RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 LCMT1Q9UIC8 334 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 AFG3L2Q9Y4W6 797 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 SAMM50Q9Y512 469 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 PCDHGC5Q9Y5F6 944 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 CSADQ9Y600 493 aa9.51□□□□□ -0.89
SNRNP40-202ENST00000373720 SPATA31C2B4DYI2 1134 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 NFIBO00712 420 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 EXOC3O60645 756 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 HIP1RO75146 1068 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 NOL4O94818 638 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 PRPF6O94906 941 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 HOXC6P09630 235 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 NUDT7P0C024 238 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 RFC5P40937 340 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 FMO5P49326 533 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 SLC26A2P50443 739 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 AP3M2P53677 418 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 HADHBP55084 474 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 JAM2P57087 298 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 MRPS9P82933 396 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 POU5F1Q01860 360 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 DMP1Q13316 513 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 NEDD9Q14511 834 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 SHROOM1Q2M3G4 852 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 TDRD12Q587J7 1177 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 NBPF12Q5TAG4 269 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 SLFN12LQ6IEE8 588 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 FBXO38Q6PIJ6 1188 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 IRF2BP2Q7Z5L9 587 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 RIOX2Q8IUF8 465 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 GOLGA6L1Q8N7Z2 621 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 HPS3Q969F9 1004 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 DCPSQ96C86 337 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 FAM167AQ96KS9 214 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 IFT74Q96LB3 600 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 FIZ1Q96SL8 496 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 NAP1L3Q99457 506 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 SELENOOQ9BVL4 669 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 RAVER2Q9HCJ3 691 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 FBXO28Q9NVF7 368 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 APEX2Q9UBZ4 518 aa9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 ZNF214Q9UL59 606 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-202ENST00000373720 IRF6O14896 467 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 COBLO75128 1261 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 ATG7O95352 703 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 ZBTB7AO95365 584 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 MYBP10242 640 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 TNFRSF8P28908 595 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 HOXD13P35453 343 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 SNAP25P60880 206 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 MAPK7Q13164 816 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 RAPGEF1Q13905 1077 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 ZYXQ15942 572 aaKnown RBP9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 ANGEL2Q5VTE6 544 aaKnown RBP9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 TCERG1LQ5VWI1 586 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 SNRNP48Q6IEG0 339 aaKnown RBP9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 CC2D1AQ6P1N0 951 aaPredicted RBP9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 USP50Q70EL3 339 aaPredicted RBP9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 FASTKD5Q7L8L6 764 aaKnown RBP9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 HAUS6Q7Z4H7 955 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 MAP4K3Q8IVH8 894 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 RHOT2Q8IXI1 618 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 CPXCR1Q8N123 301 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 FBXO22Q8NEZ5 403 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 PIGOQ8TEQ8 1089 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 TAF4BQ92750 862 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 FAXDC2Q96IV6 333 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 PARD6BQ9BYG5 372 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 JPH1Q9HDC5 661 aaPredicted RBP9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 NRBP2Q9NSY0 501 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 CYP39A1Q9NYL5 469 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 GCNT4Q9P109 453 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 SLC9A2Q9UBY0 812 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 COQ4Q9Y3A0 265 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 GJA3Q9Y6H8 435 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 IGSF9BQ9UPX0 1349 aa9.49□□□□□ -0.89
SNRNP40-202ENST00000373720 NPHP3-ACAD11A0A0J9YXS1 232 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 K7ENM7 598 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 CHMP2AO43633 222 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 H2AFZP0C0S5 128 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 GZMAP12544 262 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 SOX5P35711 763 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 PBX2P40425 430 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 VAMP7P51809 220 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 CASP5P51878 434 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 BPIFB4P59827 614 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 ITGB3BPQ13352 177 aaPredicted RBP9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 BAATQ14032 418 aaPredicted RBP9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 SURF1Q15526 300 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 KIAA0753Q2KHM9 967 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 TBC1D10BQ4KMP7 808 aaPredicted RBP9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 CCDC181Q5TID7 509 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 FAM160B1Q5W0V3 765 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 ALKBH5Q6P6C2 394 aaKnown RBP9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 NSMFQ6X4W1 530 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 H2AFVQ71UI9 128 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 ERO1BQ86YB8 467 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 SULF1Q8IWU6 871 aa9.48□□□□□ -0.89
SNRNP40-202ENST00000373720 ANKRD13AQ8IZ07 590 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms