-201ENST00000375499 CSPG5O95196 566 aa17.41■□□□□ 0.38
SDHB-201ENST00000375499 ATF7P17544 494 aaPredicted RBP17.41■□□□□ 0.38
SDHB-201ENST00000375499 TECP42680 631 aa17.41■□□□□ 0.38
SDHB-201ENST00000375499 FAM189BP81408 668 aa17.41■□□□□ 0.38
SDHB-201ENST00000375499 GNL2Q13823 731 aaKnown RBP17.41■□□□□ 0.38
SDHB-201ENST00000375499 TIGD5Q53EQ6 642 aa17.41■□□□□ 0.38
SDHB-201ENST00000375499 ODR4Q5SWX8 454 aa17.41■□□□□ 0.38
SDHB-201ENST00000375499 ZNF410Q86VK4 478 aa17.41■□□□□ 0.38
SDHB-201ENST00000375499 PIGOQ8TEQ8 1089 aa17.41■□□□□ 0.38
SDHB-201ENST00000375499 SLC7A3Q8WY07 619 aa17.41■□□□□ 0.38
SDHB-201ENST00000375499 GCOM2Q9BZD3 368 aaPredicted RBP17.41■□□□□ 0.38
SDHB-201ENST00000375499 MINDY3Q9H8M7 445 aa17.41■□□□□ 0.38
SDHB-201ENST00000375499 PCDHB7Q9Y5E2 793 aa17.41■□□□□ 0.38
SDHB-201ENST00000375499 PCDHB6Q9Y5E3 794 aa17.41■□□□□ 0.38
SDHB-201ENST00000375499 TBKBP1A7MCY6 615 aa17.4■□□□□ 0.38
SDHB-201ENST00000375499 DCXO43602 365 aa17.4■□□□□ 0.38
SDHB-201ENST00000375499 RFC5P40937 340 aa17.4■□□□□ 0.38
SDHB-201ENST00000375499 RARRES1P49788 294 aa17.4■□□□□ 0.38
SDHB-201ENST00000375499 DNM2P50570 870 aa17.4■□□□□ 0.38
SDHB-201ENST00000375499 ECHDC2Q86YB7 292 aa17.4■□□□□ 0.38
SDHB-201ENST00000375499 ZNF710Q8N1W2 664 aa17.4■□□□□ 0.38
SDHB-201ENST00000375499 PRPF31Q8WWY3 499 aaKnown RBP17.4■□□□□ 0.38
SDHB-201ENST00000375499 TMEM161AQ9NX61 479 aa17.4■□□□□ 0.38
SDHB-201ENST00000375499 PPME1Q9Y570 386 aa17.4■□□□□ 0.38
SDHB-201ENST00000375499 TRAPPC10P48553 1259 aa17.39■□□□□ 0.37
SDHB-201ENST00000375499 MRE11P49959 708 aa17.39■□□□□ 0.37
SDHB-201ENST00000375499 LAMTOR4Q0VGL1 99 aa17.39■□□□□ 0.37
SDHB-201ENST00000375499 ORC2Q13416 577 aaPredicted RBP17.39■□□□□ 0.37
SDHB-201ENST00000375499 CAMK1Q14012 370 aa17.39■□□□□ 0.37
SDHB-201ENST00000375499 COL19A1Q14993 1142 aa17.39■□□□□ 0.37
SDHB-201ENST00000375499 ECM1Q16610 540 aa17.39■□□□□ 0.37
SDHB-201ENST00000375499 POTEGQ6S5H5 508 aa17.39■□□□□ 0.37
SDHB-201ENST00000375499 OTUD6AQ7L8S5 288 aa17.39■□□□□ 0.37
SDHB-201ENST00000375499 ZNF598Q86UK7 904 aaKnown RBP17.39■□□□□ 0.37
SDHB-201ENST00000375499 FERMT3Q86UX7 667 aa17.39■□□□□ 0.37
SDHB-201ENST00000375499 CATSPER3Q86XQ3 398 aa17.39■□□□□ 0.37
SDHB-201ENST00000375499 ASAP3Q8TDY4 903 aa17.39■□□□□ 0.37
SDHB-201ENST00000375499 PSPC1Q8WXF1 523 aaKnown RBP17.39■□□□□ 0.37
SDHB-201ENST00000375499 PABPC5Q96DU9 382 aaKnown RBP17.39■□□□□ 0.37
SDHB-201ENST00000375499 MTRQ99707 1265 aa17.39■□□□□ 0.37
SDHB-201ENST00000375499 JPH2Q9BR39 696 aaPredicted RBP17.39■□□□□ 0.37
SDHB-201ENST00000375499 ELAC1Q9H777 363 aaKnown RBP17.39■□□□□ 0.37
SDHB-201ENST00000375499 ALG13Q9NP73 1137 aaKnown RBP17.39■□□□□ 0.37
SDHB-201ENST00000375499 MEIS3P2A8K0S8 358 aa17.38■□□□□ 0.37
SDHB-201ENST00000375499 ITGB1P05556 798 aa17.38■□□□□ 0.37
SDHB-201ENST00000375499 IL9P15248 144 aa17.38■□□□□ 0.37
SDHB-201ENST00000375499 DNAJB1P25685 340 aa17.38■□□□□ 0.37
SDHB-201ENST00000375499 IL17AQ16552 155 aa17.38■□□□□ 0.37
SDHB-201ENST00000375499 CLLU1OSQ5K130 101 aa17.38■□□□□ 0.37
SDHB-201ENST00000375499 LRRC55Q6ZSA7 311 aa17.38■□□□□ 0.37
SDHB-201ENST00000375499 CASD1Q96PB1 797 aa17.38■□□□□ 0.37
SDHB-201ENST00000375499 C11orf84Q9BUA3 381 aaPredicted RBP17.38■□□□□ 0.37
SDHB-201ENST00000375499 ATP6V0A4Q9HBG4 840 aa17.38■□□□□ 0.37
SDHB-201ENST00000375499 ANKEF1Q9NU02 776 aa17.38■□□□□ 0.37
SDHB-201ENST00000375499 NOL7Q9UMY1 257 aaKnown RBP17.38■□□□□ 0.37
SDHB-201ENST00000375499 PIN4Q9Y237 131 aaKnown RBP17.38■□□□□ 0.37
SDHB-201ENST00000375499 RWDD3Q9Y3V2 267 aa17.38■□□□□ 0.37
SDHB-201ENST00000375499 A0A0U1RQF3 1178 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 USO1O60763 962 aaKnown RBP17.37■□□□□ 0.37
SDHB-201ENST00000375499 RB1P06400 928 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 SRGAP2CP0DJJ0 459 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 ZSCAN20P17040 1043 aaPredicted RBP17.37■□□□□ 0.37
SDHB-201ENST00000375499 SFPQP23246 707 aaKnown RBP eCLIP17.37■□□□□ 0.37
SDHB-201ENST00000375499 MCM2P49736 904 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 CDC42EP1Q00587 391 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 PTGDRQ13258 359 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 TCEAL5Q5H9L2 206 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 MCTP1Q6DN14 999 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 KLHL23Q8NBE8 558 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 RNF149Q8NC42 400 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 RNF169Q8NCN4 708 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 LPPQ93052 612 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms