RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 OVOS2A0A0G2JMS6 1433 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 CYB5D1Q6P9G0 228 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 KRT35Q92764 455 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 LRRC59Q96AG4 307 aaKnown RBP10.85□□□□□ -0.67
PTCH1-204ENST00000375290 FTCDO95954 541 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 DSG1Q02413 1049 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 MKNK1Q9BUB5 465 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 TRPC5Q9UL62 973 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-204ENST00000375290 ZDHHC9Q9Y397 364 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 CPDO75976 1380 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 LPXNO60711 386 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 FDX1P10109 184 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 HOXB6P17509 224 aaKnown RBP10.85□□□□□ -0.67
PTCH1-204ENST00000375290 TAF12Q16514 161 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 ITPRIPL1Q6GPH6 555 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 TRAPPC11Q7Z392 1133 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 FBXL16Q8N461 479 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 PHACTR1Q9C0D0 580 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 XDHP47989 1333 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 DPH6Q7L8W6 267 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 RFX6Q8HWS3 928 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 TRIM63Q969Q1 353 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 ZNF496Q96IT1 587 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-204ENST00000375290 FUT8Q9BYC5 575 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 CDY2AQ9Y6F7 541 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 CDY1Q9Y6F8 540 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 TMEM247A6NEH6 219 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 FKBP6O75344 327 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 FAM47CQ5HY64 1035 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 PSPC1Q8WXF1 523 aaKnown RBP10.85□□□□□ -0.67
PTCH1-204ENST00000375290 EHD2Q9NZN4 543 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 RAB21Q9UL25 225 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 BASP1P80723 227 aaKnown RBP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 KBTBD12Q3ZCT8 623 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 CCNJLQ8IV13 435 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 GJA10Q969M2 543 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 BTBD6Q96KE9 485 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 TMEM51Q9NW97 253 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 CNOT7Q9UIV1 285 aaKnown RBP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 TYW5A2RUC4 315 aaKnown RBP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 MEIS1O00470 390 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 ACSL3O95573 720 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 PABPC4Q13310 644 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 DCAF15Q66K64 600 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 MFN1Q8IWA4 741 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 TMEM35BQ8NCS4 154 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 FLAD1Q8NFF5 587 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 WDR35Q9P2L0 1181 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 FRMD3A2A2Y4 597 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 PLA2G4BP0C869 781 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 KCNA3P22001 575 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 TNFRSF8P28908 595 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 AARSP49588 968 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 USP11P51784 963 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 THOC5Q13769 683 aaKnown RBP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 CEP55Q53EZ4 464 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 XPO6Q96QU8 1125 aaKnown RBP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 NACA2Q9H009 215 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 ZNF212Q9UDV6 495 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 L3MBTL1Q9Y468 752 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 A0A0G2JND7 137 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 HGSO14964 777 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 SNUPNO95149 360 aaKnown RBP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 OSBPL8Q9BZF1 889 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 TEKT2Q9UIF3 430 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 IQSEC2Q5JU85 1478 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 TNPO2O14787 897 aaKnown RBP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 ZBED1O96006 694 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 PTGISQ16647 500 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 DARS2Q6PI48 645 aaKnown RBP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 LCA5Q86VQ0 697 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 RASSF3Q86WH2 238 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 UNC5CLQ8IV45 518 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 TBCKQ8TEA7 893 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 KCNF1Q9H3M0 494 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 PPARGC1AQ9UBK2 798 aaKnown RBP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 EFCAB14O75071 495 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 FSBPO95073 299 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 SFNP31947 248 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 VSNL1P62760 191 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 PAPD7Q5XG87 772 aaKnown RBP10.84□□□□□ -0.67
PTCH1-204ENST00000375290 CYP4F22Q6NT55 531 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 THAP11Q96EK4 314 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 TTC26A0AVF1 554 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 PPIP5K2O43314 1243 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 TRAPPC3LQ5T215 181 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 NAA35Q5VZE5 725 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 CTNNAL1Q9UBT7 734 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 S100A5P33763 92 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 ICA1Q05084 483 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 XXYLT1Q8NBI6 393 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 IL17REQ8NFR9 667 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 TBC1D22BQ9NU19 505 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 SLC12A6Q9UHW9 1150 aa10.84□□□□□ -0.67
PTCH1-204ENST00000375290 TMED10P49755 219 aaKnown RBP10.83□□□□□ -0.67
PTCH1-204ENST00000375290 STILQ15468 1287 aa10.83□□□□□ -0.67
PTCH1-204ENST00000375290 ZNF589Q86UQ0 364 aaPredicted RBP10.83□□□□□ -0.67
PTCH1-204ENST00000375290 MRPL46Q9H2W6 279 aaKnown RBP10.83□□□□□ -0.67
PTCH1-204ENST00000375290 TRIM45Q9H8W5 580 aaPredicted RBP10.83□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms