RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 VPS72Q15906 364 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 PPP6R3Q5H9R7 873 aaPredicted RBP11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 C11orf57Q6ZUT1 292 aaPredicted RBP11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 GRAMD1CQ8IYS0 662 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 GPR101Q96P66 508 aaPredicted RBP11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 TEX13BQ9BXU2 312 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 POLR3FQ9H1D9 316 aaPredicted RBP11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 SLC9A2Q9UBY0 812 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 IP6K2Q9UHH9 426 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 ANAPC7Q9UJX3 599 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 OPHN1O60890 802 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 MFAP3LO75121 409 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 SMARCA1P28370 1054 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 GUF1Q8N442 669 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 ENAHQ8N8S7 591 aaPredicted RBP11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 ENC1O14682 589 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 KCNJ6P48051 423 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 CDO1Q16878 200 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 SWSAP1Q6NVH7 229 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 RHPN2Q8IUC4 686 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 BANK1Q8NDB2 785 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 ZMYND12Q9H0C1 365 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 ZWILCHQ9H900 591 aa11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 MRPL40Q9NQ50 206 aaKnown RBP11.85□□□□□ -0.51
PHACTR4-202ENST00000373839 H3BRJ5 948 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 COBLO75128 1261 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 GPD1LQ8N335 351 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 RAB42Q8N4Z0 105 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 HSPH1Q92598 858 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 ADAMTS1Q9UHI8 967 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 TARBP1Q13395 1621 aaKnown RBP11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 KBTBD13C9JR72 458 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 SMIM24O75264 130 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 CYP2D6P10635 497 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 MX2P20592 715 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 VAMP7P51809 220 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 YWHAHQ04917 246 aaPredicted RBP11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 COASYQ13057 564 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 ART3Q13508 389 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 RCN2Q14257 317 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 NFIXQ14938 502 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 CC2D1AQ6P1N0 951 aaPredicted RBP11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 TMEM270Q6UE05 265 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 TBC1D10CQ8IV04 446 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 WDR75Q8IWA0 830 aaKnown RBP11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 SLC16A10Q8TF71 515 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 FAM213AQ9BRX8 229 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 TRIM54Q9BYV2 358 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 PPP1R9AQ9ULJ8 1098 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 FNDC3AQ9Y2H6 1198 aaKnown RBP11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 SLC16A4O15374 487 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 MAGEB2O15479 319 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 PYGBP11216 843 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 SNAPC2Q13487 334 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 DUOXA2Q1HG44 320 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 SGMS1Q86VZ5 419 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 YAF2Q8IY57 180 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 FBXO41Q8TF61 875 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 CFAP36Q96G28 342 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 TEX12Q9BXU0 123 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 ADCY10Q96PN6 1610 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 SLC25A27O95847 323 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 CYBBP04839 570 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 RPS12P25398 132 aaKnown RBP11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 TAF1CQ15572 869 aaPredicted RBP11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 USP17L6PQ6QN14 398 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 MB21D2Q8IYB1 491 aaPredicted RBP11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 N4BP2L2Q92802 583 aaPredicted RBP11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 KIF2CQ99661 725 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 DYRK4Q9NR20 520 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 ASAP2O43150 1006 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 ESRRGP62508 458 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 SCYL3Q8IZE3 742 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 ZFYVE28Q9HCC9 887 aa11.84□□□□□ -0.51
PHACTR4-202ENST00000373839 KIF28PB7ZC32 967 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 M0QYV0 167 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 IFNAR2P48551 515 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 OCRLQ01968 901 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 PTK2BQ14289 1009 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 DACT3Q96B18 629 aaPredicted RBP11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 LXNQ9BS40 222 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 BFARQ9NZS9 450 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 HACL1Q9UJ83 578 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 UBN2Q6ZU65 1347 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 POTEMA6NI47 508 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 CPB1P15086 417 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 PKP1Q13835 747 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 XKR3Q5GH77 459 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 TTC8Q8TAM2 541 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 RPAP3Q9H6T3 665 aaPredicted RBP11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 PCDHB8Q9UN66 801 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 TULP4Q9NRJ4 1543 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 NEDD4P46934 1319 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 CTNND1O60716 968 aaKnown RBP11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 MXD4Q14582 209 aaPredicted RBP11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 XRRA1Q6P2D8 792 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 CRLF3Q8IUI8 442 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 KIRREL3Q8IZU9 778 aa11.83□□□□□ -0.52
PHACTR4-202ENST00000373839 ASIC4Q96FT7 647 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms